Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
346 (324) |
PWM (Da): |
38047.3 (35645.9) |
|
PI (pH): |
7.72 (7.24) |
Peptide Signal: |
cut: 23 range:23-346 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MHSSLIKLGFLLLLIQVSLSHAQLSPSFYDKTCPQVFDIATTTIV NALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFFDAFAKAMIRMSSL SPLTGKQGEIRLNCRVVNSKSKIMDVVEDALEFASSM |
Retrieve as FASTA
|
|
Remarks |
complete sequence from genomic (chromo 4, 3 introns), 4 cDNA and 13 ESTs. |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGAAATGTTT TTCTTTAACA ATAAATAAAT TATCAATGTT GTCAAGATGT TATCTTTTTT TCTTACTTCC TTGTTTGTTT TGTGTTACTT ATTTAAATTC TATATAACTA TTAAACCTTG
AATCCATAAA TTATTTTTAC CTATAATGAA AGAAACATTA AATTATCAAT ACTAAGTAAT GGTCGTACGT CGATATTGTT GAACGTGGCG GATAAGTAAA ACGGGTTTTA CTTCTTCTTA
ATCTTACTTT CTCTATTGTA ATATGGTTAT ATACCTAAAT TAGTGTTTTC TCTTGAAGTT AGACATAGCT AGTGATAGCT ATTCACGTAA GTTTCTATAT ATGTTTATGT ATTCACATGA
AGTTTATAAA CTTATTGTAC ACGTTGATAA ATTTCAACAA TTATTGTAGA AAAAGGAAAA GAGTAATTAA GCAAATAATT AAAATCATAT ATATATATAT ATATATATAT ATATATATAT
ATTATGTAGT ACAAAGTAAT CATGTGCATA AAAGCGAGAA AAAAAAAACA CAGAGAATAA AGCGTAGGTC TTTAATCAAG TTGGATTATC CAAATCGTAA AACTATATTG GTTTTGTTAG
TCAAGAATAT AAAAATGAAT GTGTCGAACA CATACCGCTA CAAAGAAAAA ACAAACTATG TGCCTAAAAA CATTTTGCAT TGTTCACATA AACTCATATT TATCAATAAA TATAAGACAA
CTAAAGTTGA TGACCTAGTC AGTCTTTCAT ATGACACCAA AAGTCCCGAT TCCAACTCCG ATAAGATATA ATAAAATGGG TTGAAGAAAG CAAACCGGGT GCAAGTCAAA CCAAACATGT
TGATTTACTT CGTCAAATTA AAGAGGCTGC TCACTGTGTA ATATATGCAA TTTCGTAGTA GTTAACAGAT CCTTAATATA TTAGATAATT AAAAATATAA TGATTTATTT ACTTCAAACA
CTTTATGTCG TTAGTTTTGT TATTGTTACT ACAATATGTT
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCATTCCTCTTTGATAAAATTGGGATTTCTTCTTCTTCTTATTCAGGTATCATTGTCTCATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGACATTGCA ACCACTACCATTGTCAATGCTCTAAGATCGGACCCTCGCATCGCTGCAAGCATCCTTCGTCTTCATTTCCACGACTGCTTTGTTAATGTAAGATACCATTAGAATCAATATATTCATGTA TATTTTAACTCTTTTGGTTCCCTATAGTGTAGCCCTAATAAAGAGCGCGAGGGAATGCTTTATGGATATTATAAACTTGAAATTAGGATATAAAAATGTGATAGACTTTTTGTTTTGTTG TTCGACTCAAATAGTTTGTTTCATGGTTTATTCATTTCAAACTGTGAAATTATTTTGGTAGTTTTGTTATTGAAATTTTGGCTTTCTTTTAGTTAGTTAAAAAATTGAAAAAAACAGGAA