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Entry information : PtaGPx06-1
Entry ID 4559
Creation 2007-02-08 (Christophe Dunand)
Last sequence changes 2007-02-08 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2009-01-24 (Christophe Dunand)
Peroxidase information: PtaGPx06-1
Name PtaGPx06-1
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue types Embryos
Roots
Stems
Inducers Cold stress
Mycorrhiza
Repressor N/D
Best BLASTp hits
Perox score E-value PtaGPx06-1
start..stop		 S start..stop
PpGPx06 341 1.3e-122 1..170 1..170
PpGPx06-2 299 6.97e-106 1..170 1..170
PabGPx99 296 7.53e-105 1..170 1..170
PabGPx55 293 9.38e-104 1..170 1..170
Literature and cross-references PtaGPx06-1
Literature Cairney,J., Zheng,L., Cowles,A., Hsiao,J., Zismann,V., Liu,J., Ouyang,S., Thibaud-Nissen,F., Hamilton,J., Childs,K., Pullman,G.S.,Zhang,Y., Oh,T. and Buell,C.R. Expressed Sequence Tags from loblolly pine embryos reveal similarities with angiosperm embryogenesis. Plant Mol. Biol. 62 (4-5), 485-501 (2006)
Cluster/Prediction ref. UniGene:   Pta.4122
Protein sequence: PtaGPx06-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   170 (309)
PWM (Da):   %s   18879.5 (34899.9) Transmb domain:   %s   i5-24o
PI (pH):   %s   4.75 (7.80) Peptide Signal:   %s   cut: 0 range:Ymax-308
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTESSSEQYS SIYDFTIKDI KGNDVDLSVY KGKILLIVNV ASQCGLTTSN YKEMSDLYAK YKDQGLEILA FPCNQFGEEE PGDNAEIAEK ICTRFKAEFP IFEKIEVNGS NAAPIYKFLK 
SSKGGTFGDS IKWNFTKFLV DKDGNVVERY APTTSPLSFE KDVKKLLGVA 

Retrieve as FASTA  
Remarks Complete sequence from 32 ESTs. Also compile from Pinus Gene Index: TC59008 (also contain pinus pinaster sequences). 98% homologous sequences were found in Laccaria bicolore libraries