View Redoxidase 2480

Entry information : TcrAPx-CcP02

Entry ID	2480
Creation	2006-12-21 (Christophe Dunand)
Last sequence changes	2012-06-19 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-06-19 (Christophe Dunand)

Peroxidase information: TcrAPx-CcP02

Name

TcrAPx-CcP02

Class

Hybrid Ascorbate-Cytochrome C peroxidase [Orthogroup: APx-CcP001]

Taxonomy

Eukaryota Trypanosomatidae Trypanosoma

Organism

Trypanosoma cruzi [TaxId: 5693 ]

Cellular localisation

Cytosolic

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	TcrAPx-CcP02 start..stop	S start..stop
TcrAPx-CcP01	676	0	1..328	1..328
LmexAPx-CcP01	406	1.57e-143	18..325	3..300
LbraAPx-CcP	400	3.64e-141	32..325	12..302
LseyAPx-CcP1	400	4.64e-141	34..324	33..321

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2480' 'join(13736..14722)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	13736..14722	985
join(13736..14722)

Literature and cross-references TcrAPx-CcP02

Literature	El-Sayed N.M., Myler P.J., Blandin G., Berriman M., Crabtree J. et al. "Comparative genomics of trypanosomatid parasitic protozoa" Science 309:404-409 (2005)
Protein ref.	UniProtKB: Q4D2P4
DNA ref.	GenBank: AAHK01001145.1 (13736..14722)

Protein sequence: TcrAPx-CcP02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	328
PWM (Da):	36408.79
PI (pH):	7.44

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MVFCFGSFFS KYASSKSGFQ ARYRFLHSSA KIAAGATGAL LLGGATVALC YFPSGQKVTE APPFDVNSLR RDIEEILSED MSKGPLFVRL AWHEAGSWDC RKKDGSPNSA SMRFHPECSY AGNKGLDKGR NALESLKKKY PKISYADLWS FAAVVSIEAM GGPEIPWRWG RVDAKDGSVC GPDGRLPDAS RMQDHVRDVF SRLGFNDEET VALIGAHTCG ECHLENTGYV GPWTHDKYGF
DNSFFTELFG NEWMLNPNVK KMQFMDKTTN RLMMLPADVS ILLDDKYRSI AKKYADDNDY FCNAFSKAYQ KLLEVGTTNL KSLPAESK

Retrieve as FASTA

Remarks

Complete sequence from genomic (no intron). Annotated as Ascorbate peroxidase (unspecific ascorbate peroxidase activity!!!), but the sequence contains CcP motifs.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGTTTTTT GTTTTGGTTC ATTCTTTTCG AAGTACGCTT CATCCAAATC AGGTTTTCAG GCAAGGTACC GTTTTCTTCA TTCCTCGGCT AAAATTGCTG CTGGCGCCAC CGGTGCATTG CTTTTGGGCG GTGCCACCGT GGCCTTATGT TATTTTCCCT CGGGACAAAA GGTCACGGAG GCACCCCCGT TTGATGTGAA CTCACTAAGA AGGGACATTG AAGAAATACT CTCCGAGGAC ATGTCTAAAG GACCTCTTTT TGTGCGACTC GCGTGGCACG AGGCTGGATC ATGGGACTGC CGGAAAAAGG ATGGGAGTCC TAATTCCGCT TCGATGCGAT TTCACCCAGA GTGCAGCTAT GCCGGCAACA AAGGGCTTGA TAAAGGACGA AATGCGCTGG AATCGCTCAA GAAAAAGTAC CCGAAAATTT CATACGCCGA TTTATGGTCC TTCGCAGCGG TGGTGTCGAT TGAGGCGATG GGCGGCCCGG AGATTCCGTG GCGGTGGGGG CGCGTGGATG CAAAGGACGG CAGCGTTTGT GGCCCCGATG GGCGTCTCCC TGACGCATCC AGGATGCAGG ATCACGTGCG GGATGTCTTT TCACGTCTTG GCTTTAATGA TGAAGAAACT GTTGCCTTGA TCGGGGCCCA CACATGTGGT GAGTGCCATC TGGAGAACAC GGGCTACGTG GGTCCGTGGA CGCACGACAA GTACGGCTTT GACAACTCCT TTTTTACGGA GCTTTTTGGC AACGAGTGGA TGCTGAACCC CAATGTGAAG AAAATGCAGT TCATGGACAA AACCACTAAT CGCCTTATGA TGCTGCCCGC TGATGTTTCC ATTCTTCTGG ACGACAAATA TCGCTCCATC GCGAAGAAGT ACGCGGACGA CAATGATTAT TTTTGCAACG CCTTCAGCAA GGCTTATCAG AAGTTGCTTG AGGTTGGAAC CACCAATCTC
AAGTCTCTCC CAGCAGAGTC AAAATAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA