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Entry information : BoPrx39_other
Entry ID 3002
Creation 2006-05-04 (Christophe Dunand)
Last sequence changes 2006-05-04 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2006-05-04 (Filippo Passardi)
Peroxidase information: BoPrx39_other
Name BoPrx39_other
Class Class III peroxidase     [Orthogroup: Prx003]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx39_other
start..stop		 S start..stop
BrPrx39-1A_other 417 9.59e-150 1..204 1..204
TsPrx39 392 1.64e-139 1..204 1..204
AtPrx39 380 4.81e-135 1..204 1..204
BstrPrx83 379 1.33e-134 1..204 1..204
Literature and cross-references BoPrx39_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B. , Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=18778596&dopt=GenBank
DNA ref. GenBank:   75972281
Protein sequence: BoPrx39_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   211 (188)
PWM (Da):   %s   22583.8 (20120.4) Transmb domain:   %s   o4-21i
PI (pH):   %s   8.14 (8.14) Peptide Signal:   %s   cut: 24 range:24-211
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARFGLVFVT ILVILGLVSF SEAQLKLGFY DKTCPNAEKI VQAVVNQHIR NVPSLAAGLI RMHFHDCFVR GCDGSILINA TSSNQQVEKV APPNLTVRGF DFIDLVKTVL ERKCPGVVSC 
ADIITLATRD SVAAIGGPTW NVPTGRRDGR ISNATEALNN IPPPFGNFTT LITLFGNQGL DVKDLVLLSG AHTIGVSHCS SFSNVSSLYR R 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST and 2 GSS (BH508958, BH701182), 3 introns. 3' end is missing. var. alboglabra