View Redoxidase 525

Entry information : GmPrx35(Glyma.07G260300 / Glyma07g39020.1/ Prx2b)

Entry ID	525
Creation	2006-10-30 (Christophe Dunand)
Last sequence changes	2011-07-04 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2019-02-27 (Christophe Dunand)

Peroxidase information: GmPrx35(Glyma.07G260300 / Glyma07g39020.1/ Prx2b)

Name

GmPrx35(Glyma.07G260300 / Glyma07g39020.1/ Prx2b)

Class

Class III peroxidase [Orthogroup: Prx012]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue types

Floral meristems
Hypocotyls
Leaves (fully expanded)
Roots
Seed coats
Somatic embryos

Inducers

Pathogen interaction
Phytophthora infection
Salicylic acid treatment
Salt stress

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx35 start..stop	S start..stop
GmPrx02	650	0	1..334	1..330
PvPrx11	647	0	1..334	1..334
VuPrx01	644	0	1..334	1..333
PcoPrx03	632	0	16..336	15..333

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '525' 'complement(join(43621674..43622095,43622539..43622704,43622943..43623131,43623261..43623494))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	43623261..43623494	232	N° 2	43622943..43623131	187	N° 3	43622539..43622704	164	N° 4	43621674..43622095	420
complement(join(43621674..43622095,43622539..43622704,43622943..43623131,4362326 1..43623494))

Literature and cross-references GmPrx35(Glyma.07G260300 / Glyma07g39020.1/ Prx2b)

Literature	Public Soybean EST Project. Harris,N. and Gijzen,M. Soybean peroxidase transcripts.
Protein ref.	UniProtKB: Q9XFI6
DNA ref.	Phytozome 12: Gm07 (43623494..43621674)
Cluster/Prediction ref.	UniGene: Gma.30052

Protein sequence: GmPrx35(Glyma.07G260300 / Glyma07g39020.1/ Prx2b)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	336 (319)
PWM (Da):	37446.32 (35634.3)
PI (pH):	8.48 (8.56)	Peptide Signal:	cut: 27 range:18-336

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAPKGLTFLAVLICVSALSLSPSVAGEGQNNGLVMNFYKESCPQAEDIITEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEALERE
CPGVVSCADILVLSARDGIVSLGGPHIPLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEIDPALNPDHVPHILKKCPDAIPDP
KAVQYVRNDRGTPMILDNNYYRNILDSKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEVRKQCNVANKHHDQDP*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 160 ESTs.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATATTTTTAA TGGGAATCAA TTAATTCTTT TTATGGGTAC AATTTATACA TGCTATATTA AGGGGAAGAA AAAAATCTTG AGGGGCAGCT ACCCCAAACC TTTTAATCTA GATCCATTTC TCAATGTATA ATTTTGATAT ATGTGATAAT ATTTTTCTTT TTTTTTGGGT GTGGTAAGCA TGGTGTTGTA TCACCTCTTT TTCTTGTTAT AAGAAATAAG TGATAGTATA AAATAAATTA TAAATTATTT CTTATAATAA GAAACGAAAA TAATATTATA TAATAACTAT TAGAAAAAAT ATTTTTTTTA CAGTGAAATA AATGTCATCA CATGTATTAT AATTACACAC ATATATGTTA ATATTAATTT TTTTAATATT TCAAAAGGCA TAAACGTATA ATCCATCTCA AATTATACAA GTAATCATTC ACTATTAAAA ATCATACTAC ATAGTTTCCG AAGCGTTGAA CATTAGTCAA TGTGAAAATT AAATTAATGA ATATTTAATA TTTTAGAGAT TATTTATATA ATTTTATTAT TTTAAAGGTT ATTTGAGAGA GTAATATTCT TAAATTAATA AATTTAGATT GATTATCTTT TGTGAGATAT TTTCTTTATT ATTTTTTTTA TCCATAAAAT TTGAATTCAA AATCTTATTT AAAAATCCTA AGTCTAAAAT CATTCCGATT AATGATTTGT TGGTTCAAAT TGATGATTTT GTAGAAGCTG GATTATTTTT AGAAACTCAA ATTTAAGTTT ACGCATATTA GTCAAATTTG GTGGAATCTG GGAATGAGGA AATGAAGGAA GGTTGAAAAT GACTTCACAA GCCGCACTGT GCCAAGCCAC TTGAAATGCC TGACTTTCTT TCTCAGCTGT GTTGCTCGTT GCTTTTTCCA AGTGCAAACA ACTTTTGCCA TATCTCCAAA AAATAAAAAA CCATCTAATC TATCCGAAAT CCTGAAATCT TTGTGCAAGT TCCGTAGCAT GTTATGATAG TACTTTAGTT GTTAGTAATC GTTTTTTTTT CTCTTAACAT TATATTACTT CATCATATTT ATATTTTTTA AAATATGTCC AATAATATGA AGTATTTGTG CATCTTTATC CTATTATGTT TATGTTATTT TATAAATAAA ACTTTACTAT TAAATTCTTT TAAAAAATTA ATAAAGTATA ATTATTTTAA AATAAATTAA CTGGTTGACG CATGAAATTA GTTGGGCGAC GTCACAATTC ACAAACACTT ATATTTTCCG TTGCTTCTAC GCACCAGAGT CCAAAATTTG AAGTTTTGTA ACCAAAAATA GGAAAAGAAA AGTTGCGCCG AGTCCCCCCT TAGCTAGCCT AGGCACATCA CGTGGTCATT CATTAGTTTA GTAAATGCTT CTCTCTCTCT CTTTACTATT GTCTACTGTA GTCAGATTAT TTTATACAAA CTAAAAAAAT TAATAAATAA ATATAGGATA ATTATAATTT TATAAAATTA AATTTATTAT CATTAATTTT TTTATTTTTA TAATTTATAT TATAAATATT ATAAGAAATA TCAGTAAAAA AATGGACACC CTAATTGGTA GGCAACATCT AAAAAGAAAG TATTGAGACA TAAAGCCTAT CTCTTAGTGA GTTGTTTGTG GTGTTGGATC ATGATGAAAG CATCAACATC ACGCACGCTT TAACCTATAG TTCAAAGAAA AAAGTTTAAT GGACACCTTA ATTCCTAAAC AACATTTAAA ATGAAAAATA AAAAATATAA ATATGATAAA ACTTATCATA TGACAAAAAG AGAAGCATAA AAAAAATGAA AAATATTAAA AGATGTTTAA AAATAATGAA ATATTTATAT ATAGTATATT ACTCTAGCTT AAAACTCAAT TTTACCCTAC CAAAGCTCTC TCATATCTCA TACAGACTAC
AGTAATATTT TATTTGCACT ACTACTACTA CTTTATTTAA GCAGAAGCAG GCGAGTGAGG AAGAGCGAAG AGTGAAGAGA

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTCCCAAGGGTTTAACCTTTCTGGCTGTGTTAATATGCGTTTCAGCACTGTCACTGAGTCCTTCTGTTGCGGGGGAAGGGCAAAATAATGGCCTTGTTATGAACTTCTACAAGGAA
TCATGCCCTCAGGCTGAAGACATCATCACAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCCTGGCTCAGGAACATCTTCCATGACTGTGCTGTTCAGGTAATT
AAGCTTGGTTTTTGTTCTGTGTTTGCAAGGTGCATGTTGGTCATTTTTTTTTGTCAGTTAATTTTTTATATATGAAAGTATTTGTTTTTTACTTTTTATTTTTGTGTGTGTGTGTGAGGG
TAGAGAGTTGTGATGCTTCACTGTTGCTGGACTCCACAAGAAGGAGCTTGTCTGAGAAGGAAACAGATAGAAGCTTTGGGTTGAGAAATTTCAGGTACATTGAGACCATCAAAGAAGCTT
TGGAAAGAGAATGCCCTGGAGTTGTTTCATGTGCTGATATCCTCGTTCTCTCTGCCAGAGATGGCATTGTTTCGGTAATTTACTCTTCCCAGCTTGTCCCTTTCTTTTTTGTTCTGTTCT
GTTTCCCACTAGATCTGTTTTGTTTCCTCTTTTAACAAAGTTCCCTTTTGAAAGGTAATTAAAGTCCATGTACATATACCCTGTCCATAATTCTAGCAAGATCGGTCTATTTTTAGTGTG
AGGATGAGTAGTTGGAGACTTATTTGGTCCAGATTTGTTTTAGTAATTAACTGCTTTAATTGTTGCATGCAGCTCTAGGAGGTCCCCATATCCCTCTTAAGACTGGAAGAAGGGATGGTA
GAAGGAGCAGAGCTGATGTGGTTGAGCAGTTCCTCCCAGACCACAATGAGTCCATTTCTGCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACCCCTGGCGTCGTTGCACTGCTTG
GTACTATACACTCTCCCCTCACCCATCCATGTACATACATTTATGAAATGACAACAGGCATAAAGCATATCTACATAAAGCTTCGTATATTTCTTTTAATAAATATATGTGGGATCCTCA
TGTTTAATCAGAGATAAAGCTAGATGCAAACACACATTTGCCCATAATAAAAGAAAAAAAGGATTATTCAATTAAAAATTTTACACAAGAATCATAACTCATAAATTTTGTTGACTTTTA
AAATATTTAACTTAAAAGTAATTCAAACCATAAATTTTCATTTAACATTGAACAATGAAAAAAAATGCAAGCATACAACATACATGAAAGATGCAACACTCACATATACTTACATGGGTA
CATGATATGCTAAAAGAAAGTACACGTGGCATTGTTGGCTGTGATTAATGAATGATTGAGATGAGATATTTTGTGGAACACAGGAGAGCACACAGTGTTGGTCGAACCCATTGTGTGAAG
TTGGTGCACCGTTTGTACCCAGAGATTGATCCAGCTCTGAACCCTGACCACGTCCCTCACATTCTGAAGAAGTGCCCTGATGCCATTCCAGACCCTAAGGCGGTGCAGTACGTGAGAAAC
GACCGTGGCACTCCCATGATTCTAGACAACAACTACTACAGAAACATATTAGACAGCAAGGGTCTCTTGATAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAG
AAAATGGCCAAGAGCCAAGACTATTTCTTCAAGGAGTTCTCTAGAGCCATTACCTTGCTCTCAGAGAACAACCCTCTCACTGGCACAAAGGGTGAGGTCAGAAAGCAGTGCAATGTTGCC
AACAAGCACCATGATCAGGACCCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA