1. Browse the Database
  2. View Redoxidase
Entry information : ThPrx72
Entry ID 2906
Creation 2006-03-22 (Christophe Dunand)
Last sequence changes 2015-11-12 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-11-12 (Achraf Jemmat)
Peroxidase information: ThPrx72
Name ThPrx72
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Thellungiella
Organism Thellungiella halophila (Eutrema halophilum)    [TaxId: 98038 ]
Cellular localisation N/D
Tissue type Leaves
Inducer Drought
Repressor N/D
Best BLASTp hits
Perox score E-value ThPrx72
start..stop		 S start..stop
TsPrx72 697 0 1..336 1..336
NoffPrx72-1B 667 0 1..336 1..336
NoffPrx72-1A 665 0 1..336 1..336
CrubPrx118 665 0 1..336 1..336
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '2906' 'join(2227..2460,2559..2750,2847..3012,3471..3889)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2227..2460 232 N° 2 2559..2750 190 N° 3 2847..3012 164 N° 4 3471..3889 417
join(2227..2460,2559..2750,2847..3012,3471..3889)


exon

Literature and cross-references ThPrx72
Literature Wong,C.E., Li,Y., Whitty,B.R., Diaz-Camino,C., Akhter,S.R., Brandle ,J.E., Golding,G.B., Weretilnyk,E.A., Moffatt,B.A. and Griffith,M. Expressed sequence tags from the Yukon ecotype of Thellungiella reveal that gene expression in response to cold, drought and salinity shows little overlap. Plant Mol. Biol. 58 (4), 561-574 (2005)
DNA ref. GenBank:   DQ226510.1 (2227..3889)
Protein sequence: ThPrx72
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336 (313)
PWM (Da):   %s   37215.94 (34801.6) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.95 (9.03) Peptide Signal:   %s   cut: 24 range:24-336
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKSLNILIVALSLIAFSPLCLCSKAYGSGGYLFPQFYDHSCPKA
QEIVQSIVAKAFAHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRDSARGFELIEEIKQALEQACPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLNLVDLVSLSG
SHTIGNSRCTSFRQRLYNQSGNGKPDLTLNQYYAYVLRKQCPKSGGDQNLFSLDFVTPFKFDNHYFKNLIMYKGLLSSDEILFTKNRESKELVKLYAENQEAFFEQFAKSMVKMGNISPL
TGMRGEIRRICRRVNHAY

Retrieve as FASTA  
Remarks Complete sequence from DNA
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAGTCATTGAATATTCTCATCGTAGCTCTCTCCCTCATCGCCTTCTCTCCTCTTTGTTTGTGTTCCAAAGCCTACGGAAGTGGCGGCTACCTCTTCCCTCAGTTCTACGATCAC
TCGTGTCCTAAAGCTCAAGAGATTGTTCAGTCCATTGTCGCTAAAGCATTCGCACATGACCCTCGCATGCCTGCCTCCTTGCTCAGACTTCATTTCCACGATTGTTTTGTCAAGAGGTTT
TAAGCTTAGCTACATCATTGTTTACTTTAACAATATATACATGCAGGAAAAGTTGTAATTATATATAATTTTATTGTTGTGCTTGGTATTGTAGGGATGTGATGCTTCCATACTATTGGA
CAGCAGTGGAACCATAATCAGCGAGAAACGATCAAACCCTAACCGTGACTCAGCCCGTGGTTTCGAGCTCATCGAAGAAATCAAACAAGCCTTAGAACAAGCATGTCCTGAAACAGTTTC
TTGCGCTGATATCTTGGCTCTAGCCGCTAGAGACTCAACTGTCATTTTGTAAGTCATCACGATTCACTAAAAACACAAATTTACTTGATCGTTAATTATCATTACGAATTTATTAATTCG
ACAAATGGACATATATACATATAGACGGGTGGACCGAGCTGGGAAGTACCTCTAGGAAGAAGAGATGCAAGAGGAGCAAGCTTGAGTGGTTCCAACAATGACATTCCTGCTCCCAACAAC
ACTTTTCAAACCATCCTCACTAAGTTCAAGCGTCAAGGCCTCAATCTCGTCGATCTTGTCTCCCTCTCTGTGGTATATACCCTTGCTCTATCTATCTTAATTACGCAAGACACATTGAAA
GAGCTTACCTATAGTAATCAACCCATGTTCAAAAACTCATCTTGCTAAAAAAAAATATGTTCAAAAACTCGTAAGAAAAACCCCATATTTTATTTTTATTATTTCTGCCTTTTTATATTA
TAAAAAGTATTGTTACATTAACTTTTAAAAAACAACATCTACGAATATGTTAAGGGGGCGTAGAACCAGATTGATAAAAACCATAGTTTGGTGATTTCAGTTTGCTAGTACTATAGTACT
AATTCTTCCGATGAGACATGGATTAATATACGATCAGTCTACTACTTAGCAAATTCATTTTGAATTTTGAGTTAGAAATCACCAATAAAACTTATAACACATTAATTTGTGATTTTTAAA
AGAGGTTACAATAGTTGTATGTAAAAATATACAATGTATATGATTTGTAGGAAGTCACACGATTGGAAACTCGAGGTGCACAAGTTTCCGGCAGAGGTTATACAACCAGTCTGGCAACGG
CAAGCCAGATCTAACACTTAACCAATACTACGCCTACGTGTTGCGTAAGCAATGTCCTAAATCAGGCGGGGACCAAAACCTCTTCTCCCTCGACTTTGTGACGCCGTTCAAGTTCGACAA
CCACTACTTCAAGAACCTGATCATGTACAAAGGGCTACTGAGCTCCGATGAGATTCTGTTCACGAAGAACAGAGAGTCTAAGGAGCTCGTGAAGCTCTACGCTGAGAATCAAGAGGCGTT
CTTCGAGCAGTTCGCGAAATCGATGGTGAAGATGGGGAATATCTCTCCGTTGACTGGCATGAGGGGAGAGATCCGGCGAATCTGTCGTAGGGTTAACCATGCTTATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCAAGTCATTGAATATTCTCATCGTAGCTCTCTCCCTCATCGCCTTCTCTCCTCTTTGTTTGTGTTCCAAAGCCTACGGAAGTGGCGGCTACCTCTTCCCTCAGTTCTACGATCAC
TCGTGTCCTAAAGCTCAAGAGATTGTTCAGTCCATTGTCGCTAAAGCATTCGCACATGACCCTCGCATGCCTGCCTCCTTGCTCAGACTTCATTTCCACGATTGTTTTGTCAAGGGATGT
GATGCTTCCATACTATTGGACAGCAGTGGAACCATAATCAGCGAGAAACGATCAAACCCTAACCGTGACTCAGCCCGTGGTTTCGAGCTCATCGAAGAAATCAAACAAGCCTTAGAACAA
GCATGTCCTGAAACAGTTTCTTGCGCTGATATCTTGGCTCTAGCCGCTAGAGACTCAACTGTCATTACGGGTGGACCGAGCTGGGAAGTACCTCTAGGAAGAAGAGATGCAAGAGGAGCA
AGCTTGAGTGGTTCCAACAATGACATTCCTGCTCCCAACAACACTTTTCAAACCATCCTCACTAAGTTCAAGCGTCAAGGCCTCAATCTCGTCGATCTTGTCTCCCTCTCTGGAAGTCAC
ACGATTGGAAACTCGAGGTGCACAAGTTTCCGGCAGAGGTTATACAACCAGTCTGGCAACGGCAAGCCAGATCTAACACTTAACCAATACTACGCCTACGTGTTGCGTAAGCAATGTCCT
AAATCAGGCGGGGACCAAAACCTCTTCTCCCTCGACTTTGTGACGCCGTTCAAGTTCGACAACCACTACTTCAAGAACCTGATCATGTACAAAGGGCTACTGAGCTCCGATGAGATTCTG
TTCACGAAGAACAGAGAGTCTAAGGAGCTCGTGAAGCTCTACGCTGAGAATCAAGAGGCGTTCTTCGAGCAGTTCGCGAAATCGATGGTGAAGATGGGGAATATCTCTCCGTTGACTGGC
ATGAGGGGAGAGATCCGGCGAATCTGTCGTAGGGTTAACCATGCTTATTAA

Retrieve as FASTA