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Entry information : TpsCcP02
Entry ID 2556
Creation 2005-11-16 (Nenad Bakalovic)
Last sequence changes 2005-11-16 (Nenad Bakalovic)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-04 (Christophe Dunand)
Peroxidase information: TpsCcP02
Name TpsCcP02
Class Cytochrome C peroxidase    [Orthogroup: CcP004]
Taxonomy Eukaryota Bacillariophyta Coscinodiscophyceae Thalassiosiraceae Thalassiosira
Organism Thalassiosira pseudonana    [TaxId: 35128 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TpsCcP02
start..stop		 S start..stop
OCgrCcP02 353 4.25e-123 76..340 1..259
PmiCcP01 342 2.7e-118 69..339 3..273
PlCcP04 332 1.06e-114 70..342 9..275
CcurCcP03 327 8.7e-113 76..339 1..259
Literature and cross-references TpsCcP02
Literature Madera, M. et al., The SUPERFAMILY database in 2004: additions and improvements, Nucl. Acids Res., 32, D235-D239.
DNA ref. JGI genome:   scaffold_6 (553994..595194)
EST ref. GenBank:   FC508779.1 [5' end]  FC521774.1 [3' end]
Cluster/Prediction ref. JGI gene:   151372
Protein sequence: TpsCcP02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345 (307)
PWM (Da):   %s   36994.76 (33253.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.16 (9.33) Peptide Signal:   %s   cut: 17 range:17-323
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKVQAILSSL LFTGARTFAP AFLSHTRTTL HAANVGDLPD SNRRRELLSA PFLALIATSA SSPVNAFGAK NKAADYKAVA SDIASIVKDD PDKGPTLVRL AWHSSGTYDK MSKDGGSGGG  TIRFREELAH GGNAGLGSTA VVWLEDVKKK YGDSLSYADL YTLGGVVAIK ELGGPTIKWS SGRVDALDPS AVTPDGRLPN ADSGPAGSDP SDAAHLRTIF NRMGFNDQEI VALSGAHALG 
RCRPSASGYD GPWTPLPTTF NNLYFSLLNQ IKWAKRDWSG PFQYEDDGKK LMMLPTDLVL IQDAEFKKYV DLYAGDQNKF FSDFSKAFNK LEELGTTGLV ATQWS 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 4 ESTs.