Entry information : PtPrx27 (POPTR_0007s02580 / Potri.007G122100)
| Entry ID | 3105 |
|---|---|
| Creation | 2006-05-31 (Claudia Cosio) |
| Last sequence changes | 2006-05-31 (Claudia Cosio) |
| Sequence status | complete |
| Reviewer | Qiang Li |
| Last annotation changes | 2012-03-08 (Qiang Li) |
Peroxidase information: PtPrx27 (POPTR_0007s02580 / Potri.007G122100)
| Name (synonym) | PtPrx27 (POPTR_0007s02580 / Potri.007G122100) | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Class | Class III peroxidase [Orthogroup: Prx007] | ||||||||||||||||||||||||||||||||||||
| Taxonomy | Eukaryota Viridiplantae Streptophyta Salicaceae Populus | ||||||||||||||||||||||||||||||||||||
| Organism | Populus trichocarpa (Western balsam poplar) [TaxId: 3694 ] | ||||||||||||||||||||||||||||||||||||
| Cellular localisation | N/D |
||||||||||||||||||||||||||||||||||||
| Tissue types | Leaves Stems |
||||||||||||||||||||||||||||||||||||
| Inducers | Insect damage (Spodoptera exigua, Meloidogyne, Aphib) Pathogen interaction |
||||||||||||||||||||||||||||||||||||
| Repressor | N/D |
||||||||||||||||||||||||||||||||||||
| Best BLASTp hits |
|
||||||||||||||||||||||||||||||||||||
| Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '3105' 'complement(join(14042461..14042876,14042973..14043135,14043232..14043426,14043521..14043730))' |
Exons►
|
||||||||||||||||||||||||||||||||||||
Literature and cross-references PtPrx27 (POPTR_0007s02580 / Potri.007G122100)
| Literature | Ralph,S., et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences Mol. Ecol. 15 (5), 1275-1297 (2006). |
|---|---|
| DNA ref. | Phytozome 12: Chr07 (14043730..14042461) |
| EST ref. | GenBank: CV240369.1 |
| Omic ref. | ePlant: Potri.007G122100 |
Protein sequence: PtPrx27 (POPTR_0007s02580 / Potri.007G122100)
| Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
| Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
| Remarks | Complete sequence from genomic (chromo 7, 3 introns) and 1 EST. | ||||||||||||
| DNA ► Send to BLAST |
|
||||||||||||
| CDS► Send to BLAST |
|
||||||||||||
