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Entry information : MsAPx01
Entry ID 3937
Creation 2006-09-22 (Filippo Passardi)
Last sequence changes 2006-09-22 (Filippo Passardi)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2008-12-31 (Christophe Dunand)
Peroxidase information: MsAPx01
Name MsAPx01
Class Ascorbate peroxidase     [Orthogroup: APx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago sativa (alfalfa)    [TaxId: 3879 ]
Cellular localisation Cytosolic
Tissue types Callus
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MsAPx01
start..stop		 S start..stop
MtAPx01 459 7.5e-167 1..226 1..226
PsAPx01 446 8.41e-162 1..226 1..226
VuAPx01 443 1.09e-160 1..226 1..226
GmAPx26 438 8.41e-159 1..226 1..226
Literature and cross-references MsAPx01
Literature [1] Zhang,C., Huang,X., Wu,J., Feng,B., Lu,X., Huang,X., Chen,Y. and Li,X. Molecular analysis of the effect of thidiazuron on morphogenesis of Medicago sativa callus.
[2] Winicov,I. and Xue,L. Ascorbate peroxidase cDNA from alfalfa.
Protein ref. UniProtKB:   Q45NL3 [5' end]  Q940F3 [3' end]
mRNA ref. GenBank:   AY054988  DQ122791 [5' end]
Protein sequence: MsAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   227
PWM (Da):   %s   24492.69  
PI (pH):   %s   7.23
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGKSYPTVSA DYQKAVEKAK RKLRGFIAEK KCAPLMLRLA WHSAGTFDSK TKTGGPFGTI KHQAELAHGA NNGLDIAVRL LEPLKEQFPI ISYADFYQLA GVVAVEITGG PEVPFHPGRE 
DKPEPPPEGR LPDATKGSDH LRDVFGKAMG LSDQDIVALS GGHTIGAAHK ERSGFEGPWT SNPLIFDNSY FKELLGGEKE GLLQLPSDKA LLSDPVFRPL VEKYAAG 

Retrieve as FASTA  
Remarks Partial sequence from two ESts. 3'end is missing. Note that accession DQ122791 sequence was of bad quality (STOP codon, several gaps when aligned to other APX) at the 3'end => discarded.