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Entry information : GmPrx52 (Glyma18g44310.1)
Entry ID 547
Creation 2006-01-17 (Christophe Dunand)
Last sequence changes 2011-07-04 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-12-13 (Qiang Li)
Peroxidase information: GmPrx52 (Glyma18g44310.1)
Name (synonym) GmPrx52 (Glyma18g44310.1)
Class Class III peroxidase    [Orthogroup: Prx064]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Glycine
Organism Glycine max (soybean)    [TaxId: 3847 ]
Cellular localisation N/D
Tissue types Mature flowers
Seedlings
Inducers Elicitor treatment (glucan, oligosaccharides, yeast extract, Phytophthora crude extract)
Sudden Death Syndrome disease
Repressor N/D
Best BLASTp hits
Perox score E-value GmPrx52
start..stop		 S start..stop
GmPrx188 624 0 1..317 1..317
LjPrx10 525 0 1..316 1..316
AhPrx04 511 0 1..316 1..316
GrPrx38 506 0 4..317 8..324
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '547' 'join(54032444..54032650,54033844..54034035,54034210..54034375,54035007..54035392)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 54032444..54032650 205 N° 2 54033844..54034035 190 N° 3 54034210..54034375 164 N° 4 54035007..54035392 384
join(54032444..54032650,54033844..54034035,54034210..54034375,54035007..54035392 )


exon

Literature and cross-references GmPrx52 (Glyma18g44310.1)
Literature Public Soybean EST Project. Tyler,B. Not Published. Vodkin,L Functional Genomics Program for Soybean.
DNA ref. Phytozome 12:   Gm18 (54032444..54035392)
Protein sequence: GmPrx52 (Glyma18g44310.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316 (294)
PWM (Da):   %s   33326.62 (30724.1)  
PI (pH):   %s   8.65 (8.40) Peptide Signal:   %s   cut: 23 range:23-316
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MILPNIKVRFFLLFCLIGIVSAQLSSTFYGKTCPNALSTIKSEVVSAVNNERRMGASLLRLHFHDCFVQGCDASVLLDDTSSFKGEKTAGPNAGSIRGFNVIDTIKSKVESLCPGVVSCA
DILAVAARDSVVALGGPTWTVQLGRRDSTTASLSSANSDLPAPTSSLSALISSFSNKGFSSKELVALSGSHTIGQAQCSSFRTRIYNDTNIDSSFAKSLQGNCPSTGGGSTLAPLDTTSP
NTFDNAYFKNLQSKKGLLHSDQELFNGGSTDSQVNSYSSNPASFKTDFANAMIKMGNLSPLTGSSGQIRTNCRKTN*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 8 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATTCTTCCAAACATCAAAGTTCGTTTTTTCTTACTCTTTTGCCTTATTGGGATAGTGTCAGCACAGTTATCCTCTACCTTTTATGGCAAAACGTGTCCTAATGCACTTTCAACCATT
AAATCAGAAGTAGTGTCTGCTGTGAACAACGAGCGTCGTATGGGAGCCTCGTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAAAGCAAGTCAACTTTCACTATGTCCCTTTTTTC
ATTATGATTTATTTTCTCTTTCGGTACCATAAGATTATGCTTGAAGGCTTAACCTAATATATATGTATATGGGTTGCATTTACTATTTATGCACGTGTTCATATACACAAAAAAATAATC
ATTAGTTATACGAAAAAAATATATATTTTATCAAAACTACTTAGTCATTTTTCTTTTACATATATAATGTCATCGATACGACTTCAATTCGCGTATCTTGAAGAAAAAAAATCACACTTG
TTAACAATTTAAGAGATAATAATGTGATTAACTGTACTAAGCATCTCTTGAATTTGGTTCCTTCTTCAGTACAATTGTGCTTTAGTGTGATAAACTCTATTATTTGTATATACAAGCAAA
TAATCCAACACTTTATCACAGTAAATTTGACTAATTGTTACGTGTTGGATTTGGTTTGATAAAGTAAATTTTTAATGTTAGATTTAGTATGGCAAGGTATATAGTTATTTAATTATATAT
GAGTCACTAAATGGTTTATTACTCTAAATACTGTTTGGTTTTACTACAAAGGAGCCGAACTTGCATTTTTGTTACATAGTTCATTGTGGAACTTTAGTCCTTATAATATCGTAAGTATTG
TTAGTTTTTTTTTATAATAAAAATTGACATTTTATTTTCTAGTCGTTGGTTTCTCTCGGTGACTAAAATCATTATCAATATAATGTCATTTTTTTTATTTATACTGTAGAACAACACAAC
AAAACAAACCTATTATATCTAAGTTTTGTTCACATGTCTTACTATTAATTCAATGAACTGATCAATCGATATTATATTAAGAATTAAGAAATTTGTGAAATTATAAAAAGGTTGAATTTT
CAACAAAAAGAAAACCACTTGCATAATAATTTATTTTAGAAATTCCATATACAAATTTAATTTCACATCAAAATATAATGGCTAAAAGTGGACTTTTCTGGCAACAAGCATTTGCTTCCA
AATTGTCATGCAACGAAGTGATGTCGATCAGGCCAAGTCCACATCAAAAGAAAAAACAAAACACATGATAATCGTTCATTCATAATATTCTTTGGTGAAATGAAAATGACAACTAATTAA
TTAATTAAAGTGAATTCGAAAATAATAATTCTCATTTTGTTCGTACCTAATTAATGCTTTTGTTTTTTGTTTTCCATGGCAGGGATGTGATGCATCAGTACTATTGGATGACACATCGAG
TTTCAAGGGTGAGAAGACAGCAGGTCCCAACGCTGGTTCGATTAGAGGTTTTAATGTAATAGACACCATAAAGTCTAAAGTGGAGAGCTTATGCCCTGGTGTTGTTTCTTGTGCTGATAT
CCTTGCTGTAGCAGCAAGAGACTCGGTTGTAGCTCTGTAAGTATATGTATATATTTCAGCTAGGTTAAATGGTGAAATTATTTTAATTTAACTAGTGATTCTGAGTTTCAGTTTTATATA
TGCAATTAGGTTAAATATTACATGTTTGATCTATAACTTAAAAACATATATACGAGTTAGGCACTTATATTGAACAAATTTAATTTTCAGCTTGGTGGACCTACTTGGACTGTGCAATTG
GGTAGAAGAGACTCAACCACTGCAAGTTTAAGTTCTGCTAACTCAGACTTGCCTGCTCCCACTTCAAGTTTAAGTGCCCTTATCAGTTCTTTCTCCAACAAAGGTTTTTCATCTAAAGAA
CTGGTTGCTCTTTCAGAGGTAGCTAGCTAGCTAGATGCATATTTAATTAATCCAGCATATGCATTAATTTTAATACATTTTTTTATGTACATTTTTTTAACATATTTTTTTATTAGTTTG
AAATTTATGTACATTTTAAAACTAAGAATGGAGCTTGCCTATGAGTCTTACATCAATAATAAAAAAAAATTTTGAAACAAGTGTATAGCTAATATTAATTTCTCTTTCAAACATTGTATA
TTACATTTTGAAGAATATATACTAGTCAAATACTCTCTAATATTTTCTTTAATCTGTGGGTCACTCTATATGCATGGAACCATTCAAATGAGGAATACAACTAACATATTTAAGTAAGAT
TGACTCACATGAATTTCATGCGATTAAATAATGTGTTCGAGAGAAATTATGTGTTAGATAATATTTCTCGTTTCACCTCTTGATAAGAATGGACAATTTGATCCGAAAAATATGTCTATG
ATCAAATGTTATATTTAGTCTTCATGGGTGTTAGCAACACTTCTCAATCACCATGTCCAAAATTTATAATTTTTAATAAATTTTAGTTGATAATCAAGAGAGTATTACTTTTTTAGTTTT
GCCAATTGCCTTGAACTTCTTTCTAATTTCTAATTAAAACCTATTTCAGGATCGCACACAATTGGGCAAGCTCAATGTTCAAGTTTCAGAACAAGGATTTACAACGACACCAACATAGAT
TCCTCTTTTGCAAAATCATTGCAAGGAAATTGCCCTAGCACAGGTGGTGGCAGCACATTGGCCCCTCTTGACACCACCAGCCCAAACACCTTCGACAATGCTTACTTCAAGAACTTGCAG
AGCAAAAAGGGTCTCTTGCACTCAGATCAAGAGCTCTTCAACGGAGGATCCACAGACTCTCAAGTAAATTCCTACAGCAGTAATCCTGCAAGTTTCAAAACTGACTTTGCCAATGCAATG
ATTAAAATGGGGAACCTTAGTCCACTCACTGGGTCTAGTGGCCAAATTAGGACCAATTGTAGGAAGACCAACTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGATTCTTCCAAACATCAAAGTTCGTTTTTTCTTACTCTTTTGCCTTATTGGGATAGTGTCAGCACAGTTATCCTCTACCTTTTATGGCAAAACGTGTCCTAATGCACTTTCAACCATT
AAATCAGAAGTAGTGTCTGCTGTGAACAACGAGCGTCGTATGGGAGCCTCGTTGCTCCGTCTTCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTACTATTGGATGACACA
TCGAGTTTCAAGGGTGAGAAGACAGCAGGTCCCAACGCTGGTTCGATTAGAGGTTTTAATGTAATAGACACCATAAAGTCTAAAGTGGAGAGCTTATGCCCTGGTGTTGTTTCTTGTGCT
GATATCCTTGCTGTAGCAGCAAGAGACTCGGTTGTAGCTCTTGGTGGACCTACTTGGACTGTGCAATTGGGTAGAAGAGACTCAACCACTGCAAGTTTAAGTTCTGCTAACTCAGACTTG
CCTGCTCCCACTTCAAGTTTAAGTGCCCTTATCAGTTCTTTCTCCAACAAAGGTTTTTCATCTAAAGAACTGGTTGCTCTTTCAGGATCGCACACAATTGGGCAAGCTCAATGTTCAAGT
TTCAGAACAAGGATTTACAACGACACCAACATAGATTCCTCTTTTGCAAAATCATTGCAAGGAAATTGCCCTAGCACAGGTGGTGGCAGCACATTGGCCCCTCTTGACACCACCAGCCCA
AACACCTTCGACAATGCTTACTTCAAGAACTTGCAGAGCAAAAAGGGTCTCTTGCACTCAGATCAAGAGCTCTTCAACGGAGGATCCACAGACTCTCAAGTAAATTCCTACAGCAGTAAT
CCTGCAAGTTTCAAAACTGACTTTGCCAATGCAATGATTAAAATGGGGAACCTTAGTCCACTCACTGGGTCTAGTGGCCAAATTAGGACCAATTGTAGGAAGACCAACTAA

Retrieve as FASTA