1. Browse the Database
  2. View Redoxidase
Entry information : EcabPxd01
Entry ID 5825
Creation 2007-10-08 (Marcel Zamocky)
Last sequence changes 2007-10-08 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2007-10-09 (Christophe Dunand)
Peroxidase information: EcabPxd01
Name EcabPxd01
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Equidae Equus
Organism Equus caballus    [TaxId: 9796 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EcabPxd01
start..stop		 S start..stop
AImePxd01 2706 0 8..1431 43..1466
FcaPxd01 2700 0 20..1431 37..1448
HsPxd01 2690 0 9..1431 57..1479
BtPxd 2679 0 9..1431 54..1475
Literature and cross-references EcabPxd01
Literature Lindblad-Toh,K., Wade,C.M., Di Palma,F., Gnerre,S. and Lander,E.S. The Genome Sequencing Platform, The Genome Assembly Team. The Genome Sequence of Equus caballus (horse), Assembly Version 2.0.
Protein ref. GenBank:   XP_001503092.1
DNA ref. GenBank:   AAWR02004595 (36623..83604)
mRNA ref. GenBank:   XM_001503042
Protein sequence: EcabPxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1431 (304)
PWM (Da):   %s   159426.49 (32332.2)  
PI (pH):   %s   6.67 (8.40) Peptide Signal:   %s   cut: 29 range:29-332
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSVPEEARVP ALSSTTSMMD LRFNRIREIQ PGAFRRLRNL NTLLLNNNQI KSIPGGSFED LENLKYLYLY KNEIQSIDRQ AFKGLSSLEQ LYLHFNQIET LDPESFQHLP KLERLFLHNN  RITHLVPGTF NHLESMKRLR LDSNALHCDC EILWLADLLK TYAKSGNAQA AATCEHPRRI QGRSVATITP EELDCERPRI TSEPQDADVT SGNTVFFTCR AEGNPKPEII WLRNNNELSM  KTDSRLNLLD DGTLMIQNTQ ETDQGIYQCM AKNVAGEVKT QEVTLRYFGS PARPAFVIQP QNTEVLVGES VTLECSATGH PVPRITWTKG DQTPVPEDPR VRVTPSGGLY IQNVAQEDSG  EYACTASNSI GSIHATAFII VQALPQFTVT PQDRAVIEGQ TVDFQCEAKG YPQPVIAWTK GGSQLSVDRR HLVLSSGTLR ISGVALHDQG QYECQAVNII GSQRVVAHLT VQPRVTPVFA  SIPSDMTVEV GSNVQLPCSS QGEPEPAITW NKDGVQVTES GKFHISPEGF LTIHDVGTAD AGRYECVARN TIGQASVSMV LSVNVPDVSR NGDPFVATSI VEAIATVDRA INSTRTHLFD  SRPRSPNDLL ALFRYPRDPY TVEQARAGEI FERTLQLIQE HVQHGLMVDL NGTSYHYNDL VSPQYLSLIA NLSGCTAHRR VNNCSDMCFH QKYRTQDGTC NNLQHPMWGA SLTAFERLLK  SVYENGFNTP RGINPGRLYH GHPLPMPRLV STSLIGTEAI TPDEQFTHML MQWGQFLDHD LDSTVVALSQ ARFSDGQHCS SVCGNDPPCF SVAIPPNDPR VRSGARCMFF VRSSPVCGSG  MTSLLMNSVY PREQINQLTS YIDASNVYGS TDHEARAIRD LASHRGLLRQ GIVQRSGKPL LPFATGPPTE CMRDENESPI PCFLAGDHRA NEQLGLTSMH TLWFREHNRV AAELLSLNPH  WDGDTIYHEA RKIVGAQVQH ITYQHWLPKV LGEVGMKMLG EYRGYEPGVN AGIFNAFATA AFRFGHTLVN PVLYRLDENF QPIAQGHIPL HKAFFSPFRI VNEGGIDPLL RGLFGVAGKM  RVPSQLLNTE LTERLFSMAH TVALDLAAIN IQRGRDHGIP PYHDYRVYCN LSSAHTFEDL KNEIKNPEIR EKLRRLYGSP LNIDLFPALM VEDLVPGSRL GPTLMCLLST QFKRLRDGDR  LWYENPGVFS PAQLTQIKQT SLARILCDNS DNITRVQRDV FRVAEFPHGY GSCDEIPRVD LRVWQDCCED CRTRGQFNAF SYHFRGRRSL EFSYEEDEPA KKAQPGKTLS VGKRSQRPSN 
TTSASYEHPQ APGTNEFKDF VLEMQRTITD LRAQIKKLES RLSTSVCTDA AGQTRTDGAQ WKQDACTACE CRDGQVTCFV EACAPAECPA PVRLDGACCP VCLRDTAGNK P 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 15, at least 22 introns, first exon is missing) and mRNA. Breed="thoroughbred"