View Redoxidase 4679

Entry information : NcPrxII-A

Entry ID	4679
Creation	2007-02-16 (Christophe Dunand)
Last sequence changes	2012-05-22 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-22 (Christophe Dunand)

Peroxidase information: NcPrxII-A

Name

NcPrxII-A

Class

Atypical 2-Cysteine peroxiredoxin (type II) [Orthogroup: PrxII001]

Taxonomy

Eukaryota Fungi Ascomycota Sordariomycetes Sordariaceae Neurospora

Organism

Neurospora crassa [TaxId: 5141 ]

Cellular localisation

N/D

Tissue types

Conidia
Mycelium

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	NcPrxII-A start..stop	S start..stop
NcPrxII-B	269	1.1e-94	1..138	1..166
CgPrxII	196	7.58e-66	1..138	1..166
VdaPrxII01	195	2.01e-65	3..138	2..166
CgPrxII_CBS14851	195	2.24e-65	1..138	1..166

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '4679' 'complement(join(4732008..4732184,4732253..4732455,4732653..4732689))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	4732653..4732689	35	N° 2	4732253..4732455	201	N° 3	4732008..4732184	175
complement(join(4732008..4732184,4732253..4732455,4732653..4732689))

Literature and cross-references NcPrxII-A

Literature	REFERENCE 1 Zhu,H., Lai,H., Kupfer,D., Dunlap,J.C. and Roe,B.A. Two Neurospora crassa EST Databases. REFERENCE 2 Galagan J.E. et al., The genome sequence of the filamentous fungus Neurospora crassa. Nature 422:859-868(2003).
Protein ref.	UniProtKB: Q7SDU1
DNA ref.	JGI genome: supercont10.1 (4732689..4732008)
Cluster/Prediction ref.	UniGene: Ncr.7177

Protein sequence: NcPrxII-A

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	138
PWM (Da):	14790.54	Transmb domain:	i7-26o
PI (pH):	6.52

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSALKAGDSFPEAFANKKVVLVAVPGAFTPTCQQQHVPSYLAKLEEFKSKGVDQIIFIASNDAWVMAAWGKANGVKDESLFMSDADCKFSKSIGWTQGDRTKRYAIVIDHGKVTYAELDE
VPKSIANTGADGVLAKL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo I, 3 exons), 1 mRNA (XM_959107), 11 ESTs. Strain="OR74A" and "74-OR23-1A / FGSC 987". Homology with plant PrxII but the second cysteine is in a different position.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTGCTCTTAAGGCCGGTGACTCTTTCCCCGAAGGTGTTACTTTCACCTACGTCGCGCCCAGCGGTGACACAGACCTTACCGTCTGCGGTCTTCCCATCCAGTATGATGCCAGCAAA
GGCAAGTAAATATATCATGGCTCACTCACAAGGAACCCTCACATCATCTTTGACTTGTATTTTTTCTCTCCACACCTATCTATATACTAACGCAATCTCTTACCCACGACGTAGCGCGTT
CGCGAACAAGAAGGTCGTCCTCGTCGCCGTCCCCGGTGCCTTCACCCCCACCTGCCAGCAGCAGCACGTCCCCTCGTATCTGGCCAAGCTCGAGGAGTTCAAGTCCAAGGGCGTCGACCA
AATCATCTTCATTGCCAGCAACGATGCGTGGGTGATGGCCGCTTGGGGCAAGGCCAACGGTGTTAAAGATGAGTCTATTGTAAGTAATAATTCATGTCCCTCCTGCCCCCCCTCACCACA
CCTAACTGACACGCAACGAATGTTTAGCTCTCTTTATGTCCGATGCCGACTGCAAGTTCAGCAAGAGCATCGGCTGGACCCAGGGTGACCGCACCAAGCGCTATGCTATTGTCATCGACC
ACGGCAAGGTTACCTACGCCGAGTTGGATGAGGTGCCTAAGAGCATCGCCAACACTGGTGCCGACGGTGTCCTGGCTAAGCTCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCTGCTCTTAAGGCCGGTGACTCTTTCCCCGAAGCGTTCGCGAACAAGAAGGTCGTCCTCGTCGCCGTCCCCGGTGCCTTCACCCCCACCTGCCAGCAGCAGCACGTCCCCTCGTAT
CTGGCCAAGCTCGAGGAGTTCAAGTCCAAGGGCGTCGACCAAATCATCTTCATTGCCAGCAACGATGCGTGGGTGATGGCCGCTTGGGGCAAGGCCAACGGTGTTAAAGATGAGTCTATT
CTCTTTATGTCCGATGCCGACTGCAAGTTCAGCAAGAGCATCGGCTGGACCCAGGGTGACCGCACCAAGCGCTATGCTATTGTCATCGACCACGGCAAGGTTACCTACGCCGAGTTGGAT
GAGGTGCCTAAGAGCATCGCCAACACTGGTGCCGACGGTGTCCTGGCTAAGCTCTAA

Retrieve as FASTA