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Entry information : BoPrx50_other
Entry ID 3006
Creation 2006-05-04 (Christophe Dunand)
Last sequence changes 2006-05-04 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2007-12-24 (Christophe Dunand)
Peroxidase information: BoPrx50_other
Name BoPrx50_other
Class Class III peroxidase    [Orthogroup: Prx009]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type Etiolated seedlings
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx50_other
start..stop		 S start..stop
BnPrx50-1_other 665 0 1..326 1..326
BrPrx50-1Aa_other 661 0 1..326 1..326
TsPrx51 598 0 20..326 22..328
ThPrx51 598 0 20..326 22..328
Literature and cross-references BoPrx50_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BZ434643 [5' end]  BH985102 [3' end]  BZ434634 [3' end]
EST ref. GenBank:   AM056980
Protein sequence: BoPrx50_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (304)
PWM (Da):   %s   35672.23 (33299.8)  
PI (pH):   %s   9.25 (9.07) Peptide Signal:   %s   cut: 23 range:23-326
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAAKNLLLLF ISLFLTVNLV SAQLRRNFYA GSCPNVEQIV RDAVQKKVQQ TFTTIPATLR LYFHDCFVNG CDASVMIAST GNNKAEKDHP DNLSLAGDGF DTVTKAKQAL DAVANCRNKV  SCADILTIAT RDVVNLAGGP RYEVELGRLD GLSSTAASVE GKLPQPTDDV NKLTSLFAKN GLNLNEMIAL SGAHTLGFAH CTKVFNRIYT FNKTTQVDPT VNKGYVTELR ASCPRNIDPR 
VAINMDPTTP RQFDNVYYKN LQQGKGLFTS DQDLFTDRRS KPTVDLWANN ANLFNQAFVN SMIKLGRVGV KTGRNGNIRR DCGAFN 

Retrieve as FASTA  
Remarks Complete sequence from 1 EST and 3 GSS (BZ434643: exon 1 and 2, BZ434634: exons 3 and 4 and BH985102: exon 4). Var="alboglabra".