Entry information : NtGPx06-1A (NtGPx06a)
Entry ID 2869
Creation 2006-03-15 (Marcia Pinheiro Margis)
Last sequence changes 2011-04-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-15 (Christophe Dunand)
Peroxidase information: NtGPx06-1A (NtGPx06a)
Name (synonym) NtGPx06-1A (NtGPx06a)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation Cytosolic
Tissue type Cell culture
Inducers Elicitor treatment (glucan, oligosaccharides, yeast extract, Phytophthora crude extract)
Hormon treatment
Repressor N/D
Best BLASTp hits
Perox score E-value NtGPx06-1A
start..stop
S start..stop
NtGPx06-1B 457 1.37e-166 1..232 1..232
NsGPx06 347 4.22e-124 64..232 1..169
GhGPx06-1 343 2.61e-122 64..232 1..170
StGPx06 336 1.7e-119 64..232 1..169
Literature and cross-references NtGPx06-1A (NtGPx06a)
Literature Takemoto D., Kawakita K. Molecular cloning of elicitor inducible genes of tobacco. Submitted (APR-2000) to the EMBL/GenBank/DDBJ databases.
Protein ref. UniProtKB:   Q9FXS3
mRNA ref. GenBank:   AB041518
Protein sequence: NtGPx06-1A (NtGPx06a)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   232 (442)
PWM (Da):   %s   25883.26 (47299.7)  
PI (pH):   %s   9.24 (4.13) Peptide Signal:   %s   cut: 23 range:23-464
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLYSATRVLI PRKNLSFLRQ FSLILKPTHF NSVSTPPIPT VISNSIVSAK RFELFCLRSD YSTMASQSSK PQSIYDFTVK DAKGNDVDLS IYKGKVLIIV NVASQCGLTN SNYTDMTEIY 
KKYKDQGLEI LAFPCNQFGG QEPGSIEEIQ NMVCTRFKAE YPIFDKVDVN GDNAAPLYKF LKSSKGGFFG DSIKWNFSKF LVDKEGNVVD RYSPTTTPAS MEKDIKKLLG VA 

Retrieve as FASTA  
Remarks Complete sequence from 11 + 3 ESTs.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAAGTTTAAG ATATTTGACC TTAGAAAGCA TCTTCTGAAA AATCTATAAA TTCATATACG CTAATGCTTT ATTCTGCAAC TCGTGTTCTC ATACCAAGAA AAAATCTCAG TTTCCTTAGG  CAATTTTCTT TGATTCTAAA ACCAACCCAT TTCAATTCTG TGTCTACTCC TCCGATTCCA ACAGTTATTT CCAATTCTAT TGTCTCCGCT AAGAGATTTG AGTTGTTTTG TTTAAGATCA  GATTATAGTA CCATGGCCAG CCAATCTAGC AAGCCTCAAT CTATTTATGA CTTCACTGTC AAGGATGCTA AGGGTAATGA TGTTGATCTC AGCATTTACA AGGGAAAGGT CCTTATCATT  GTCAATGTTG CATCACAGTG TGGCCTGACT AATTCAAACT ACACTGACAT GACCGAGATA TACAAGAAGT ACAAGGATCA AGGTCTGGAG ATTCTTGCAT TCCCTTGCAA CCAGTTCGGT  GGACAGGAGC CTGGAAGCAT TGAAGAGATC CAGAACATGG TTTGCACTCG CTTCAAGGCC GAGTACCCCA TATTTGATAA GGTTGATGTG AATGGTGATA ATGCTGCTCC ACTGTATAAG  TTCTTGAAAT CAAGCAAAGG TGGGTTCTTT GGGGATAGTA TCAAGTGGAA CTTCTCCAAA TTCCTTGTTG ACAAAGAAGG AAACGTCGTC GATCGCTACT CTCCAACCAC TACTCCAGCT  AGCATGGAGA AGGATATCAA GAAACTTTTG GGGGTTGCTT AAGCTCTGGA TTTGTCTGCA TCTGCATTCC TCTACTAGAA ATAATGACAG ACTACTATAG TGAATAAGTT GTATGTTGAT 
GTAATTTGCT TCCTGTTTTG CCACTACTTT GGTCAGCTGC TTGTACAATT TCAATATTCA ATACATTTCC AGTGACAAGT AAAAAAAAAA AAAAAAAAAA AAAAAAAAAC ATGT 

Retrieve as FASTA