1. Browse the Database
  2. View Redoxidase
Entry information : GhPrx27
Entry ID 2012
Creation 2008-12-01 (Christophe Dunand)
Last sequence changes 2008-12-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2008-12-01 (Christophe Dunand)
Peroxidase information: GhPrx27
Name GhPrx27
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium hirsutum (upland cotton)    [TaxId: 3635 ]
Cellular localisation N/D
Tissue type Ovaries
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GhPrx27
start..stop		 S start..stop
GaPrx06 665 0 1..326 1..326
CclPrx36 524 0 10..326 4..327
RcPrx41 523 0 29..326 23..320
MePrx33 520 0 11..326 4..319
Literature and cross-references GhPrx27
Literature Yang,S.S., Cheung,F., Wei,N.E., Lee,J.J., Ha,M., Stelly,D.M., Thaxton,P., Sze,S.H., Triplett,B.A., Town,C.D. and Chen,Z.J. ESTs from immature ovule (-3 to 3 DPA) of G. hirsutum TM-1.
EST ref. GenBank:   DT572304 [5' end]  ES823547 [5' end]
Cluster/Prediction ref. UniGene:   Ghi.9864
Protein sequence: GhPrx27
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (298)
PWM (Da):   %s   35641.87 (32745.3)  
PI (pH):   %s   8.14 (8.19) Peptide Signal:   %s   cut: 31 range:29-326
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPSSLPQTP PSAVVIVLFL LFSTALLCES RLSLDYYSKT CPSFTKIMQD TITNKQITSP TTAAGALRLF FHDCLPNGCD GSILISSTAF NKAERDADIN LSLPGDPFDL IVRAKTALEL  ACPNTVSCSD ILAVATRDLV TMLGGPYYNV YLGRKDSRVS SASSLEGKLP KPTMSMSQLI NLFSSSGFTV QEMVALSGAH TIGFSHCKEF SSNISNDTHY NPRFAQALKQ ACSGYPNNPT 
LSVFNDIMTP NKFDNLYYQN LPKGLGLLES DHGLYGDPRT KPFVELYARD QNKFFQDFAK AMQKLSVYGI KTGRRGEIRH RCDAVN 

Retrieve as FASTA  
Remarks Complete sequence from 23 ESTs. cultivar="Texas Maker-1 (TM-1)", "Xu-142". 4 aa mismatches in DT571474, DT553916, DT570459, DT571279, DT551337, AI728054