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Entry information : GmPrx38 ( Glyma.09G109800 [a2.v1]/Glyma09g16810.1)
Entry ID 529
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2016-02-24 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-24 (Achraf Jemmat)
Peroxidase information: GmPrx38 ( Glyma.09G109800 [a2.v1]/Glyma09g16810.1)
Name (synonym) GmPrx38 ( Glyma.09G109800 [a2.v1]/Glyma09g16810.1)
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Seedlings
Stems
Inducer Sudden Death Syndrome disease
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx38
start..stop		 S start..stop
GmPrx71 613 0 1..332 1..332
PvPrx05 576 0 7..331 10..334
GmPrx136 551 0 4..332 3..331
MtPrx23 545 0 1..331 45..373
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 20271169..20271384 214 N° 2 20270825..20271019 193 N° 3 20269985..20270150 164 N° 4 20269167..20269585 417
complement(join(20269167..20269585,20269985..20270150,20270825..20271019,2027116 9..20271384))


exon

Literature and cross-references GmPrx38 ( Glyma.09G109800 [a2.v1]/Glyma09g16810.1)
Literature Public Soybean EST Project.
DNA ref. Phytozome 12:   Gm09 (20271813..20269515)
Protein sequence: GmPrx38 ( Glyma.09G109800 [a2.v1]/Glyma09g16810.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   331 (306)
PWM (Da):   %s   34893.03 (32098.5) Transmb domain:   %s   i5-22o
PI (pH):   %s   4.37 (4.43) Peptide Signal:   %s   cut: 26 range:26-331
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLSAINYSLLATIFLVLTLIFPSEGQLSSTFYSSTCSNVSSIVRSAVQQALQSDSRIGASLSRLHFHDCFVNGCDASILLDQGGNITQSEKNAAPNVNSIRGFDVVDNIKSSLESSCPGV
VSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQAGANSSIPSPFESLANVTSKFSAVGLDTTDLVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNSTYLATLQQNCPQSGSG
STLNNLDPSTPDTFDNNYFTNLLINQGLLQTDQELFSSNGSSTISIVNNFANNQSAFFEAFVQSMINMGNISPLTGSQGEIRTDCKKLNGS*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTTCTGCTATTAATTATTCCCTTCTTGCAACCATTTTCTTAGTGCTAACCTTAATTTTTCCTTCAGAAGGCCAATTGAGTTCAACCTTCTATTCTAGCACATGCTCCAATGTGTCT
TCTATAGTGAGGAGTGCTGTTCAGCAGGCTCTTCAATCTGATTCACGAATTGGTGCAAGCCTCTCTCGCCTCCACTTTCATGATTGCTTTGTCAATGTAAAATCCCACAACTGAAATCTC
CATTTTAATTTATTATTTTCTCAACAATTATTTAGTTTGATCATAATTTAACTTCTTAATTTGTGTTGTATTATAGGTTTCCAATTAGAAGATTAATAATTAATGATTTTTTTTTTCTGT
TTTAGGGGGGTGTGATGCGTCCATTTTGTTAGACCAAGGTGGTAACATCACACAAAGTGAGAAAAATGCTGCTCCCAACGTCAATTCCATTCGAGGCTTTGATGTTGTTGATAACATCAA
GAGCTCCCTCGAAAGTTCATGCCCTGGAGTTGTATCTTGTGCTGATATTCTTGCTCTTGCAGCAGAATCTTCTGTGTCCTTGGTAACTTTCTTGCTATCTAGCTATTACAAGATTTTCCT
TTTTATTAACATACTACTACTATATAATATACACAATTAGAATCTTTGAAAGTACTTATAAGAAGCTTATGAAAGTAATTTGTTCTTTTGAACTTTATTCCAATAATTAAATTTCTGAGT
GAAACATAATAATAGACTGATTTAATGTGAAAACTTAATGAATAAATAGTTAGTTAAATTACTTAGTTAATTGCGCACTCTCGAAATCAATGTATCAATGAATAAAATTATATTTTTTTA
TCCTAAATTTTGATAAGTTAGTCTTTTAATTCTTTACCATGATAAATTGATACTTTAATACGATTTTTAGTTGTCATTAATTAAATTTTAATTTTAACCGTTTGAATTTATATTTTAAAA
TTATCATAAAATATTAAAAAATTATATCAATGATTAAAAAAATATTTTTAAATTCAGGAACTAAAAACACACATCTCAAAACACGGGATTAAAATAATAATTAAATCATTATTTAATCTA
AAAATCGACGTAAAAGCAACTAAAGGCGTTTGATCATTTTGATTTGATGCCACGACTTTTTCATAACATCATTTATCACGTTATTTTCTACTTTCTTTAACAATGAATACTAATTATTTG
AGGCAAGACAATAATAAAAAGTGTAAAATTTTGCAGTCTCAGGAGGACCTTCATGGAACGTACTACTTGGAAGAAGGGACGGTTTAACTGCAAACCAAGCTGGTGCCAATAGTTCCATTC
CCTCTCCATTTGAGAGCCTTGCCAATGTCACTTCCAAATTCTCTGCTGTTGGCTTAGACACAACCGATCTTGTTGCATTATCTGGTAATTACAACATTTTATTCCTCAAGCAAATAAGTT
ATTATATAGTCCGCAAGTATGTGATCACGATTAATTTTCACATGACATATAGTTAAGTTTTCATATCATAAATTAAAAAATATGATTATTTATCGTACGAAAATTGGTTAAGATTATAGT
CTAAGTTAGAAAATATTATCAAATAGCTCGAGACTCTATCATATGTCTATAGTCTCAACTAGTCAATGTGACATGTATTTAAATTTATACATTTACAAGAAAGTTAATAGTATTAATTTG
ACTGGATGTTATGTGGAGATTGATGAGGATTATAATAATATTGAGAATCTAGTAATTTCTTTCTAATCAAAACATGTACTACTTTATTGTTCCTAGTTGATTCAAATTGGACTTTTTCAT
TAGGTGTGCACACACTTTTGGTCGTGCCCAATGCCAATTTTTCTCCCAAAGGTTATTCAACTTCAGTGGCACAGGAAGCCCTGATCCAACCTTGAACTCAACCTATTTGGCCACTCTTCA
GCAAAATTGTCCCCAAAGTGGGAGTGGATCTACATTGAACAACCTTGACCCTTCTACCCCTGACACTTTTGACAACAACTATTTCACCAATCTTCTCATCAACCAAGGTCTTCTCCAAAC
AGATCAAGAACTCTTCTCCTCTAATGGCTCTTCCACAATCTCCATCGTTAACAACTTTGCCAACAACCAATCAGCCTTCTTCGAAGCTTTTGTGCAGTCAATGATCAACATGGGTAACAT
CAGCCCTTTGACTGGATCCCAAGGAGAAATTAGAACTGATTGTAAGAAATTGAATGGAAGTTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTTCTGCTATTAATTATTCCCTTCTTGCAACCATTTTCTTAGTGCTAACCTTAATTTTTCCTTCAGAAGGCCAATTGAGTTCAACCTTCTATTCTAGCACATGCTCCAATGTGTCT
TCTATAGTGAGGAGTGCTGTTCAGCAGGCTCTTCAATCTGATTCACGAATTGGTGCAAGCCTCTCTCGCCTCCACTTTCATGATTGCTTTGTCAATGGGTGTGATGCGTCCATTTTGTTA
GACCAAGGTGGTAACATCACACAAAGTGAGAAAAATGCTGCTCCCAACGTCAATTCCATTCGAGGCTTTGATGTTGTTGATAACATCAAGAGCTCCCTCGAAAGTTCATGCCCTGGAGTT
GTATCTTGTGCTGATATTCTTGCTCTTGCAGCAGAATCTTCTGTGTCCTTGTCAGGAGGACCTTCATGGAACGTACTACTTGGAAGAAGGGACGGTTTAACTGCAAACCAAGCTGGTGCC
AATAGTTCCATTCCCTCTCCATTTGAGAGCCTTGCCAATGTCACTTCCAAATTCTCTGCTGTTGGCTTAGACACAACCGATCTTGTTGCATTATCTGGTGCACACACTTTTGGTCGTGCC
CAATGCCAATTTTTCTCCCAAAGGTTATTCAACTTCAGTGGCACAGGAAGCCCTGATCCAACCTTGAACTCAACCTATTTGGCCACTCTTCAGCAAAATTGTCCCCAAAGTGGGAGTGGA
TCTACATTGAACAACCTTGACCCTTCTACCCCTGACACTTTTGACAACAACTATTTCACCAATCTTCTCATCAACCAAGGTCTTCTCCAAACAGATCAAGAACTCTTCTCCTCTAATGGC
TCTTCCACAATCTCCATCGTTAACAACTTTGCCAACAACCAATCAGCCTTCTTCGAAGCTTTTGTGCAGTCAATGATCAACATGGGTAACATCAGCCCTTTGACTGGATCCCAAGGAGAA
ATTAGAACTGATTGTAAGAAATTGAATGGAAGTTGA

Retrieve as FASTA