View Redoxidase 5985

Entry information : Gint2CysPrx03_50803

Entry ID	5985
Creation	2007-11-22 (Christophe Dunand)
Last sequence changes	2012-05-30 (Christophe Dunand)
Sequence status	complete
Reviewer	Not yet reviewed
Last annotation changes	2012-05-30 (Christophe Dunand)

Peroxidase information: Gint2CysPrx03_50803

Name

Gint2CysPrx03_50803

Class

Typical 2-Cysteine peroxiredoxin [Orthogroup: 2CysPrx001]

Taxonomy

Eukaryota Hexamitidae Giardia

Organism

Giardia intestinalis (G. lamblia) [TaxId: 5741 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	Gint2CysPrx03_50803 start..stop	S start..stop
Gint2CysPrx01_50803	413	4.06e-150	1..201	1..201
Gint2CysPrx03_P15	412	1.24e-149	1..201	1..201
Gint2CysPrx01_P15	410	4.02e-149	1..201	1..201
Gint2CysPrx02_50803	367	2.72e-131	3..199	48..244

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '5985' 'join(34898..35503)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	34898..35503	604
join(34898..35503)

Literature and cross-references Gint2CysPrx03_50803

Literature	Morrison,H.G., McArthur,A.G., Gillin,F.D., Aley,S.B., Adam,R.D., Olsen,G.J., Best,A.A., Cande,W.Z., Chen,F., Cipriano,M.J., Davids,B.J., Dawson,S.C., Elmendorf,H.G., Hehl,A.B., Holder,M.E., Huse,S.M., Kim,U.U., Lasek-Nesselquist,E., Manning,G., Nigam,A., Nixon,J.E., Palm,D., Passamaneck,N.E., Prabhu,A., Reich,C.I., Reiner,D.S., Samuelson,J., Svard,S.G. and Sogin,M.L. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Science 317 (5846), 1921-1926 (2007).
DNA ref.	GenBank: AACB02000064.1 (34898..35503)
mRNA ref.	GenBank: XM_001704147.1

Protein sequence: Gint2CysPrx03_50803

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	201
PWM (Da):	22396.26
PI (pH):	5.69

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MPVPIPGTPC PDFEVDVVTP ELKFAKRKLS DYKGKYLIVF FYPLDFTFVC PSEIIHFSNL AEQLKKKCNA EIIIGSTDSV YSHYAWCLQG QNEGGIGTCK CDLFADTNHK MARDFGVLVE
DAGIALRGMF IVSDKGVVRH VTINDLPVGR SVEEAMRLVQ AFQYADKTGG DIPCGWTPEK NDTIIPDPEK KKEYFSKTFK E

Retrieve as FASTA

Remarks

Complete sequence from DNA (no intron) and mRNA. Strain="WB C6 / ATCC 50803"

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGCCCGTCC CCATCCCCGG CACGCCCTGC CCCGACTTCG AGGTCGACGT CGTCACCCCT GAGCTTAAGT TCGCCAAGCG TAAGCTCTCT GACTACAAGG GCAAGTACCT GATTGTCTTC TTCTATCCGC TCGACTTCAC CTTCGTCTGC CCCTCGGAGA TCATCCACTT CTCGAACCTG GCTGAGCAGC TGAAGAAGAA GTGCAACGCG GAGATCATCA TCGGCTCGAC GGACTCCGTC TACAGCCACT ACGCCTGGTG CCTCCAGGGC CAGAACGAGG GCGGCATCGG GACGTGCAAG TGCGACCTCT TCGCCGACAC GAACCACAAG ATGGCCCGCG ACTTCGGCGT TCTGGTCGAG GACGCCGGCA TTGCGCTCCG CGGGATGTTC ATCGTCTCTG ACAAGGGCGT CGTTCGCCAC GTCACGATCA ACGATCTTCC AGTGGGTCGC TCGGTGGAGG AGGCCATGCG CCTGGTCCAG GCCTTCCAGT ACGCTGATAA AACCGGCGGC GACATCCCGT GCGGCTGGAC CCCCGAGAAG AATGACACTA TCATCCCCGA CCCCGAGAAG AAGAAGGAGT ACTTCTCCAA GACGTTCAAA
GAGTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA