View Redoxidase 6

Entry information : GmPrx85 (GMIPER1 / Glyma15g13500.1)

Entry ID	6
Creation	2006-10-30 (Christophe Dunand)
Last sequence changes	2011-07-04 (Qiang Li)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2011-12-13 (Qiang Li)

Peroxidase information: GmPrx85 (GMIPER1 / Glyma15g13500.1)

Name (synonym)

GmPrx85 (GMIPER1 / Glyma15g13500.1)

Class

Class III peroxidase [Orthogroup: Prx048]

Taxonomy

Eukaryota Viridiplantae Streptophyta Fabaceae Glycine

Organism

Glycine max (soybean) [TaxId: 3847 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	GmPrx85 start..stop	S start..stop
GmPrx08	660	0	1..354	1..355
MtPrx10	582	0	1..354	1..353
MsPrx02	563	0	1..354	1..355
MtPrx11	561	0	1..354	1..355

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6' 'join(10109862..10110083,10111287..10111478,10111831..10111996,10112213..10112694)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	10109862..10110083	220	N° 2	10111287..10111478	190	N° 3	10111831..10111996	164	N° 4	10112213..10112694	480
join(10109862..10110083,10111287..10111478,10111831..10111996,10112213..10112694 )

Literature and cross-references GmPrx85 (GMIPER1 / Glyma15g13500.1)

Literature	Yi,S.Y. and Hwang, B.K. Molecular cloning and characterization of a new basic peroxidase cDNA from soybean hypocotyls infected with Phytophthora sojae f.sp.glycines Mol. Cells 8 (5), 556-564 (1998).
Protein ref.	UniProtKB: O23961
DNA ref.	Phytozome 12: Gm15 (10109862..10112694)

Protein sequence: GmPrx85 (GMIPER1 / Glyma15g13500.1)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	354 (327)
PWM (Da):	38547.72 (35625.1)	Transmb domain:	i3-25o
PI (pH):	7.1 (7.06)	Peptide Signal:	cut: 28 range:28-354

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MKSFHLTVTALCCVVVVLGVLPLSLDAQLDPSFYRDTCPRVHSIVREVVRNVSKKDPRMLASLIRLHFHDCFVQGCDASVLLNNTATIESEQQALPNNNSLRGLDVVNDIKTAVEKACPG
VVSCADILTLASEISSVLGGGPDWKVPLGRRDSLTANRNLANQNLPAPFFNLSRLKSAFAVQGLDTTDLVALSGAHTFGRAHCNFILDRLYNFSGTGKPDPTLDTTYLQQLRQICPNGGP
NNLVNFDPVTPDKIDRVYFSNLQVKKGLLQSDQELFSTPGADTIPIVNRFSSDQKVFFDAFEASMIKMGNIGVLTGKKGEIRKHCNFVNKKSVEVDIASVASEESSTEGMVTSI*

Retrieve as FASTA

Remarks

Complete sequence from genomic and 19 EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGAAGTCTTTCCATCTCACAGTGACAGCTTTGTGCTGTGTAGTGGTTGTGCTTGGAGTGCTTCCACTCTCCCTAGATGCACAACTAGATCCCTCCTTTTACAGAGACACTTGTCCCAGG
GTTCACTCCATTGTTCGTGAAGTCGTCAGGAACGTTTCAAAGAAAGATCCCCGTATGCTTGCTAGTCTCATTAGACTTCACTTTCATGACTGCTTTGTTCAAAAGTACGTTTACTCATCA
TCATTTTTAACTAAGTTTCAAGTGACTTCTTCACTTTTATTATTTCTTTTAAGTTTTATCTGCTAATCATATAATATGTATGTGTATTTGTCTATCCCTTGCAAGTAATTTTCAAGGGAA
TAAACAACAAAAATATCTATATCAATGGGTCATACATAACTAAATTTGACCGTGCACTTTAGCCACATGTCTTTGTTTTAGCAAGATATACGTGAAAATCATACACTATAAGATATCAGA
AAATACCACCATTTCCCTGATCTTAAAGGACAGGTCTTTTGGAGGCCTCCACTCACCACTTCTAATAAATAATAGTATTATGCATGATGCAATGCATGATGCATGGGACCACTTTCATTC
TCAACCATTGGTGCTTTGAAGGGTTTAATTTATGGAGGGAGTACTGGTGGGCTATGTTATATAACCTCCTTTTCCGTATGATTCAATCTCATCTCATTATGACCTCCTTTTTTTTCATGA
TTCTTAAGAATATTTATAACGTTTGATTCCCGGGCATTCATAGAGAGAAAAACAAAGATAAACGTAATAAGTGAAATGATAGGATTAAAAAAATAACATAAGAGAAGAATAAAGTATGAA
AAAGTGTCAGATGAGATTTTCATAATGGACAAGCTAGTTTCCAAAATTAAAAGCTCCAAATTTTTTCTTTTTTTACTTTTCCTCACTAATTTTATAATATTTTTTTTACAATATTTCTTT
CTCTGTCTTACTTCACTGTATCATTTATTTTATATTCCACTTTTCTTCTTTTCGATCCATATTGTGAAAATTATTAAGAATTACATCACTTATTCTTTACCTATATATTATTTTGAACCC
TCTGTCATTGTTTTGTTTTTTTTTTTGTTTGAATAAATATAGTTAAAGAAAAAAGAGTGATGTACTATCAGTGTAAAAAGTCTTCAAGTAATTAAAGCAGTAATTTATGGTTGAATAATA
TATAAATATTAAACTCATAGTTGAAAATTAAAATAGTAAAATTCAATTATCTTCACGTCAAGGAATGTCATCTTCTGTGAGAACATGTTCCCTTTTTCAATCACTCTAAAATCTGATCAA
TCAGAAGTTGATTTACCAATTGATGTCGATCGATCATATATGTAGTTGTTGAGAATGAACAAGAAATATGAATTGATTATGTTATTGATTTTTGTGGCATGCTACAGGGATGTGATGCAT
CAGTTTTGTTGAACAACACTGCCACCATAGAGAGCGAGCAACAAGCTCTGCCAAACAACAACTCACTAAGAGGTTTGGATGTTGTGAACGACATTAAGACAGCAGTGGAAAAGGCTTGTC
CCGGCGTGGTTTCTTGTGCTGATATTCTTACCCTTGCATCCGAAATATCTTCTGTTCTGTGGTATAAATTAATGCTATCTCTTATTCATTTTGCTTCTGTGCTGAGAATAAAATCACATT
ATATATATGTTTCAATGTTTGACAAATATTTAATTTCGAGAGTAGAGTTTAGATAGAATCATTATCATAAAGTATACTAACCAAAAGGTTGCAATCAATTAGAAATGATATGTCTAAGGT
GGTTTCTGAGTTACTCCTTCTAATCATATTTAAATGCCATCATGATCTTTTTCTAACATTGATTATTACATAGCTCAAAGTCTATATTATTATTAGTCATGTTCAATTAAGAACACCTTT
TACTTTATTGGTCTTAAAATGATACTATATCTTACAAGTATGTATTAATATAGGGTGGTGGTCCTGATTGGAAAGTTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACCGAAACCTTG
CAAATCAAAACCTTCCAGCTCCATTCTTCAACCTATCTCGACTTAAATCTGCCTTTGCTGTTCAAGGTCTTGACACCACTGATCTAGTTGCACTCTCAGAGGTAAGAATTTTTTTCCCAA
TTAAATTCATCCTATATGTTGCAACAATTAAAATAATAAGAATAATAAATAAGGAATTTCTTGAAATTCAGGGTAAGGTAATATATTAGATTCAAAGGGATATATTATTAATGAAACCAT
AAATTAACATTACTCTAGGAAAAAGAAAGTCCATGATGGATTGATTAGTATATGATTCACACAAGATTCAATTTCAGGTGCTCATACATTCGGCAGAGCTCACTGCAATTTCATTCTTGA
CCGATTGTACAATTTCAGTGGAACTGGCAAACCTGATCCAACTCTTGACACAACTTACTTACAACAATTGCGCCAAATATGCCCCAATGGTGGACCTAACAACCTTGTCAATTTTGACCC
TGTCACTCCTGATAAAATTGACAGGGTCTACTTCTCCAATCTTCAGGTTAAGAAGGGCTTGCTTCAGAGTGATCAAGAGCTGTTCTCGACACCTGGTGCCGATACCATCCCCATTGTCAA
CAGGTTCAGCAGTGACCAGAAAGTTTTCTTTGACGCCTTTGAGGCTTCAATGATTAAGATGGGTAACATTGGTGTGCTCACTGGGAAGAAAGGAGAAATCAGAAAACATTGTAACTTTGT
TAACAAGAAATCTGTTGAAGTTGATATTGCTAGTGTGGCCTCAGAAGAATCATCAACAGAGGGTATGGTTACCTCAATC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA