View Redoxidase 4018

Entry information : OsPrxII0501(OsPrxIIE01 / LOC_Os06g42000)

Entry ID	4018
Creation	2006-10-30 (Nicolas Rouhier)
Last sequence changes	2006-10-30 (Nicolas Rouhier)
Sequence status	complete
Reviewer	Catherine
Last annotation changes	2022-01-25 (Catherine )

Peroxidase information: OsPrxII0501(OsPrxIIE01 / LOC_Os06g42000)

Name

OsPrxII0501(OsPrxIIE01 / LOC_Os06g42000)

Class

Atypical 2-Cysteine peroxiredoxin (type II) [Orthogroup: PrxII001]

Taxonomy

Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons

Organism

Oryza sativa ssp japonica cv Nipponbare [TaxId: 39947 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	OsPrxII0501 start..stop	S start..stop
SbPrxII01	332	6e-117	4..232	2..233
ZmPrxII0501	313	2.54e-109	70..232	69..233
ScPrxII05	306	4.8e-107	16..232	1..211
OsPrxII0502	295	2.64e-102	69..232	61..225

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4018' 'join(24830496..24831194)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	24830496..24831194	697
join(24830496..24831194)

Literature and cross-references OsPrxII0501(OsPrxIIE01 / LOC_Os06g42000)

Literature	Dietz et al The function of peroxiredoxins in plant organelle redox metabolism. J Exp Bot. 2006;57(8):1697-709.
Protein ref.	UniProtKB: Q69TY4
DNA ref.	GenBank: NC_008399.1 (24830496..24831191)
Cluster/Prediction ref.	UniGene: Os.9313

Protein sequence: OsPrxII0501(OsPrxIIE01 / LOC_Os06g42000)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	232
PWM (Da):	23560.49	Transmb domain:	i42-64o84-106i
PI (pH):	9.21

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MAAAASTLAS LSATAAAAAG KRLLLSSPSR SLSLSLASRG RIAVMPHLRA GILSAAPRRA VSASAPAAAT IAVGDKLPDA TLSYFDSPDG ELKTVTVRDL TAGKKVVLFA VPGAFTPTCT
QKHVPGFVAK AGELRAKGVD AVACVSVNDA FVMRAWKESL GVGDEVLLLS DGNGELARAM GVELDLSDKP AGLGVRSRRY ALLAEDGVVK VLNLEEGGAF TTSSAEEMLK AL

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 6, no intron), 3 cDNA and 68 ESTs.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGGCCGCCG CCGCCTCCAC CCTCGCCTCC CTCTCCGCCA CCGCGGCCGC GGCCGCCGGC AAGCGCCTCC TCCTCTCCTC CCCCTCCCGC TCCCTCTCCC TCTCCCTCGC CTCCCGCGGC CGCATCGCCG TCATGCCCCA CCTCCGCGCT GGCATCCTCT CCGCCGCACC GAGGAGGGCG GTGTCGGCCT CGGCCCCGGC CGCGGCCACC ATCGCGGTCG GGGACAAGCT CCCCGACGCG ACGCTCTCCT ACTTCGACTC GCCCGACGGG GAGCTGAAGA CGGTGACCGT GCGCGACCTC ACCGCCGGGA AGAAGGTGGT CCTCTTCGCG GTCCCCGGCG CGTTCACCCC GACCTGCACG CAGAAGCACG TCCCGGGGTT CGTCGCCAAG GCCGGGGAGC TCCGCGCCAA GGGGGTCGAC GCCGTGGCCT GCGTCTCCGT CAACGACGCG TTCGTGATGC GGGCGTGGAA GGAGAGCCTC GGCGTCGGCG ACGAGGTGCT CCTCCTCTCC GACGGCAACG GCGAGCTCGC CCGCGCCATG GGCGTCGAGC TCGACCTCTC CGACAAGCCC GCCGGCCTCG GCGTGCGGTC CCGCCGCTAC
GCGCTCCTGG CGGAGGACGG CGTCGTCAAG GTGCTCAACC TCGAGGAGGG CGGCGCCTTC ACCACCAGCA GCGCCGAGGA GATGCTCAAG GCGCTCTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA