View Redoxidase 2499

Entry information : AtGPx01 (At2g25080 / ATGPX1 / GPX1)

Entry ID	2499
Creation	2006-06-14 (Marcia Pinheiro Margis)
Last sequence changes	2015-06-02 (Christophe Dunand)
Sequence status	complete
Reviewer	Achraf Jemmat
Last annotation changes	2015-11-12 (Achraf Jemmat)

Peroxidase information: AtGPx01 (At2g25080 / ATGPX1 / GPX1)

Name (synonym)

AtGPx01 (At2g25080 / ATGPX1 / GPX1)

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

Chloroplastic

Tissue types

Flowers
Green siliques
Hypocotyls
Leaves
Mixed tissues
Rosettes
Seedling shoots
Seeds
Siliques

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtGPx01 start..stop	S start..stop
AlyGPx01	470	2.43e-171	1..236	1..236
BnGPx01_other	409	3.18e-147	4..236	1..236
ThasGPx01	370	7.91e-132	1..236	1..235
AtGPx07	357	8.07e-127	10..236	4..233

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	10668134..10668388	253	N° 2	10668704..10668780	75	N° 3	10668875..10668936	60	N° 4	10669355..10669473	117
N° 5	10669546..10669713	166	N° 6	10669799..10669828	28
join(10668134..10668388,10668704..10668780,10668875..10668936,10669355..10669473 ,10669546..10669713,10669799..10669828)

Literature and cross-references AtGPx01 (At2g25080 / ATGPX1 / GPX1)

Literature	Gachotte,D. and Benveniste,P(1996). The electronic Plant Gene Register. Plant Physiol. 110 (2), 713-714.
Protein ref.	UniProtKB: P52032
DNA ref.	Phytozome 12: Chr2 (10668134..10669828)
mRNA ref.	GenBank: X89866.1
Cluster/Prediction ref.	Phytozome Gene 12: 19639809 UniGene: At.24670
Omic ref.	ePlant: At2g25080 TAIR: At2g25080

Protein sequence: AtGPx01 (At2g25080 / ATGPX1 / GPX1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	236
PWM (Da):	25928.3	Transmb domain:	i17-34o
PI (pH):	9.94

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVSMTTSSSSYGTFSTVVNSSRPNSSATFLVPSLKFSTGISNFANLSNGFSLKSPINPGFLFKSRPFTVQARAAAEKTVHDFTVKDIDGKDVALNKFKGKVMLIVNVASRCGLTSSNYSE
LSHLYEKYKTGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDVDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQKLLAA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 2, 5 introns), 5 cDNAs and 60 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AAGAATGTGT GTAATCGTCA TTGTAAACAG CAAAATTACA GAAGAATTTA ACTAGTTGTG TATTTGCTAT ATGTAGACCA TTAGTATTTT GTCATCTTAA CTTTCATATA AACTGGTTTT GTCGTTGGCT AAAAGTATAT TAAAAATTTT AAACAGAAAA AGAGTATTAT GGTAGGATAA ATTGCAAAAA CAAATTAACA TATGCTAGTT TTTACCTGGC ATTTAACAAA ATTTATGATT TCTGTTTTTA TATCGAACAT ACATAGTTTC ATGATACAAT CAATTTTTGC ACTTAGGTAT GTGAAGTAAT AGAAATGGAA GAAAAAAATA CAAGAAAAAG GAACTTCAGA AGATTTTTTG TCTCCAAGTG AAAGCCGGTC CTTAGTTTTG AGAGGCTTGA AGCACAAAAA TAATTATGTG GTCTATCAAA TATTTACGAC TTAAATATTG TATTACAACA TTATTAACAT TTAAATATCT TAAATAGCTA AAAATATAAT ATTTTTGACT TTCAATGAGG CAAGGAACTC TCGAGAGAGG TCTTCCTAGA CCCATGTTGG TGAAGATAGC TTCGACGTCT TCTAAAAGCA CCTCCATCGA TTATATTAAC GAGTGTTTAT ACTATTTTTT TTTAATATAA ATTTGAAATA TTTGTGAAAG GAGAAAAGAG AAGAAACATA TGTTAAAGAC ACTTTTTACT TACATGTCAC TTTTTGATTG GGTTTAATAT TTTTACAATT TATTGATTAA AATTTTAATC TAACTTAAGA CACTTCACTT TGATCACCGG TGCAGATACT TTAAGAGCCT CGCTTCACGA AGAAAAACCG AATCGGAATA ACGAGTGGGA GTGAATTCGG TGAGCATGTA AGTATCACCC TCATCGCATA AAACCTCCTT AGCTTCAATT TCGAAAAGGG AATTGTTATA TACTGATTGA ACAAAATAAA GATATTCTAT AGTAAACACA TGTTATATAG AACAACATTT GAGATTGATA TTGTAATAAT GGAGAGAGGT AGCTTCTAAT GAGTATACTA CTAAAGTACT AATAAGAAAA CTAAATTTGG CTGTCACATC TTATCTATTT GTTTATGTGG CCCAACATTT CCAATATATA TTACAAAATA ATAATAATGG ATAGGCATTG CCACCGGTTA GATTATAACT CTTCGTTTGA GTGCGACATA TTTGTAACCA GAGACAATAA TTAGGATAAG GATTGAACCA AGGAACTAAA CAAAAATTTG AGGATGAAAC ATAGTCCAAA ACAAAATCCA TTTAATTTTT GGGACAAGAA CATAGATATC ATAACACTTA AATATGTGCC TCAAATTGGT CCAAAATGCT CTCGTGAATG AACGTGGATT TTGCACCACT CAACTTAATT ACTTACTTTG TCCCATTTAA AAAAAAAAAA TTATAAAAGC AAAAATATTA AGGAAAATTT TTCATTATAA AAATATCATC TAATATTTTA ATTTAAAACC CTACCATAAA TCATAGAAAA TACTGCAGCA TATAAATAAT CATAAAATTA AATAGAATTT TACAGTGATT TCATATAAAA TACTACAGAA GATAAATAAT CATAAAATAA ATATAATTTT GCAGTAATTT CATAGAATAA AATGCTCCAG AATTTAAGTA ATCATAAGAA ATCTAATAAG CATTTTGTAA ATAAAAAAAT CCAACTTTGT CTCCAATTGA ATTCTGCAAA AAATCCAACT ATACTGCAAA ACAAATTCCA ATTATGTCTC CAAAACGAAT TTGAAAACAA ATTGTGAAGA AAAATATCAT TATATTTTTT GTAAAGTAAA TAAAATTAAA AACACATTTA TGGTCCAAAA ATTTAGTTTT TTTTGTTTTT TTAGTTAATG TGTATTTTGG CATGATATAA AGTGCGTCGT GTCTCGACTA
TATCATCTCT CGGTTTCACT ATTGAACGTG TAACACTGGT CGAAAGAAGA CGAACATAAA CTCGTCTCCG GTAACCAAAA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

AAACTTTTGC TCATGAGTGA GCATATAGAG ACTGATGGTT AAAGTAACCG TAAATTGTGA CATAAAGTTT CCGGTTATTG CTTGTATACC TTCTTACATT CTAAGTTGTA CTAATCGCTT AATAATTTGC GTATAATGGT AATGTTATAT ACATTATATT ATAAAAATGG TGTTATATAT ACAATAAGAC AATCTCGCTC GCGCACATCC AATCAACAAC GATGGAGATG ATATTACAAA AAAAAGCATT GAACCCTTCA CCTCTTACAT TTCAAAGTGT TTATTAAACT AGATTAGTTA CAGTTCCTTA TGTAAAAATT CAAATATTTA TAGTTTAGTG GGTGCACCAA CGTGAGTCCG CCCTACTTAA TCTTATATAC ATTATTTTAT TGAATTTGAA AAGTAATCCG CAATATAACC CTTGAACGTG TATAGATTTT GTAAACCGTA TAAGTTTGTA TATAGATTAA CAAAACTACT TCGCTTTGAA CACTTGAAAA AAAAAAAAAA TGAGAAGTAG ACTCGAACTA ATGACCTATA GAACGTTCAT AACATATATA ACCAATTTTG CTTCAATAGT TTTTGACAAT TGTACAAACC CTCCAAGTAA TTTTTATTGT TAATCATAAA AAAAATGTTC TTATACATTT GCAATTTCAC AATAAGACAG TCTCGCCTCG CACATCCAAT TCCAAAAAGT GAATTATTAC AGCTCATGAA ACATTATTTA TTTTGTTATC ATTTGTGTCA ACATTATCAT TAGTGGTAAC ATCGTCTTCA TCATCATCAC CTTGCCATGA CCATACAATG TCTTTAAGAG CTGGTCTGAC GTCATCCTCA CAGAAGAGGT AATACTCCAA CGTATCCCCC GAGGTTTTGC AGAACTCCAC GACAGAGACT TCAGGAGCGA CTTCGAATAC TTCCGCCGTC ACCGAGAGCC TTCCTTTACG ACCTTCTGTT
CTTCTTTGCA GCTTCATCTT GCAGTCTTTT ACATGTTTCA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTTTCCATGACTACTTCATCTTCTTCGTACGGAACATTCTCTACAGTCGTCAACAGTTCTAGACCTAATTCCTCAGCAACCTTTCTCGTCCCTTCCTTGAAATTCTCCACCGGAATA
TCGAATTTCGCGAATCTGAGTAATGGGTTTTCTCTAAAATCTCCAATTAATCCTGGGTTTCTCTTCAAGTCTCGTCCTTTCACTGTCCAAGCTAGAGCTGCTGCAGAAAAAACCGTTCAC
GATTTCACCGTTAAGAGGTTTGGTTCTTATTCTTTTACCCAATTCAGACCAAAAACTAGGGTTCTCTAAATTCTATCTGCTCTTTAGTAAATTGGGAATCTTCAACTTTGCAATGAAGTT
CATAGTGATTTCAATTGAGACATACATAAAAATCTGAAATTTGAGACATAAGTGTATGGTGATTTCAACTTGATACATACTTAGATTCATATTTTTATTGAATTTCGTAGTGTATATTTA
TACTTTTTTTTTTTGAAAAAAGGTGTATATTTATACTTAGGTTAGTGATTTCAATTAGAGACATAATTAGATTGTTATTTTTATGGAGGCAGGACATTGATGGGAAGGATGTTGCTTTGA
ACAAATTCAAGGGGAAAGTTATGTTGATTGTCAATGTTGCTTCAAGATGTGGTAAGCTTCTCCTTCTTCATCCTCTTGATGTGTTTGATGACAGTTCATGTAGAGGTTTCTAATCTTAAA
GATTGTGTGTTTTATGAACATACAGTGGTTTGACATCATCAAATTACTCAGAGCTTTCACATCTGTACGAGAAATACAAAACTCAAGAGGTGAGTTCTAATTAGTTCTCTCATATTGTGA