TGAAAGAAATTTACAAAAACAATAGAAATTTACTTTTACATACAAAATTTATGTCTTTTTAGTTAAATTATTTTTTTGGAAGTTTGATTATACTTATTTTGACTAGTTTTGGTTGAATTA TGGAGACTGGAGAGGCTATATATAAAATGGACCAACAACTTCTCAAAGACATTAATTTGATATTATTAGTACAAGTCTACATAGATTGTAGTGCTTTCTTATCTCGAGTTTCAGATTCTG TGTCAAAGTATGCTCGAAGATGTTTATAGTGAACTCATATTTTTTGGATTTCAAATATTCTGTCTTCGGATTCACGTGAAAAGATTATGCTATCGATAGTGTGATACATGTAGTAGTATA ACTTGTTTATATTTAAATTCAAAGAATCTAAGATCAACTGTTTACGGATGTTAAGATTTTCTTTATGTAAACAATGTTGTTAGTTACTAAATGTGAAGAAAAATATTTTGTTTTGAAAAA GGGGGATGTGATGCATCGATATTGTTAGACAACACCACATCGTTTAGGACGGAGAAAGATGCGTTTGGGAACGCTAATTCCGCTCGAGGTTTCGATGTGATCGACAAAATGAAGGCTGCC GTGGAGAAAGCATGTCCTAAAACTGTTTCATGTGCTGATTTGCTCGCCATCGCGGCTCAAGAATCTGTCGTTTTGGTATGCATCTTTTACTATGCTATCCAAATGGTTTCTAGACCATTT TGTTTAATTTATAAGGAAGATGAGAGATAATTAGACCAAATATAATTGTTACTTTAGGCGCGGGAGGTCCTTCATGGAGGGTTCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTCATGG ATCTTGCTAATGATAACCTTCCAGCTCCATTCTTTACCCTTAACCAACTTAAGGATAGATTCAAAAACGTCGGACTCGACCGTGCTTCTGATCTCGTTGCTCTTTCTGGTACGTTATTTC GTTGGCAACATTTTCATCTATAGTTGTAGTCACTAATAACTCAATATGATTATTGGTCAAGTTTATTTATTCGTTCTATATTTTCATTTGGTTAGGTGTGGTCACACCTTTGGCAAAAAC CAATGTCAATTCATAATGGATCGGCTTTATAACTTCAGTAACACTGGTTTACCCGACCCAACCCTTGATAAATCTTACCTCTCCACACTCAGAAAACAATGTCCACGTAATGGAAACCAG AGTGTATTGGTAGATTTTGATTTACGTACGCCAACACTCTTTGACAACAAGTATTATGTGAACCTCAAGGAGAACAAAGGACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGAT GCTTCAGACACTCTTCCTTTAGTCCGAGAATACGCTGATGGTCAAGGGAAATTTTTCGATGCGTTCGCGAAGGCAATGATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAACAAGGA GAAATAAGATTGAACTGTAGAGTGGTGAATTCGAAATCTAAAATCATGGATGTGGTAGAAGATGCTCTTGAATTTGCAAGCTCAATGTGA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGCATTCCTCTTTGATAAAATTGGGATTTCTTCTTCTTCTTATTCAGGTATCATTGTCTCATGCTCAACTAAGCCCTTCCTTTTACGATAAAACATGTCCGCAAGTCTTTGACATTGCA ACCACTACCATTGTCAATGCTCTAAGATCGGACCCTCGCATCGCTGCAAGCATCCTTCGTCTTCATTTCCACGACTGCTTTGTTAATGGATGTGATGCATCGATATTGTTAGACAACACC ACATCGTTTAGGACGGAGAAAGATGCGTTTGGGAACGCTAATTCCGCTCGAGGTTTCGATGTGATCGACAAAATGAAGGCTGCCGTGGAGAAAGCATGTCCTAAAACTGTTTCATGTGCT GATTTGCTCGCCATCGCGGCTCAAGAATCTGTCGTTTTGGCGGGAGGTCCTTCATGGAGGGTTCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTCATGGATCTTGCTAATGATAACCTT CCAGCTCCATTCTTTACCCTTAACCAACTTAAGGATAGATTCAAAAACGTCGGACTCGACCGTGCTTCTGATCTCGTTGCTCTTTCTGGTGGTCACACCTTTGGCAAAAACCAATGTCAA TTCATAATGGATCGGCTTTATAACTTCAGTAACACTGGTTTACCCGACCCAACCCTTGATAAATCTTACCTCTCCACACTCAGAAAACAATGTCCACGTAATGGAAACCAGAGTGTATTG GTAGATTTTGATTTACGTACGCCAACACTCTTTGACAACAAGTATTATGTGAACCTCAAGGAGAACAAAGGACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGATGCTTCAGAC ACTCTTCCTTTAGTCCGAGAATACGCTGATGGTCAAGGGAAATTTTTCGATGCGTTCGCGAAGGCAATGATAAGGATGAGTAGTCTTTCACCTTTAACAGGGAAACAAGGAGAAATAAGA TTGAACTGTAGAGTGGTGAATTCGAAATCTAAAATCATGGATGTGGTAGAAGATGCTCTTGAATTTGCAAGCTCAATGTGA |
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
TCACTCAAAT TAAACCATAA CCAAATAATT CTCTTAAAAG AGCTAAGAAA ATGCATTCCT CTTTGATAAA ATTGGGATTT CTTCTTCTTC TTATTCAGGT ATCATTGTCT CATGCTCAAC
TAAGCCCTTC CTTTTACGAT AAAACATGTC CGCAAGTCTT TGACATTGCA ACCACTACCA TTGTCAATGC TCTAAGATCG GACCCTCGCA TCGCTGCAAG CATCCTTCGT CTTCATTTCC
ACGACTGCTT TGTTAATGGA TGTGATGCAT CGATATTGTT AGACAACACC ACATCGTTTA GGACGGAGAA AGATGCGTTT GGGAACGCTA ATTCCGCTCG AGGTTTCGAT GTGATCGACA
AAATGAAGGC TGCCGTGGAG AAAGCATGTC CTAAAACTGT TTCATGTGCT GATTTGCTCG CCATCGCGGC TCAAGAATCT GTCGTTTTGG CGGGAGGTCC TTCATGGAGG GTTCCAAATG
GAAGAAGAGA CAGCTTAAGA GGGTTCATGG ATCTTGCTAA TGATAACCTT CCAGCTCCAT TCTTTACCCT TAACCAACTT AAGGATAGAT TCAAAAACGT CGGACTCGAC CGTGCTTCTG
ATCTCGTTGC TCTTTCTGGT GGTCACACCT TTGGCAAAAA CCAATGTCAA TTCATAATGG ATCGGCTTTA TAACTTCAGT AACACTGGTT TACCCGACCC AACCCTTGAT AAATCTTACC
TCTCCACACT CAGAAAACAA TGTCCACGTA ATGGAAACCA GAGTGTATTG GTAGATTTTG ATTTACGTAC GCCAACACTC TTTGACAACA AGTATTATGT GAACCTCAAG GAGAACAAAG
GACTTATCCA GAGCGACCAA GAGTTATTCT CTAGCCCTGA TGCTTCAGAC ACTCTTCCTT TAGTCCGAGA ATACGCTGAT GGTCAAGGGA AATTTTTCGA TGCGTTCGCG AAGGCAATGA
TAAGGATGAG TAGTCTTTCA CCTTTAACAG GGAAACAAGG AGAAATAAGA TTGAACTGTA GAGTGGTGAA TTCGAAATCT AAAATCATGG ATGTGGTAGA AGATGCTCTT GAATTTGCAA
GCTCAATGTG AGGAAATGTT TTTCTTTAAC AATAAATAAA TTATCAATGT TGTCAAGATG TTATCTTTTT TTCTTACTTC CTTGTTTGTT TTGTGTTACT TATTTAAATT CTATATAACT
ATTAAACCTT GAATCCATAA ATTATTTTTA CCTAT
|
Retrieve as FASTA
|
|