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Entry information : BnaCcP01
Entry ID 2510
Creation 2005-12-28 (Nenad Bakalovic)
Last sequence changes 2012-01-17 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-06-04 (Christophe Dunand)
Peroxidase information: BnaCcP01
Name BnaCcP01
Class Cytochrome C peroxidase    [Orthogroup: CcP011]
Taxonomy Eukaryota Bigelowiella
Organism Bigelowiella natans    [TaxId: 227086 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnaCcP01
start..stop		 S start..stop
EUgAPx-CcP03 299 1.19e-102 33..288 3..247
EgraAPx-CcP01 298 3.35e-97 24..288 130..384
EgraAPx-CcP01 283 1.94e-91 30..292 393..645
CspCcP03 270 3.23e-90 26..288 52..308
EhuxAPx-CcP04 268 4.79e-90 26..290 2..257
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 328093..328258 164 N° 2 327746..328007 260 N° 3 327537..327615 77 N° 4 327345..327446 100
N° 5 326940..327149 208 N° 6 326776..326871 94  
complement(join(326776..326871,326940..327149,327345..327446,327537..327615,3277 46..328007,328093..328258))


exon

Literature and cross-references BnaCcP01
Literature Keeling,P.J. PEPdbPub (http://amoebidia.bcm.umontreal.ca/public/pepdb/agrm.php). Bigelowiella natans
DNA ref. JGI genome:   scaffold_38 (328258..326776)
EST ref. GenBank:   DR039603.1 [3' end]
Cluster/Prediction ref. JGI gene:   54605
Protein sequence: BnaCcP01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   304 (282)
PWM (Da):   %s   32952.47 (30607.2) Transmb domain:   %s   i5-22o
PI (pH):   %s   6.13 (6.29) Peptide Signal:   %s   cut: 23 range:23-304
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSALLSSIALVLVLCTAWTSAAQSDYTALSEDIRELIREKTCGPILVRLSWHDAGTFDSKSGTGGPRGAMRFSAGESTHGANNGLDIARSLLEPLKKKYSSVTYADLWSLAAIVAVEEM
GGPKISWRPGRTDATSAKDSVEEGRLPDAQLGCPHLRDVFHRMALTDQEIVALSGAHTIGAMHADRSGHEGPWTDQPQHFDNQYFKDLVGKEWVKTDASELGGAKGNAVYVAKGSPIKSG
TPIMLPTDVAMLEDSKMRVWVDLYAADETRFFQDFSSAFTKLQELGVPAFHGISNPHSHVKTEL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (5 introns) and 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTCCGCACTTCTTTCCTCAATCGCCCTCGTCCTCGTCCTCTGCACAGCCTGGACAAGCGCAGCCCAATCCGACTACACGGCCCTTTCTGAAGATATCCGAGAACTCATACGCGAG
AAAACTTGCGGCCCGATTCTCGTTCGCCTCAGTTGGCACGATGCAGGTCAGCAAGATTCATACCTGCCTAAACTTCGAGTGGAATTTCAGAACCTTGTATTCTAGCATCATTGCATCGGA
TTTCATTGCAGGCGCACCTTCGATTCTAAAAGCGGTACCGGAGGTCCTCGGGGTGCGATGAGGTTTTCTGCAGGCGAATCTACGCATGGTGCTAACAACGGACTCGACATCGCACGTTCC
TTGTTGGAGCCCTTAAAAAAGAAGTACTCGAGTGTTACTTACGCAGACCTCTGGAGCCTCGCTGCGATTGTTGCTGTAGAGGAAATGGGGGGACCAAAAATCTCATGGAGACCAGGGCGA
ACCGATGCGACTTCTGCTAAGGATAGTGTTGAGGAGTACGAAAAATCACGCTAGTTATCGCACCACCCCCCTACACAAATTTAAGGAAAACATGGATTTTCACGATACAAGCATACTCAT
TGATCGATTTGGAACGTTAACCAACTTTGAATTTGCGTTGTAAAGGGGGGTCGATTGCCGGATGCCCAGCTTGGATGTCCGCATCTCCGAGACGTCTTCCATCGCATGGCACTTACGGAT
CAAGAAGTAAGAAGACTGCGTAATGATATGAAGACGAAGAGATATGCGATCACTGTGAGTGATAAAAATTCTCATATCTATCGACATCTTGAACAGATATTGTCGCACTGAGCGGAGCGC
ACACTATCGGAGCTATGCATGCTGATAGGAGCGGACACGAGGGACCATGGACCGATCAACCGCAACACTTTGACAACCAGGTCGTTATTATCTATCCTCCCTCACAAGTAAATCGAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTGGAGGAGGAGGAATACAGCGTATGCTCAAGGATGTATTAGGAATTGCCAGAGCTTGTTCGAGTAA
TAATTAACATGTCATTCGCTACCTGCGTATATTAGTATATTTTAAGGATCTGGTCGGAAAGGAGTGGGTGAAGACGGATGCATCTGAACTTGGAGGGGCCAAGGGAAATGCAGTGTATGT
AGCAAAAGGTTCTCCAATCAAATCGGGAACGCCTATTATGCTACCAACCGATGTGGCCATGCTCGAAGATTCCAAGATGCGCGTATGGGTGGATTTATATGCTGCAGATGAAACGCGATT
TTTCCAGGTATTTCCCGATAATAAATACAAGAAGATTGTGACCTCTAGGTTGATGACGAGCTGTCATTTTTTTAGGAGATTTTTCATCGGCATTTACCAAGCTGCAAGAACTGGGAGTCC
CTGCATTCCATGGAATCTCGAACCCACATTCTCATGTGAAAACAGAGCTTTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTCCGCACTTCTTTCCTCAATCGCCCTCGTCCTCGTCCTCTGCACAGCCTGGACAAGCGCAGCCCAATCCGACTACACGGCCCTTTCTGAAGATATCCGAGAACTCATACGCGAG
AAAACTTGCGGCCCGATTCTCGTTCGCCTCAGTTGGCACGATGCAGGCACCTTCGATTCTAAAAGCGGTACCGGAGGTCCTCGGGGTGCGATGAGGTTTTCTGCAGGCGAATCTACGCAT
GGTGCTAACAACGGACTCGACATCGCACGTTCCTTGTTGGAGCCCTTAAAAAAGAAGTACTCGAGTGTTACTTACGCAGACCTCTGGAGCCTCGCTGCGATTGTTGCTGTAGAGGAAATG
GGGGGACCAAAAATCTCATGGAGACCAGGGCGAACCGATGCGACTTCTGCTAAGGATAGTGTTGAGGAGGGTCGATTGCCGGATGCCCAGCTTGGATGTCCGCATCTCCGAGACGTCTTC
CATCGCATGGCACTTACGGATCAAGAAATTGTCGCACTGAGCGGAGCGCACACTATCGGAGCTATGCATGCTGATAGGAGCGGACACGAGGGACCATGGACCGATCAACCGCAACACTTT
GACAACCAGTATTTTAAGGATCTGGTCGGAAAGGAGTGGGTGAAGACGGATGCATCTGAACTTGGAGGGGCCAAGGGAAATGCAGTGTATGTAGCAAAAGGTTCTCCAATCAAATCGGGA
ACGCCTATTATGCTACCAACCGATGTGGCCATGCTCGAAGATTCCAAGATGCGCGTATGGGTGGATTTATATGCTGCAGATGAAACGCGATTTTTCCAGGATTTTTCATCGGCATTTACC
AAGCTGCAAGAACTGGGAGTCCCTGCATTCCATGGAATCTCGAACCCACATTCTCATGTGAAAACAGAGCTTTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATTTCCGAAA ATACGATACA GCATCGCAAA ATGACTTCCG CACTTCTTTC CTCAATCGCC CTCGTCCTCG TCCTCTGCAC AGCCTGGACA AGCGCAGCCC AATCCGACTA CACGGCCCTT  TCTGAAGATA TCCGAGAACT CATACGCGAG AAAACTTGCG GCCCGATTCT CGTTCGCCTC AGTTGGCACG ATGCAGGCAC CTTCGATTCT AAAAGCGGTA CCGGAGGTCC TCGGGGTGCG  ATGAGGTTTT CTGCAGGCGA ATCTACGCAT GGTGCTAACA ACGGACTCGA CATCGCACGT TCCTTGTTGG AGCCCTTAAA AAAGAAGTAC TCGAGTGTTA CTTACGCAGA CCTCTGGAGC  CTCGCTGCGA TTGTTGCTGT AGAGGAAATG GGGGGACCAA AAATCTCATG GAGACCAGGG CGAACCGATG CGACTTCTGC TAAGGATAGT GTTGAGGAGG GTCGATTGCC GGATGCCCAG  CTTGGATGTC CGCATCTCCG AGACGTCTTC CATCGCATGG CACTTACGGA TCAAGAAATT GTCGCACTGA GCGGAGCGCA CACTATCGGA GCTATGCATG CTGATAGGAG CGGACACGAG  GGACCATGGA CCGATCAACC GCAACACTTT GACAACCAGT ATTTTAAGGA TCTGGTCGGA AAGGAGTGGG TGAAGACGGA TGCATCTGAA CTTGGAGGGG CCAAGGGAAA TGCAGTGTAT  GTAGCAAAAG GTTCTCCAAT CAAATCGGGA ACGCCTATTA TGCTACCAAC CGATGTGGCC ATGCTCGAAG ATTCCAAGAT GCGCGTATGG GTGGATTTAT ATGCTGCAGA TGAAACGCGA  TTTTTCCAGG ATTTTTCATC GGCATTTACC AAGCTGCAAG AACTGGGAGT CCCTGCATTC CATGGAATCT CGAACCCACA TTCTCATGTG AAAACAGAGC TTTAGAACGA AATTTGGGGG  ATTTGGTGCC GCTATGTACG ATTCATCATT GAGTAGAATT CGCGTTAGAA CTTCTGCTAA TGCGTATGTA CTTCACAGTC TCTTCACGTC TAGACATCGA TTACATAGTG ACGCGTCCAA  TGTTCATTCT GCCACTCTTT CGTTGTTTCG AAGTAGAACG ACATGAAGTC TCTGTTGTAA TGCAAGCTAT TCTAGGCTTC GAATCAGTAC TTAACACTGG CATTACTCAC GGAAAACGCT 
TTTTCCGGCG TCTTG 

Retrieve as FASTA