View Redoxidase 5138

Entry information : MtPrxQ ( Medtr4g124790.1 [4.0] / Medtr4g124790.1 [3.5])

Entry ID	5138
Creation	2007-04-06 (Christophe Dunand)
Last sequence changes	2016-05-03 (Catherine Mathe)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2016-05-11 (Christophe Dunand)

Peroxidase information: MtPrxQ ( Medtr4g124790.1 [4.0] / Medtr4g124790.1 [3.5])

Name (synonym)

MtPrxQ ( Medtr4g124790.1 [4.0] / Medtr4g124790.1 [3.5])

Class

Atypical 2-Cysteine peroxiredoxin (type Q) [Orthogroup: PrxQ001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Medicago

Organism

Medicago truncatula (barrel medic) [TaxId: 3880 ]

Cellular localisation

N/D

Tissue types

Leaves
Roots
Seeds
Shoots
Stems

Inducers

Colletotrichum inoculation
Insect damage (Spodoptera exigua, Meloidogyne, Aphib)
Mycorrhiza
Pathogen interaction
Phoma infection
Phosphate starvation

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MtPrxQ start..stop	S start..stop
AdePrxQ	317	1.29e-111	1..208	1..210
SlinPrxQ	310	3.24e-109	32..212	8..185
PbPrxQ01	306	1.7e-107	4..212	2..214
PtPrxQ01	306	1.92e-107	4..212	2..213

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5138' 'join(51720136..51720327,51720419..51720556,51722423..51722512,51722583..51722801)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	51720136..51720327	190	N° 2	51720419..51720556	136	N° 3	51722423..51722512	88	N° 4	51722583..51722801	217
join(51720136..51720327,51720419..51720556,51722423..51722512,51722583..51722801 )

Literature and cross-references MtPrxQ ( Medtr4g124790.1 [4.0] / Medtr4g124790.1 [3.5])

Literature	Lin,S., Dixon,R., May,G., Sumner,L., Gonzales,B., Cook,D., Kim,D., Young,N., Cannon,S. and Roe,B.A. Medicago truncatula BAC Clone mth2-84a20.
DNA ref.	GenBank: AC186199 (28919..31584) Phytozome 12: chr4 (51720136..51722801)
Cluster/Prediction ref.	Phytozome Gene 12: 31107814 UniGene: Mtr.14713
Omic ref.	Gene atlas: Mtr.10844.1.S1_at Mtr.22013.1.S1_s_at Legoo: Mtr.10844.1.S1_at Mtr.22013.1.S1_s_at

Protein sequence: MtPrxQ ( Medtr4g124790.1 [4.0] / Medtr4g124790.1 [3.5])

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	212
PWM (Da):	23179.95
PI (pH):	10.13

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKASLTLPTNSFPTFIHPQNISTSLTSAPFNSQFFGLKLSHSSISKTTSSPPSSFKRGFIFAKVSKGSKPPAFTLKDQDGKTVSLSKYKGKPVVVYFYPADETPGCTKQACAFRDSYEK
FKKAGAEVVGISGDDSSSHKAFAKKYKLPFTLLSDEGNKVRKEWGVPGDFFGSLPGRETYVLDKNGVVQLVYNNQFQPEKHIDETLKLLQSL*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 4, 3 introns) and 17 ESTs. Cultivar="Jemalong" and "A17".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGGCTTCCCTCACTCTCCCAACCAATTCTTTCCCCACATTTATTCACCCTCAAAACATATCAACATCACTTACTTCAGCTCCATTCAATTCTCAATTTTTTGGCCTCAAGCTA
TCTCATTCTTCCATTTCCAAAACCACTTCTTCTCCACCTTCTTCATTCAAAAGAGGTTTCATTTTTGCCAAGAGGTACTTTATTCACAATATACAAGTTGCTACAATATATCAGCATTAC
TGTTTGTTTGTTTTCTATATGTTGAATTCATTGGCAAATGGGCAGGTGAGTAAAGGTTCAAAGCCACCGGCTTTCACTTTGAAAGACCAAGATGGCAAGACAGTGAGTCTCTCCAAGTAC
AAAGGGAAACCTGTGGTTGTTTATTTCTACCCTGCTGATGAGACCCCTGGCTGTACCAAACAGAGGTAAGAAGAAAGAAACACTCATTTACTCTCAATGCTGCATATTTTTGGAGTTTGG
ACTGATTCAATTTCCGGAGACCTCTGTTTGAACATCTAATCAAAATGAATGCTTCTTTAAATTTTGTAATTCATAAGTGGATATGCATTGTTAAGTGTCATTAGTAATTCTGATGCGACT
ATAGTGTGTAGTACTTCCCTTGTGTTAGTTCTGGCGGACCTTTTGGGGAGTTAATTAGTTAGGTCTCAGTCAAGGGTAATAGGGTAGTATATAAACTGATGTATCCTTGTAAAGAGATAA
AAGAGTGACATTTTCATAGAATCGTTCATCAAGAGAGAAAATTGTGTGCTCAAGTGAGCAGGTTGAGATTTTCCTTTCCTACAAAGTCTTGTACATATGTTGTGTTTAACTTGATCATAG
TGATAGAATCTAGAGCTGTAAAAATGGGCTAGCCCATTTGGACCACCCCACCAAGCCCTTTATTTTAGAATTCTGCTCTTCACCCAGCACAAAACACTTGCGCCATGCAGCCATGCTCAA
AATGTCCCTGCATTAGTTAACTAACGCAAGTGTAAAAAATACCTGACTTAATTTTTACACGCTGCATGAGTTAACTCAGGCAAAAATTAACAGATGCGTTAACTCACGCTAGTTTTCAAA
ACTTCTGATCATATCACTCACGCTGATTTGACTGGAGCTTTATCACATGAAATGAATTTCTAGATTCGGTAGTATCTAAAATGAGAAAATGCAAAGTGGGCCAATGCATGAAAAGCAAAG
ACCAATTTGACTGGATCTTTAAAGAATTAACCACCACACCATGCATACAGAAACCACATGCATTCACTATTACTTATTTTACATGATGATCCTCTTTCTCTCTCATTGACCCATACATAC
ATACATACATACATACATAATACTATTAATGTCACATGTGTAAAAACTAAGTCAAGCATTTTTTACACTTGCGTTAGTTAACTAACGCAAGAGCATTTTGAACATAGCTGCAGGGCGCGA
GCGAAAAGTGTAGGTGAAGAGCAAAATTCTTTATTTTATAGAGCTTGGGCCTGAAAATTTAAGCCCATAATTTTTAGCCCGCTCAAAATACCGACTATCCTGCATGGGCCAGGGTAGCCT
GTTTCCCGTATAACCAGAGTAAAGTCACAAACTGAAACAGAAATGTTGAAATTTGATTTTAACTATTAAAAGGCCACCTTTTTTATAGACATTAACTTTCAATACTCTAACAGCCATTGC
CCAGAATATTAGTCTTGCTATCTCAACCATGCAACAATAATTTGGGCACTTGATGTGCAGTTACTGTGTGTCGAATGCAGCCACAACATCTTAGCAGTAATGCATAAAATTAAGTCAGTG
CTATTGGGGAAATGAAAAAACATTGAATACATGTAGTGTTATTAGAGCTTGTTTTTAAGCAGGGTTTTTTAGCCCGGTTTGATAAAGCTTGAAGCCTGTGAAGGCCAGGTAGCCCGTTTT
AATAGCTCTGGTAGGGTCAACCTCAGTGAGGATGTAGAAGACCAATCTCTGAACTTCGATAAATCTTGTGTGTTAATTCTTTACCTTCTGCAATATTTCATTTCTCCACGCGTTTTAGAA
CTGCTTTATCTTTTCTGTTTCAATCCACATCAGAAGAGTTCTCAAATTTTATCCAATATTTATCTACTGATTATTAGCACCTTGTCCTCTAATTCCTAACAGTAATTGTTCATGAAGGAT
TATGATATAATTAATTCCAATATGGTAAAGGCATGGAATCAGATTATGCAGAGTAGAGCAAATACAATAAACTATTTCCATCGTTCTACTTGTATAGTTAAGGAAACAATTTCATGAATT
TATTATTGCAGGCCTGTGCTTTTAGGGATTCATATGAGAAGTTCAAGAAAGCAGGAGCAGAGGTTGTTGGGATAAGTGGAGACGATTCTTCCTCTCACAAGAGGTAAAACTCAGAATTTT
CACTGCATAATATTCGTGCCAATTAATTAACCAATGCATTGCATGAAATGTAGGCATTTGCCAAGAAGTACAAACTTCCATTTACCTTGTTGAGTGATGAGGGTAACAAGGTAAGGAAAG
AGTGGGGAGTGCCTGGCGATTTCTTTGGATCATTGCCTGGGAGAGAGACTTATGTTCTTGACAAAAATGGTGTGGTTCAGCTTGTATACAACAATCAGTTCCAACCTGAAAAGCATATTG
ATGAGACCTTGAAACTACTCCAAAGCCTTTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA