View Redoxidase 5696

Entry information : MtGPx01 (Medtr1g014210.1[4.0] / MtGPx01)

Entry ID	5696
Creation	2007-08-13 (Christophe Dunand)
Last sequence changes	2007-08-13 (Christophe Dunand)
Sequence status	complete
Reviewer	Messaoudi
Last annotation changes	2014-07-31 (Messaoudi)

Peroxidase information: MtGPx01 (Medtr1g014210.1[4.0] / MtGPx01)

Name (synonym)

MtGPx01 (Medtr1g014210.1[4.0] / MtGPx01)

Class

Plant glutathione peroxidase [Orthogroup: Gpx2001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Medicago

Organism

Medicago truncatula (barrel medic) [TaxId: 3880 ]

Cellular localisation

N/D

Tissue types

Flowers
Leaves
Roots
Stems
Whole plant

Inducers

Colletotrichum inoculation
Pathogen interaction

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	MtGPx01 start..stop	S start..stop
MsGPx01	460	1.75e-167	2..235	1..234
PsGPx01	421	5.77e-152	1..236	1..236
LjGPx01	354	8.87e-126	1..227	1..226
CsGPx01	334	1.28e-117	3..236	5..245

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5696' 'complement(join(3066687..3066716,3067766..3067933,3068013..3068131,3069094..3069155,3069546..3069622,3070320..3070574))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3070320..3070574	253	N° 2	3069546..3069622	75	N° 3	3069094..3069155	60	N° 4	3068013..3068131	117
N° 5	3067766..3067933	166	N° 6	3066687..3066716	28
complement(join(3066687..3066716,3067766..3067933,3068013..3068131,3069094..3069 155,3069546..3069622,3070320..3070574))

Literature and cross-references MtGPx01 (Medtr1g014210.1[4.0] / MtGPx01)

Literature	Shaull S., Lin S., Dixon R., May G., Sumner L., Gonzales B., Cook D., Kim D., Roe B.A.; Submitted (MAR-2006) to the EMBL/GenBank/DDBJ databases.
Protein ref.	GenPept: ABE93916 UniProtKB_Uniparc: Q1SI06
DNA ref.	GenBank: AC143339.12 (78645..82824) Phytozome 12: chr1 (3070574..3066687)
Cluster/Prediction ref.	Phytozome Gene 12: 31100806 UniGene: Mtr.9195

Protein sequence: MtGPx01 (Medtr1g014210.1[4.0] / MtGPx01)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	236
PWM (Da):	26379.53
PI (pH):	9.84

