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Entry information : LsPrx12-1
Entry ID 3531
Creation 2006-09-01 (Christophe Dunand)
Last sequence changes 2006-09-01 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsPrx12-1
Name LsPrx12-1
Class Class III peroxidase     [Orthogroup: Prx005]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca saligna    [TaxId: 75948 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsPrx12-1
start..stop		 S start..stop
LsaPrx12 555 0 1..277 1..277
LsPrx12-3 487 6.7e-177 1..276 1..275
LsePrx13 488 9.15e-177 1..277 1..276
LsPrx12-2 483 3.77e-175 1..272 1..272
Literature and cross-references LsPrx12-1
Literature Kozik,A et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW046262 [5' end]
Protein sequence: LsPrx12-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   276 (250)
PWM (Da):   %s   29570 (26695.5) Transmb domain:   %s   i12-34o
PI (pH):   %s   6.74 (6.50) Peptide Signal:   %s   cut: 27 range:27-276
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MECFTHNKTP LFFLVLLATL TNVALGQGTR VGFYRTSCPR VEAIVQSAVD AANRANPGVP PGLVRMFFHD CFVNGCDASI LITGPGSERT APPNSLLRGF EIIDAAKTEL ERVCPGVVSC  ADILAIAARD SVLLAGGIAR WPVPLGRRDG LVSRAADTAN LPAFNDAVNV QIRKFSEKGL NTQDLVTLSG AHTIGTAACA LFSYRLYNFN NTNGPDPSID QTFLPTLRNL CPNGGDGTRR 
VALDTGSENR FDNSYFSNLR DRRGVLESDQ LL*SDPT 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. Frame shift before FHDC and after FDN, 3'end is missing. Strain="PI-491204".