View Redoxidase 7488

Entry information : AlyPrx37

Entry ID	7488
Creation	2010-08-10 (Christophe Dunand)
Last sequence changes	2010-08-12 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2010-12-24 (Marie Brette (Scipio))

Peroxidase information: AlyPrx37

Name

AlyPrx37

Class

Class III peroxidase [Orthogroup: Prx040]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis lyrata [TaxId: 59689 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AlyPrx37 start..stop	S start..stop
AtPrx37	657	0	14..345	15..346
AhalPrx27	654	0	15..345	16..346
BstrPrx36	648	0	1..345	1..344
AlyPrx38-2	648	0	15..345	16..346

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	18894845..18895048	202	N° 2	18894340..18894531	190	N° 3	18894067..18894235	167	N° 4	18893485..18893957	471
complement(join(18893485..18893957,18894067..18894235,18894340..18894531,1889484 5..18895048))

Literature and cross-references AlyPrx37

DNA ref.	Phytozome 12: scaffold_6 (18895048..18893485)

Protein sequence: AlyPrx37

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	345 (324)
PWM (Da):	38020.41 (35732.1)	Transmb domain:	i7-26o
PI (pH):	8.57 (8.39)	Peptide Signal:	cut: 22 range:22-345

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MHSSLIKLGFLLLLQVSLSHAQLSPSFYDKTCPQVFDIVTNTIVN
ALRSDPRIAASIIRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPRTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANNNLPAPSFTLKQLKDRFKNVGLDRASDLVALSGGHTFGKNQCRFIMDRLYNFSDTGLPDPTLDKSYLTTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREFADGQGKFFDAFAKAMIRMSSL
SPLTGKQGEIRLNCRVVNSKPRIMDVVEDAIKFASSM

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 6, 3 introns)

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGCATTCCTCTTTGATAAAATTGGGATTTCTTCTTCTTCTTCAGGTCTCATTGTCTCATGCTCAACTAAGCCCTTCCTTTTATGATAAAACATGTCCGCAAGTCTTTGACATTGTAACC
AATACCATTGTCAATGCTCTGAGATCAGACCCTCGCATCGCTGCAAGCATCATTCGTCTTCATTTCCACGACTGCTTTGTTAATGTAAGATACCATTAGATTCAATATATTCATGTATAT
GTTAACTCTTTTGGTTCCCTATAGTTTATCCTAAAGAGTTATACGGATATAATAAACTACTACATGGCGAATTAATGCTGCCTTCGGATTCACGTAAATAAAGTTATGCTATCGATAGTT
GGATACTAGATTTACTATTTTTCTTGCAGTAAAAGGAGAAAAAAAATTAGCAGTAGATATAACTTGTTTATATAAAAATTGAAAGAGACTAATTAAGATCAACTGTTTACGGATGTTAAG
ATTTTTTTTATTTAACAATATTTTGTTTTTTAAAAAGGGGGATGTGATGCATCGATATTGTTAGACAACACCACATCGTTTAGGACGGAGAAAGACGCCTTTGGGAACGCTAATTCCGCT
CGAGGTTTCGATGTGATCGACAAAATGAAGGCTGCCGTAGAGAAAGCATGTCCTAGAACTGTTTCATGTGCTGATTTGCTCGCCATCGCAGCTCAAGAATCTGTTGTTTTGGTATGCATC
TTTTACTATGCTATGCAAATGGTTTCTAGAGTACCATTTTGTTAACTTTTTAAGGAGGATAAAGTATTTAGACCAAATATAATTGTTTACTTTAGGCGCAGGAGGTCCTTCATGGAGGGT
TCCAAATGGAAGAAGAGACAGCTTAAGAGGGTTTATGGATCTTGCTAATAATAACCTTCCAGCTCCATCCTTTACCCTTAAACAACTTAAGGATAGATTCAAAAATGTCGGACTCGACCG
TGCTTCTGATCTCGTTGCTCTTTCCGGTACGTTATCATTGGAAACATTTTCACGTATAGCTGTAATAACTAATATCTCTATATGATAGATTATTGGTCTAGTTTATTTATACTTTTGATA
TTTTTCTTTGGTTAGGTGTGGTCACACTTTTGGCAAAAACCAATGTCGGTTCATAATGGATCGGCTTTACAACTTCAGTGACACCGGTTTACCCGACCCAACCCTTGATAAATCTTATCT
CACCACACTCAGAAAACAATGTCCGCGTAACGGAAACCAGAGTGTCTTGGTAGATTTTGATTTACGTACACCAACACTCTTTGACAACAAATACTATGTGAATCTCAAAGAGAACAAAGG
ACTTATCCAGAGCGACCAAGAGTTATTCTCTAGCCCTGATGCTTCGGACACTCTCCCTTTAGTCCGAGAATTCGCTGATGGTCAAGGAAAATTTTTCGATGCGTTCGCGAAGGCAATGAT
AAGGATGAGTAGTCTTTCACCTTTAACAGGGAAGCAAGGAGAAATAAGATTGAATTGTAGAGTGGTGAATTCGAAACCGAGAATCATGGATGTGGTAGAAGATGCTATTAAATTTGCTAG
CTCAATGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA