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Entry information : BoPrx22-1Cb_other
Entry ID 3008
Creation 2009-08-10 (Christophe Dunand)
Last sequence changes 2009-08-10 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2012-05-10 (Christophe Dunand)
Peroxidase information: BoPrx22-1Cb_other
Name BoPrx22-1Cb_other
Class Class III peroxidase     [Orthogroup: Prx040]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx22-1Cb_other
start..stop		 S start..stop
BrPrx22-1Ab_other 675 0 1..350 1..350
BrPrx22-1Aa_other 588 0 1..350 1..350
AhalPrx38 568 0 1..350 1..349
AtPrx22 566 0 1..350 1..349
Literature and cross-references BoPrx22-1Cb_other
Literature Barker,G.C., Sharp,A., Durkin,J., Naylor,R., Edwards,R., Gjetvaj,B., Lydiate,D. and King,G. Analyis of EST libraries of Brassica oleracea prepared from differing stages of development, Unpublished (2005)
DNA ref. GenBank:   BH935956.1 [5' end]  FI709645.1 [3' end]
Cluster/Prediction ref. UniGene:   Bol.907
Protein sequence: BoPrx22-1Cb_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   350 (321)
PWM (Da):   %s   36317.19 (33379.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   5.7 (5.09) Peptide Signal:   %s   cut: 30 range:30-350
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKFSPSFSCS AIGALILGCL LLRASISNGQ LRPDFYFGTC PHVFDIIGNV IVDELASDPR IAASILRLHF HDCFVNGCDA SILLDNSTSF RTEKDAAPNA NSARGFNVID RMKAKLETTC  PKTVSCADVL TIASQISVLL SGGPWWPLPL GRRDSLQAFF DLANTALPSP FFTLAELKAS FVAVGLNLSS xLVALSGGHT FGxxQCQFVT PRLYNFNGTN Sxxxxxxxxx xxQLRGLCPQ 
NGNGTVLVNF DPVTPDGFDN KYYTNLRNGR GLIQSDQELF STPQADTIPL VEQYRSNQTA FFDAFAKAMI RMGDLKPLTG NQGEIRLNCS VVNSRIMSVE NEDDGVVSSI 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs and 2 GSS (exons 1, 2 and 4). No overlap between 5' and 3'ends. var. alboglabra