TCTATTCCGGTTTGCAACCAGTGGGTATTTTGGTTACTTACTGAAAATTCCTCGTGTTTTGGTGTTCACTTAATTGTTCTGTAGATCTTTATATTATTGTGGTGTCAATATGATTTGGTT
CTATTGTTGCTTCTTCTACAGCGATGTTACTAGCTCGTAGTTCACTTTAATTTATGGAAATAAAATTGTTCTGTAACGTTGAACTGCAAGCAAATTCAGCATCTTTGTTTGATTGATGAT
AATCTCACTCATCCGTTCTCTGTAGCTAAAAGAATTTTCTCGAAAGTACGGATCTGTTCATTAATCATTTAGGAGGCAATAAGCCAATGAACGTGTATTTCTCATGCATTTGTAGTTAGT
AATACTAGCTTGTTGTTTGGATTACAGGATTTGAGATTCTAGCTTTTCCCTGCAATCAGTTTGGTTTCCAAGAGCCCGGGTCAAACTCCGAGATCAAACAATTCGCTTGCACCCGGTTTA
AAGCAGAGTTCCCTATATTTGATAAGAGGTATAAAGAATCCAAAACATTCATTCTTCTTATTTTCAGGTTGCAGATTCTAAATAAGTTTGAATTCGACAGGTTGACGTGAATGGACCAAG
CACAGCGCCGATCTACGAGTTCTTGAAATCAAACGCAGGAGGATTCTTGGGTGGTCTCATTAAATGGAACTTTGAGAAGTTCTTGATTGATAAAAAGGGAAAGGTCGTTGAGAGGTACCC
TCCCACCACATCCCCTTTCCAAATCGAGAGGTATGGCTAATGGACTACTTCCTATTTGGTTCATAGCGGTTCTATTCCCGGTTTGTAACCAAACCGTTTTGTTTCTGTTTTGCAGAAAGA
CATCCAGAAGTTGCTTGCCGCTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GACTATATCA TCTCTCGGTT TCACTATTGA ACGTGTAACA CTGGTCGAAA GAAGACGAAC ATAAACTCGT CTCCGGTAAC CAAAAATGGT TTCCATGACT ACTTCATCTT CTTCGTACGG AACATTCTCT ACAGTCGTCA ACAGTTCTAG ACCTAATTCC TCAGCAACCT TTCTCGTCCC TTCCTTGAAA TTCTCCACCG GAATATCGAA TTTCGCGAAT CTGAGTAATG GGTTTTCTCT AAAATCTCCA ATTAATCCTG GGTTTCTCTT CAAGTCTCGT CCTTTCACTG TCCAAGCTAG AGCTGCTGCA GAAAAAACCG TTCACGATTT CACCGTTAAG GACATTGATG GGAAGGATGT TGCTTTGAAC AAATTCAAGG GGAAAGTTAT GTTGATTGTC AATGTTGCTT CAAGATGTGG TTTGACATCA TCAAATTACT CAGAGCTTTC ACATCTGTAC GAGAAATACA AAACTCAAGG ATTTGAGATT CTAGCTTTTC CCTGCAATCA GTTTGGTTTC CAAGAGCCCG GGTCAAACTC CGAGATCAAA CAATTCGCTT GCACCCGGTT TAAAGCAGAG TTCCCTATAT TTGATAAGGT TGACGTGAAT GGACCAAGCA CAGCGCCGAT CTACGAGTTC TTGAAATCAA ACGCAGGAGG ATTCTTGGGT GGTCTCATTA AATGGAACTT TGAGAAGTTC TTGATTGATA AAAAGGGAAA GGTCGTTGAG AGGTACCCTC CCACCACATC CCCTTTCCAA ATCGAGAAAG ACATCCAGAA GTTGCTTGCC GCTTAAAAAC TTTTGCTCAT GAGTGAGCAT ATAGAGACTG ATGGTTAAAG TAACCGTAAA TTGTGACATA AAGTTTCCGG TTATTGCTTG TATACCTTCT TACATTCTAA GTTGTACTAA TCGCTTAATA ATTTGCGTAT AATGGTAATG TTATATACAT TATATTATAA
AAATGGTGTT ATATATACAA TAAGACA

Retrieve as FASTA