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Entry information : ZmRboh10(Zm00001d023859 / GRMZM2G300965)
Entry ID 5491
Creation 2007-07-09 (Christophe Dunand)
Last sequence changes 2010-12-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2023-01-19 (Christophe Dunand)
Peroxidase information: ZmRboh10(Zm00001d023859 / GRMZM2G300965)
Name ZmRboh10(Zm00001d023859 / GRMZM2G300965)
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Cell culture
Endosperm
Mixed tissues
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmRboh10
start..stop		 S start..stop
SbRboh08 1576 0 17..902 3..916
BdiRboh04 1421 0 39..902 11..855
TaRboh13-1D 1397 0 18..902 2..865
TaRboh13-1A 1394 0 18..902 2..877
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5491' 'complement(join(24649918..24650698,24650804..24651018,24651113..24651931,24652018..24652131,24652231..24652279,24652430..24652589,24652667..24653237))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 24652667..24653237 569 N° 2 24652430..24652589 158 N° 3 24652231..24652279 47 N° 4 24652018..24652131 112
N° 5 24651113..24651931 817 N° 6 24650804..24651018 213 N° 7 24649918..24650698 779  
complement(join(24649918..24650698,24650804..24651018,24651113..24651931,2465201 8..24652131,24652231..24652279,24652430..24652589,24652667..24653237))


exon

Literature and cross-references ZmRboh10(Zm00001d023859 / GRMZM2G300965)
Literature Wilson,R.K. The sequence of Zea mays clone
DNA ref. GenBank:   AC204045.1 (126078..129361)
Cluster/Prediction ref. UniGene:   Zm.80129
Protein sequence: ZmRboh10(Zm00001d023859 / GRMZM2G300965)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   902 (306)
PWM (Da):   %s   100262.39 (33088.8) Transmb domain:   %s   o358-380i491-513o541-563i727-744o
PI (pH):   %s   9.07 (6.50) Peptide Signal:   %s   cut: 23 range:23-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNAMQDLPSIAMSSNQNESGGGGGAGPPLPTAFKSPSTDGKSGSR
RSTRFKDEDEYVEVTLDVRDGGGGGDDVAVLAIKDDVRDDTQDAASLLDRPAPGGAGGGLSSKLRAARARLGRIA
SGKRAAVPLSALLRRDPDRARLDRSVVTALRGLQFLNQAAV
TEGWPEVEKRFHRLAVDGFLLRSRFGQCIGMVGSEEFAAQIFDALARRRGITAMVLTKDQVREFWEQLSDPGFDAKLQTFFDMVDKNADGQITEEELKVLTLTASANKLSKILERVDEYTALIMEELDPDSLGYIEIANLESLLLQPPSQAPTRLVTHSSNISQLISQRLAPARDDGPLRRGARAVLYFAEDNWKRVWV
MALWLAINAGLFTWKFLAYRRHPTFDVMGYCVCVAKGGAETTKFNMALILLPVCRNTITWLRSRTRLGAAVPFNDNINFHKVVAGGVAVGVALHAVTHLTCDFPRLLHASAAAYEPMKAY
FGQRRIPNYWWFVRGVEGITGVIMVVLMAVAYTLAHPWFRRGKLSEGNPLRRLSGFNMFWYSHHLFVIVYVAFVVHGVCLYINRTWYKQTTWMYLAIPILLYAGERLLRALRSHGLTTVR
IEKVALYPGNVIAIHMSKPHGFSYKSGQYIYVNCGEVSPFEWHPFTITSAPGDDYLSMHIRCRGDWTASFRALFAQVCRPPAAGQSGLLRADFASSTAAGGGGKLPKLLIDGPYGAPAQD
YRKYDVLLLIGLGIGATPLISIVKDVLNNISDNKDEEQPAEFMTRRVYFYWCTREEGSFEWFRGVMNEVAERDARGDVVELHNHCTSVYEEGDARSALLVMLQALHHAKSGVDVVSGTRV
RTHFARPNWRDVFKRVACNHQGQRVGVFYCGDQKVTPELRRLSQDFSHKTTTKFVFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 10, introns) and 12 ESTs. Cultivar="B73", "F-352 near isogenic line", "BMS (Black Mexican Sweet)".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATGCCATGCAGGACCTTCCATCCATTGCCATGTCGTCAAACCAGAACGAGAGCGGCGGCGGCGGCGGCGCGGGACCGCCGCTGCCGACGGCGTTCAAGAGCCCGTCCACGGACGGC
AAGAGCGGCAGCCGCCGGAGCACGCGGTTCAAGGACGAGGACGAGTACGTGGAGGTCACGCTCGACGTCCGGGACGGCGGCGGCGGCGGCGACGACGTCGCCGTCCTGGCCATCAAGGAC
GACGTCCGCGACGACACGCAGGACGCCGCGTCGCTCCTGGACCGCCCGGCGCCCGGCGGGGCGGGGGGCGGCCTGTCCTCCAAGCTCAGGGCAGCGCGCGCGCGCCTCGGCCGCATCGCG
TCGGGGAAGCGCGCCGCGGTGCCGCTCTCGGCGCTGCTCCGCCGCGACCCCGACCGCGCCAGGCTCGACAGGAGCGTCGTCACCGCGCTCAGGGGCCTCCAGTTCCTCAACCAGGCCGCC
GTCACCGAGGGCTGGCCCGAGGTCGAGAAGCGCTTCCACCGCCTCGCCGTCGACGGCTTCCTCCTCCGCTCGCGATTCGGCCAGTGCATCGGTGAGTCACCGTCCACCACTCTTCTTTCT
TGCATCTCTCTCTCTCTCTCCACTGCTTCTCTAAACCATTTGCTGCAGGGGGATGGTCGGATCCGAGGAGTTTGCGGCGCAGATCTTCGACGCCCTGGCACGGCGAAGGGGGATCACGGC
AATGGTGCTCACCAAGGATCAGGTCCGGGAGTTCTGGGAGCAGCTCTCTGATCCAGGATTCGATGCCAAGCTTCAGACCTTCTTTGACATGTATGTCATGACTCATGACTGGTTTACCCA
CTCCTATAGTCCAGTTTTTCCTCTGCTACCAGTGGTCAAGTCAAGTGCATTCCGATACGACTTTCAGAAACTTTTAAGTCTGTTGATGTCTGAACTTGCTTGATTGTTAACTTGTTGCAG
GGGGTTGACAAGAATGCCGATGGTCAGATCACTGAGGAGGAGCTCAAGGAGGTAATGTAACTAGTCGATGAAATGGATCAATGGTCCCCAACAAACATTGCTCAATTCAGTTATAACAAT
CTAAACTTTCTGAATTTCTTGCACCATCAGGTGTCCTCACTCTGACTGCCTCTGCGAACAAGCTGTCCAAGATCCTGGAGCGTGTGGACGAGTACACGGCGCTGATCATGGAGGAGCTCG
ATCCTGACAGCCTTGGCTACATCGAGGTTATTACTCTTTGCTTTGCAGTTTGCTTGCCCTCCCAATTCTGTATCAGCTTGACACTGACCTCCGAACCAATCAAACAAAACAGATATCGCG
AACCTGGAGTCGCTGCTGCTGCAGCCGCCGTCGCAGGCGCCGACGAGGTTGGTGACGCACAGCTCCAACATCAGCCAGCTGATCAGCCAGAGGCTGGCGCCAGCGCGCGACGACGGCCCG
CTCCGGCGCGGCGCCAGGGCCGTGCTCTACTTCGCGGAGGACAACTGGAAGCGCGTCTGGGTGATGGCGCTCTGGCTGGCCATCAACGCCGGACTCTTCACCTGGAAGTTCCTCGCGTAC
CGGCGCCACCCCACGTTCGACGTCATGGGCTACTGCGTCTGCGTCGCCAAGGGCGGCGCCGAGACCACCAAGTTCAACATGGCGCTCATCCTGCTCCCCGTGTGCCGGAACACCATCACG
TGGCTGCGGTCCCGGACCAGGCTCGGCGCCGCCGTCCCGTTCAACGACAACATCAACTTCCACAAGGTGGTCGCCGGCGGCGTGGCGGTCGGCGTGGCGCTGCACGCCGTGACGCACCTC
ACGTGCGACTTCCCGCGGCTGCTGCACGCCAGCGCCGCCGCGTACGAGCCCATGAAGGCGTACTTCGGCCAGCGCCGGATCCCCAACTACTGGTGGTTCGTCAGGGGCGTGGAGGGGATC
ACCGGCGTCATCATGGTCGTGCTCATGGCCGTCGCCTACACGCTGGCGCACCCGTGGTTCCGCCGGGGGAAGCTCAGCGAGGGCAACCCGCTGCGCCGGCTCAGCGGCTTCAACATGTTC
TGGTACTCGCACCACCTCTTCGTCATCGTCTACGTCGCCTTCGTCGTCCACGGCGTCTGCCTCTACATCAACAGGACGTGGTACAAACAGACGGTAAAGCATTTCAGTGGCTTAGCTTGC
TTTGAGAATTTATTCTAATCAACTTTTCAGTGACTTTCAGTTCCTCACAACAAATGCGCATTTTCAGACACATGGATGTACCTCGCCATTCCCATCCTTCTCTACGCCGGCGAGCGGCTT
CTCCGGGCGCTGAGGTCCCATGGCCTCACCACCGTGAGGATCGAGAAGGTTGCCCTGTACCCCGGGAATGTCATCGCCATTCACATGAGCAAGCCGCATGGGTTCAGCTACAAGAGCGGG
CAGTACATCTACGTCAACTGCGGCGAGGTCTCGCCCTTCGAGTGGTAAAACCCGCCTCCGTCATTATTTTGCCGGGCCCGGCGTCGGCGACGGAGATCGCGCGCCATGGATGTTGATCTA
TCAGTTGCTCAATCCATTCGTGGCTGCAGGCGCACCCGTTCACCATCACCTCGGCGCCCGGCGACGACTACCTGAGCATGCACATCCGGTGCCGCGGCGACTGGACGGCCAGCTTCAGGG
CGCTCTTCGCGCAGGTGTGCCGGCCGCCCGCCGCCGGCCAGAGCGGCCTCCTGCGGGCCGACTTCGCGTCCTCCACGGCGGCCGGCGGCGGCGGGAAGCTGCCGAAGCTGCTGATCGACG
GGCCCTACGGCGCCCCCGCGCAGGACTACCGCAAGTACGACGTGCTCCTCCTCATCGGTCTCGGCATCGGCGCCACCCCGCTCATCAGCATCGTCAAGGACGTGCTCAACAACATCTCGG
ACAACAAAGACGAAGAGCAGCCGGCGGAGTTCATGACGCGGCGCGTGTACTTCTACTGGTGCACGCGGGAGGAGGGCTCCTTCGAGTGGTTCCGCGGCGTGATGAACGAGGTGGCGGAGC
GCGACGCCCGCGGCGACGTGGTGGAGCTCCACAACCACTGCACCAGCGTGTACGAGGAAGGCGACGCGCGGTCGGCGCTGCTGGTGATGCTGCAAGCGCTGCACCACGCCAAGAGCGGCG
TCGACGTGGTGTCCGGGACGCGGGTGCGCACGCACTTCGCGCGGCCCAACTGGCGGGACGTCTTCAAGCGGGTGGCCTGCAACCACCAGGGCCAGCGCGTCGGCGTCTTCTACTGCGGCG
ACCAGAAGGTCACGCCGGAGCTCCGACGCCTGTCGCAGGACTTCTCGCACAAGACCACCACCAAGTTCGTCTTCCACAAGGAGAACTTCTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAATGCCATGCAGGACCTTCCATCCATTGCCATGTCGTCAAACCAGAACGAGAGCGGCGGCGGCGGCGGCGCGGGACCGCCGCTGCCGACGGCGTTCAAGAGCCCGTCCACGGACGGC
AAGAGCGGCAGCCGCCGGAGCACGCGGTTCAAGGACGAGGACGAGTACGTGGAGGTCACGCTCGACGTCCGGGACGGCGGCGGCGGCGGCGACGACGTCGCCGTCCTGGCCATCAAGGAC
GACGTCCGCGACGACACGCAGGACGCCGCGTCGCTCCTGGACCGCCCGGCGCCCGGCGGGGCGGGGGGCGGCCTGTCCTCCAAGCTCAGGGCAGCGCGCGCGCGCCTCGGCCGCATCGCG
TCGGGGAAGCGCGCCGCGGTGCCGCTCTCGGCGCTGCTCCGCCGCGACCCCGACCGCGCCAGGCTCGACAGGAGCGTCGTCACCGCGCTCAGGGGCCTCCAGTTCCTCAACCAGGCCGCC
GTCACCGAGGGCTGGCCCGAGGTCGAGAAGCGCTTCCACCGCCTCGCCGTCGACGGCTTCCTCCTCCGCTCGCGATTCGGCCAGTGCATCGGGATGGTCGGATCCGAGGAGTTTGCGGCG
CAGATCTTCGACGCCCTGGCACGGCGAAGGGGGATCACGGCAATGGTGCTCACCAAGGATCAGGTCCGGGAGTTCTGGGAGCAGCTCTCTGATCCAGGATTCGATGCCAAGCTTCAGACC
TTCTTTGACATGGTTGACAAGAATGCCGATGGTCAGATCACTGAGGAGGAGCTCAAGGAGGTCCTCACTCTGACTGCCTCTGCGAACAAGCTGTCCAAGATCCTGGAGCGTGTGGACGAG
TACACGGCGCTGATCATGGAGGAGCTCGATCCTGACAGCCTTGGCTACATCGAGATCGCGAACCTGGAGTCGCTGCTGCTGCAGCCGCCGTCGCAGGCGCCGACGAGGTTGGTGACGCAC
AGCTCCAACATCAGCCAGCTGATCAGCCAGAGGCTGGCGCCAGCGCGCGACGACGGCCCGCTCCGGCGCGGCGCCAGGGCCGTGCTCTACTTCGCGGAGGACAACTGGAAGCGCGTCTGG
GTGATGGCGCTCTGGCTGGCCATCAACGCCGGACTCTTCACCTGGAAGTTCCTCGCGTACCGGCGCCACCCCACGTTCGACGTCATGGGCTACTGCGTCTGCGTCGCCAAGGGCGGCGCC
GAGACCACCAAGTTCAACATGGCGCTCATCCTGCTCCCCGTGTGCCGGAACACCATCACGTGGCTGCGGTCCCGGACCAGGCTCGGCGCCGCCGTCCCGTTCAACGACAACATCAACTTC
CACAAGGTGGTCGCCGGCGGCGTGGCGGTCGGCGTGGCGCTGCACGCCGTGACGCACCTCACGTGCGACTTCCCGCGGCTGCTGCACGCCAGCGCCGCCGCGTACGAGCCCATGAAGGCG
TACTTCGGCCAGCGCCGGATCCCCAACTACTGGTGGTTCGTCAGGGGCGTGGAGGGGATCACCGGCGTCATCATGGTCGTGCTCATGGCCGTCGCCTACACGCTGGCGCACCCGTGGTTC
CGCCGGGGGAAGCTCAGCGAGGGCAACCCGCTGCGCCGGCTCAGCGGCTTCAACATGTTCTGGTACTCGCACCACCTCTTCGTCATCGTCTACGTCGCCTTCGTCGTCCACGGCGTCTGC
CTCTACATCAACAGGACGTGGTACAAACAGACGACATGGATGTACCTCGCCATTCCCATCCTTCTCTACGCCGGCGAGCGGCTTCTCCGGGCGCTGAGGTCCCATGGCCTCACCACCGTG
AGGATCGAGAAGGTTGCCCTGTACCCCGGGAATGTCATCGCCATTCACATGAGCAAGCCGCATGGGTTCAGCTACAAGAGCGGGCAGTACATCTACGTCAACTGCGGCGAGGTCTCGCCC
TTCGAGTGGCACCCGTTCACCATCACCTCGGCGCCCGGCGACGACTACCTGAGCATGCACATCCGGTGCCGCGGCGACTGGACGGCCAGCTTCAGGGCGCTCTTCGCGCAGGTGTGCCGG
CCGCCCGCCGCCGGCCAGAGCGGCCTCCTGCGGGCCGACTTCGCGTCCTCCACGGCGGCCGGCGGCGGCGGGAAGCTGCCGAAGCTGCTGATCGACGGGCCCTACGGCGCCCCCGCGCAG
GACTACCGCAAGTACGACGTGCTCCTCCTCATCGGTCTCGGCATCGGCGCCACCCCGCTCATCAGCATCGTCAAGGACGTGCTCAACAACATCTCGGACAACAAAGACGAAGAGCAGCCG
GCGGAGTTCATGACGCGGCGCGTGTACTTCTACTGGTGCACGCGGGAGGAGGGCTCCTTCGAGTGGTTCCGCGGCGTGATGAACGAGGTGGCGGAGCGCGACGCCCGCGGCGACGTGGTG
GAGCTCCACAACCACTGCACCAGCGTGTACGAGGAAGGCGACGCGCGGTCGGCGCTGCTGGTGATGCTGCAAGCGCTGCACCACGCCAAGAGCGGCGTCGACGTGGTGTCCGGGACGCGG
GTGCGCACGCACTTCGCGCGGCCCAACTGGCGGGACGTCTTCAAGCGGGTGGCCTGCAACCACCAGGGCCAGCGCGTCGGCGTCTTCTACTGCGGCGACCAGAAGGTCACGCCGGAGCTC
CGACGCCTGTCGCAGGACTTCTCGCACAAGACCACCACCAAGTTCGTCTTCCACAAGGAGAACTTCTGA

Retrieve as FASTA