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MVSMASSTTFFTPLHNFNQARTNSIPSISLPFVKSSIPSSKSPFFQHGFSQPTSFDFPKAVLKSRSFSVNARAVTDKSIYDFTVKDIDKKDVPLSKFKGKVLLIVNVASRCGLTSSNYTE
LSHLYENFKDGLEVLAFPCNQFGMQEPGSNEEIKKFACTRFKAEFPIFDVDVNGPFTAPVYQFLKSSSGGFFGDLVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 1, 5 introns) and 22 ESTs. Cultivar="A17".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGTTTCCATGGCTTCTTCCACAACATTCTTCACACCTCTTCACAATTTCAATCAAGCTAGAACAAATTCAATACCTTCAATTTCTTTGCCTTTTGTAAAATCCTCAATTCCTTCTTCA
AAGTCACCTTTTTTTCAACATGGCTTTTCTCAACCAACTTCTTTCGATTTTCCTAAGGCTGTTTTGAAGTCAAGGTCTTTCTCTGTCAACGCTAGAGCTGTTACTGATAAATCCATTTAT
GATTTTACTGTAAAGGTATCATTTTTAATTTTCAATTTTAATGTTGTGTTAGAATTGAGTAGATTTTTTTTTTTTTTTTTTTTGTGTGGTTTTTGTTGTGATAATTTGTTAAGGGTTTAT
CATGATAAGTGTTAATGGATAAGTTTTTTATATAACGGAAGATAAAATAAAGTTAATTGTTGTTTTCATAAGCTATTTGGGAGAACTTATAATAATTAAGCTGAAAACAGCTTATGAACA
TGTCATAAGTTGTTTATTATGATAGGTTTTATGGATAAGCTGTTTATATAACGGAAGATAAAATGAAGTTAAATTGTTTTTCGTATATGCTATAAGCTGTTTTCGTAAGCTATCTTGGAG
AACAGGGCCCGTTTGGATTGGCTATTTTTTTTTTTTAGCTTATACAAATAAGTAAGCTTTAATGTATTATTCATAAGCTTGTCAAGGTAGTTTATGAAAAAACAGCTTATGAAGATACAA
TTTTCACTAGTGAGAACTTATGAATTAACATAAAAGCTTATTTATTGTCATAAGCTGTTTTCGTGAATTCTCCCAGACAGTCTCACAATGTTTATGCTAGTAGATGAGTGCAGATAAGCC
AATCGAAACAGGCATATAGTTTTGTTTAACGGAGGAACCCTTTTTTGGAATTGAAGAAAAAAATGTTAATTTATTTGTTATAAGATGATCATACTATTATTATGTGGTGCAGGAGATATT
GATAAGAAGGATGTGCCTCTTAGCAAATTCAAGGGGAAGGTTCTTTTGATTGTTAATGTTGCTTCAAGATGGTATGTATTATTATTCACTTTATATTTGTGGTCGGCCCTTTTTTTTTCA
ATTGTAATGTTCGGGAGGGATTTGCAATTTAGAACCATCACTTTCTCACTCCTCTAATGTAAGACATCAAATTCCCCTTAGTTACACACACCTCTAGTTTGTTATACAAAAATAGAGTCG
GTGACTTTGTGTGTGACTTGATGAGAGCATGAATTTGGTGTCACTTATCCAACAAGTTAGAGTGGTGAGTCTTCATTCAAGTATGCTCTATTTAAGCATACTTGAGGAGAGATAAGTCAG
TTTCTCCTGCTATTTGAAAAGGTCTAATCAAATAACTTGAAAGTTATGTCAAAGTTTATGGTGAGTTACGTTTCTATTGAATGGTTTCCTTTGAATGGCAGCGCGGTTTGACATCATCAA
ACTACACGGAACTCTCACACTTATATGAAAATTTTAAAGACAAAGGTACGTTACTTATGGATCATAGTTATTTGTTTATATTTCTTATATTTTTTATTTTGACTATTGGTCACTACCTGT
TATCTGGATCTTGTACCCTTCCTTCCTATCGAAACATTTCTCTATAGGCTAAACATATCTTTATATGGAAAGCTATTGGTTATGCTTGTAAAGCACATGTCCATTTTAACCAACGGGGTT
GAGTCTAGCAGATGTGCTAGTCCCCCCAATTGACAAACACATTTTGAATCTTCACTGGAAGAGATGCTCGTATTAGTGTCTAATCGTGTCTCAAATAGGATTGGCTTCTGTATAAGGATA
