Entry information : PpaRboh03-1
Entry ID 6087
Creation 2008-01-29 (Christophe Dunand)
Last sequence changes 2008-01-29 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2012-04-19 (Catherine Mathe)
Peroxidase information: PpaRboh03-1
Name PpaRboh03-1
Class Respiratory burst oxidase homolog    [Orthogroup: Rboh005]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaRboh03-1
start..stop
S start..stop
PpaRboh03-3 1300 0 2..775 119..886
PpaRboh03-2 1188 0 1..775 45..827
PpaRboh03-4 1161 0 1..775 34..800
MpRboh02 1037 0 5..775 221..1023
Gene structure Fichier Exons


exon

Literature and cross-references PpaRboh03-1
Literature Rensing,S., et al., The genome of the moss Physcomitrella patens reveals evolutionary insights into the conquest of land by plants. Science (2008) In press
DNA ref. Phytozome 12:   scaffold_32 (364491..367986)
Cluster/Prediction ref. UniGene:   Ppa.5533 [3' end]
Protein sequence: PpaRboh03-1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   775 (371)
PWM (Da):   %s   88250.46 (40236.1) Transmb domain:   %s   o220-239i356-378o393-415i420-442o
PI (pH):   %s   9.38 (4.97) Peptide Signal:   %s   cut: 35 range:35-405
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MQKSTSSRAEYAIKGLRYINKATATADQKKSWEQVEARFHKLANL
ENMLHRSDFAECI
GMKDSKEFANELFDALVRRQGVEVESIGKDELYLHWLQIADKSFDARMQLFFDLCDKDLDGRITGEEVKQLIMLSASANKLSKLKDQAAEYAALIMEGLHVDGAEYILSQLKTLMSGSVQ
GFGRETTVNNNQTLTPKSKRSRMMGVAEKSAYFLLDNCKRIWILALWISVMVGLFAWKFLQYRNRSAWWVMGDCLCVAKGAAETLKLNMALILLPVCRNTITRLRSTRLRRIIPFDDNLD
FHK
IVAGGIAAGVILHATCHITCDIPRFVEADKEKFFKYLGDDFDFQPTYSDILRMSVGYSGLIMVVLMILAFLLATHWFRQSLVKLPWPFHRLTGFNAFWYSHHLFAIVYAFLLLHGSK
LLLPNSILERSTWIYIAVPLVLYAGERFLRMYRTNSSKVDVIK
AAIYTGNVLAIHMSKPEGFKYKSGMYLFLQCPEISSFEWHPFSITSAPEDPFLSVHIRTLGDWTAELKRIFSDACGG
RMRLQTVNNYGLSGELTLAA
RFPKLYIDGPYGAPAQDYLNYDVLLLVGLGIGATPFISILKDLLHHTINESLGHSDSLTPDLRPMESPRTRSKKKAKRNPKAYFYWMTREQGSFDWFRGV
MREVEEIDHK
GSIEMHNYLTSVYEEGDARSTLVIMLQALHHAKNGVDLVSGTRARTHFARPNWKSVFSKLAATHQEKRIGVFYCGPVTLANELENLSRTYTQKSSTKFSFHKENF

Retrieve as FASTA  
Remarks Complete sequence from genomic (10 introns), and 4 ESTs.
DNA
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CDS
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