Entry information : HsPxd02 ( PXDNL / HsVPO2)
Entry ID | 5398 |
---|---|
Creation | 2007-05-29 (Marcel Zamocky) |
Last sequence changes | 2010-11-10 (Marcel Zamocky) |
Sequence status | complete |
Reviewer | Christophe Dunand |
Last annotation changes | 2016-02-18 (Christophe Dunand) |
Peroxidase information: HsPxd02 ( PXDNL / HsVPO2)
Name (synonym) | HsPxd02 ( PXDNL / HsVPO2) | |||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Class | Peroxidasin [Orthogroup: Pxd001] | |||||||||||||||||||||||||
Taxonomy | Eukaryota Metazoa Chordata Mammalia Hominidae Homo | |||||||||||||||||||||||||
Organism | Homo sapiens (human) [TaxId: 9606 ] | |||||||||||||||||||||||||
Cellular localisation | N/D |
|||||||||||||||||||||||||
Tissue type | N/D |
|||||||||||||||||||||||||
Inducer | N/D |
|||||||||||||||||||||||||
Repressor | N/D |
|||||||||||||||||||||||||
Best BLASTp hits |
|
Literature and cross-references HsPxd02 ( PXDNL / HsVPO2)
Literature | REFERENCE 1. Venter J.C., Adams M.D., Myers E.W., Li P.W., Mural R.J., Sutton G.G., Smith H.O., Yandell M., Evans C.A., Holt R.A., Gocayne J.D., Amanatides P., Ballew R.M., Huson D.H. et al. (2001) The sequence of the human genome. Science 291 (5507): 1304-1351.
REFERENCE 2. Nusbaum C., Mikkelsen T.S., Zody M.C., Asakawa S., Taudien S., Garber M., Kodira C.D., Schueler M.G. et al. (2006) DNA sequence and analysis of human chromosome 8. Nature 439: 331-335. REFERENCE 3. Strausberg R.L., et al. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc. Natl. Acad. Sci. U.S.A. 99:16899-16903. REFERENCE 4. Kimura K., Wakamatsu A., Suzuki Y., Ota TT., Nishikawa T., Yamashita R., Yamamoto J., Isogai T., Sugano S. (2006) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Genome Res. 16:55-65. |
---|---|
Protein ref. | GenBank: NP_653252.3 UniProtKB: A1KZ92 |
DNA ref. | GenBank: AADB02011479 (148733..483133) |
mRNA ref. | GenBank: NM_144651.4 |
Cluster/Prediction ref. | UniGene: Hs.444882 |
Protein sequence: HsPxd02 ( PXDNL / HsVPO2)
Sequence Properties first value : protein second value (mature protein) |
|
||||||||||||
Sequence Send to BLAST Send to Peroxiscan |
|
||||||||||||
Remarks | Complete sequence from genomic (chromo 8, 3 introns), 5 mRNA and 27 ESTs. Two splicing forms of HsPxd02 described in UniProt file. Isoform 2 is only 1316 AA long. | ||||||||||||
CDS► Send to BLAST |
|
||||||||||||
cDNA► Send to BLAST |
|