TCCTGGGGAAACCTCAAATAAAAAATGCATGTGTTTTCGTGGGTAATGCTATATGCAATTTATACAGACTACCTATCTTGCTTTATTTCCACCATTTGCAATTTAGGATATTAACTTGTC
TGACACTAGTATTGTTATTCTCATTCCCCTGCTTTCTGTTTGGCATTTAACGGTGTTTGTTGTGGAGATGGAAAACATAAAAGTGAAAAATTAGGCAGGGGGTAAAGTGAACTAATGAAG
AAGATGGAAAACTTTTCATTTTACCTTGTTTTGTTTTGTAATTTGGGGCTGAGAAGCTATTTGTTTGCAGCTTTCTGAGAGCTTTTTAATAGGAAAACAATTTCCCCCCTAAAAGTAACT
GAACAAAAATGTGCATAGTTGCATTCTGATTACAATTTTGGTGTTGAAGAATTTGCTAAAGGATAGATAGACTAATGTAAGGAGCATATCAGGGTCACTATATGGTGGAACATGAGTGAG
CTCTTGCTGGAAAATTAAATTTTTTCCAAATGATAGATTCAAAAGTGACTGAAATTTGATTTTCTACTTTGTTGTTTCTCTTTGAACACGGCTTTCAGATTTTTAGTTCAAAAAACATTT
TTGTACGAGCCACACATTTTTATTGTCCTTGTGCATTTTCTTTCCAGGTGTTTGGAGGTTCTAGCTTTCCCTTGCAATCAATTTGGCATGCAGGAGCCTGGATCAAATGAAGAAATTAAG
AAATTCGCTTGCACTAGGTTCAAAGCAGAATTTCCAATTTTCGATAAGGTTCGATAATGTTTCTTTATCTAGTAGTTCAGAATAGATTACATGTGAGTAAACCAAGTACTGAAGTTTTGT
AAAACAGGTGTTGATGTAAATGGACCATTTACTGCTCCAGTATACCAGTTTCTGAAGTCAAGTTCTGGAGGGTTTTTTGGTGATCTTGTCAAGTGGAATTTTGAGAAATTCTTGGTTGAT
AAAAATGGTAAAGTTGTTGAACGATACCCACCAACAACCTCTCCTTTTCAAATTGAGGTATGTTAAACTTTCCAACAGCATCAAAAGTCTAGCTTCTAATTTTTACGGTGGCAATGAATT
ATTAACTAGTTAGGTACCTCCTCAAGTATGTCAATGTGATTTTCCGGACAAAATTGAAGATGAGAGTAATACATCTTTAGTGGTGTTTTAAGCTAAAAGAAAATGTTCAGAAAACTGTCT
TTGAGCTGATTTTAAGCTGTATTTGATTATATCGGAAAATTTAGCTCTGAAGATTCACTATCGAAATTTTGTGCTGAAAATTCTGACGCTAAAATTAAGTGTTTAAAATTCTCTCATTTA
AATTCAAGTAGTTTCTCACTCACGTAAATTTTTAGTACATATAAAACAAATATATAGTATTATTTTCAGCACAGCTGAATTTTGAAATTAGCCCTATATATGATAGTCAAGACAACAAGT
TATTTAATAAAGTTACACTGATTAATACCTCTGCCACTCATATGTATCATAAATGAAGCTTTTACTGGCAAGGGACAAACAATTGAGGCTTTAGTGAAGAAGAAAATGAGTTGTTCTTAG
GTACTAACAAATTGTTGATATGGCGTATAGTTTCTTATTTGAATAACTTGGTATGGTATGTATGATATGGTATCATTGTATGTCAGTATGTGAGAGTAAGGATAATAGTATGTATGACTA
AGGTTGACTTTAAGAGTTGACTTGAACATAACACTTATATGATAAACACTTAGTTAAGCAGTTTGCCTGTTTTCACTAAACTTAATTAATTAAGGGCTTCAGCATACCAGTTTTCACTCT
ACCAGAGTCTGATGTAAATTGCCATTGATTTGTTGAGTTGGTTATACTCTACCAAAGCCAACAATATCACCAGATCAAGCTTCCACATTGGATTTCTTTTTGCAATTACAAGAAACTATA
TTGGTTCATAAATAATATAAGGGGATTTCTTATTGCAATAACAAGAAACTATAATGATAATGTATCCACGATTAATATCCGTATACTATGGACTTCCTAAAACATTTTATGCTTAATCTG
ATCTACCCCGTTTCACATCTTTGCAGAAAAGGATATCCAGAAGTTACTTGCTGCGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA