View Redoxidase 423

Entry information : GmPrx10 (Glyma06g45910.1 / PC7)

Entry ID	423
Creation	2005-06-21 (Christophe Dunand)
Last sequence changes	2011-10-10 (Christophe Dunand)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2011-12-13 (Qiang Li)

Peroxidase information: GmPrx10 (Glyma06g45910.1 / PC7)

Name (synonym)

GmPrx10 (Glyma06g45910.1 / PC7)

Class

Class III peroxidase [Orthogroup: Prx188]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue types

Hypocotyls
Roots

Inducers

Cyst nematode infection
Pathogen interaction
Phytophthora infection

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx10 start..stop	S start..stop
GmPrx45	632	0	1..324	1..324
PvPrx12	589	0	1..324	1..325
GmPrx162	565	0	1..324	1..325
MtPrx53	550	0	1..323	3..326

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '423' 'complement(join(48635024..48635433,48636059..48636221,48637105..48637296,48637410..48637619))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	48637410..48637619	208	N° 2	48637105..48637296	190	N° 3	48636059..48636221	161	N° 4	48635024..48635433	408
complement(join(48635024..48635433,48636059..48636221,48637105..48637296,4863741 0..48637619))

Literature and cross-references GmPrx10 (Glyma06g45910.1 / PC7)

Literature	Chen,W. and Atherly,A.G, unpublished.
Protein ref.	UniProtKB: Q9ZTW8 [Incorrect prediction]
DNA ref.	Phytozome 12: Gm06 (48637619..48635024)
Cluster/Prediction ref.	UniGene: Gma.320

Protein sequence: GmPrx10 (Glyma06g45910.1 / PC7)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	324 (301)
PWM (Da):	35129.04 (32719.8)
PI (pH):	8.16 (8.02)	Peptide Signal:	cut: 24 range:24-324

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MGSQSYFKALIICLIALIGSTQAQLQLGFYAKSCPKAEQIILKYV
VEHIHNAPSLAAALIRLHFHDCFVNGCDGSVLVDSTPGNQAEKDAIPNLTLRGFGFIEAIKRLVEAECPGVVSCADILALTARDSIHATGGPYWNVPTGRRDGFISRAADPLRSLPAPFHNLTTQLTLFGNVGLDANDLVLLVGA
HTIGIAHCSSISTRLYNFTGKGDTDPTIDNGYAKNLKTFKCKNINDNSLIEMDPGSRDTFDLGYYKQVVKRRGLFQSDAELLTSPITRSIIASQLQSTQGFFAEFAKSMEKMGRINVKLG
SEGEIRKHCARVNN

Retrieve as FASTA

Remarks

Complete sequence from genomic and 35 ESTs.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGGTAGCCAGAGTTACTTCAAGGCTTTGATTATTTGCCTTATAGCACTAATTGGATCAACTCAAGCTCAATTGCAGCTTGGTTTCTATGCCAAAAGTTGTCCAAAGGCTGAGCAAATA
ATTCTGAAGTACGTTGTTGAGCATATCCACAACGCTCCATCACTAGCAGCTGCTCTCATAAGATTGCACTTCCATGATTGTTTTGTCAATGTATGCACATATTTATGGTTTCATTTTCTA
GTTAATTGATGACTATTTTGTTAAACTGATGAGGAGGTAACATTAATTAACGTGTAGTGTATATATATTAATATTAATTTCAGGGGGTTGTGATGGATCAGTGCTTGTGGACTCAACACC
AGGGAATCAAGCTGAAAAGGACGCTATTCCAAATCTTACACTCCGAGGCTTTGGCTTCATTGAAGCAATAAAGAGGCTTGTTGAAGCTGAATGCCCTGGTGTAGTCTCTTGTGCTGATAT
CTTGGCTTTGACTGCCAGAGACTCTATTCATGCCACTGTAAGTACTTACTTCATCTTTTAAACTCTCAATTAATTGAAAGAATTTTATAATTAAGAATATAATAAATAATAGTTAAATTT
AATCTTATTTGTATGGAAAATTCATATTGTGTTGTACTTCTGTTGAAAATTTTACTATATGTACTTCACAAATAGTTTGAATATCCCAAACTTTATATTTTTTTTGTTGTCCTTTTTCTA
CCAATCTTCATCACAAACCACTTACATGGCTCCGTCAAGCATTGTAGTATAAGTATTTTTGTGACGTAGAGTTGCAATATGACGACTCTTGATGGAGTTATATTAGCGTTTTGTAAAGAA
ATGACTAAGAATGAAAGGTTATTTCATCACATATATCATAAACGGAAAACTAATTACATAAGTAATTATATAAATTAAAAGCAAAAATCAAGATATTTACTAGGATGAAAAATATATTTA
AATTGAGATAAACTATAACACCTTTTAATATTTATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATTTATAATAACAATTT
TTTTTATTTTTAAAACATCATTTTTTTCCCTTTTAATTTGTTATATCAATATCATATGCTATATTAGTGGCCATATAATTTTAAAAATTTATTCTGTCCTTAAAATTGTCCATGTTGCAT
TAAATTCGTGTTTGTGTGTTACAAACTAGGGTTGGCCTGATGGTAGAAGTTAGAATAGATGCATGAAATTTAAGTTTGACTTTCATTATCATCATTCTAAAAAAAAAACTCATGTTTCTG
CTATGTTTTCTCTATGCTTTCTTATATAGAATAGAAATGAGTCAGATTCTTGTTTTGTGATGATTGAGATGGGTTTGCAGGGGGTGGACCCTATTGGAATGTTCCAACAGGACGAAGGGA
TGGGTTCATCTCTAGAGCAGCAGATCCGTTACGCAGCCTTCCTGCTCCTTTTCACAACCTCACTACCCAACTAACACTCTTTGGCAATGTTGGACTTGATGCAAATGACCTTGTCTTGCT
TGTTGGTATGTTAAACACAAGTTGCATGATAAAAGTTTGCATCAGGCTAGTTGAGAAAACATTTTCTATTTTTTTTCACTTTTAATTATAAAACTGACATTTATTTTTAAATTACTTTTT
GTTTTCTAAAACTTGTACTTCGTCCGTACTCAACTATAAGAAGAAAAAAAAAGTTAGGTGGACTGAAATGTAAATCAATTTCAACTCATTCAACCTTATTTAATTAATGTCATTATTTCA
AAATATCCAGGAATTAATTAAAATGTGATTAACATCTTCGATAAATATGATTAAGGATAATTTAAAAAATGCAATTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAAAAAA
TTAAATAAACTTAGTTAACAACCATAATTAGTGTGAAATTATATATTATTATTTATATTTGAGTTTGAAGGGAGTATAAGAACACATAAAACATAAAAGATTTTTCAAAGTAAATAAGTC
CTAAGTCAATTAAATAAAACTCTCATTGTGATTGAGAATAATACTAGAAACACCAAAAAATTATATACATATATATAAGTTTTTTTTTTCTTTTTTTGTTCTACATTTAAATTTCTCTAT
CTCTAATCGCCAAAAATTCAATTCCTTCAGGTGTGCTCACACAATTGGTATTGCCCATTGTTCATCAATTTCAACCCGTCTATACAATTTCACAGGCAAGGGTGACACAGACCCAACAAT
AGACAATGGATATGCAAAAAATCTCAAGACCTTCAAGTGTAAGAACATTAATGATAACTCACTTATTGAGATGGACCCTGGAAGTCGTGATACATTTGATCTTGGATATTACAAACAAGT
GGTTAAGAGAAGGGGTTTGTTCCAATCAGATGCTGAATTGCTTACTAGTCCTATCACAAGGTCTATTATCGCTAGTCAACTTCAGTCAACTCAAGGATTCTTTGCGGAATTTGCCAAGTC
TATGGAGAAAATGGGACGAATTAATGTCAAGCTTGGATCTGAAGGAGAGATAAGGAAACATTGTGCACGAGTTAATAACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA