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Entry information : SmPrx23-2_30 (SmPrx23b_30)
Entry ID 6204
Creation 2008-06-30 (Christophe Dunand)
Last sequence changes 2011-01-25 (Toky Ramarohetra (Scipio))
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-02-01 (Christophe Dunand)
Peroxidase information: SmPrx23-2_30 (SmPrx23b_30)
Name (synonym) SmPrx23-2_30 (SmPrx23b_30)
Class Class III peroxidase    [Orthogroup: Prx230]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx23-2_30
start..stop		 S start..stop
SmPrx23-1_79 681 0 1..328 1..328
KfedPrx64 365 4.87e-127 13..328 10..323
KfedPrx11 362 7.98e-126 13..328 10..323
KfedPrx65 360 2.12e-125 15..328 1..312
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6204' 'join(555481..555714,555797..555985,556057..556222,556310..556707)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 555481..555714 232 N° 2 555797..555985 187 N° 3 556057..556222 164 N° 4 556310..556707 396
join(555481..555714,555797..555985,556057..556222,556310..556707)


exon

Literature and cross-references SmPrx23-2_30 (SmPrx23b_30)
Literature JGI
DNA ref. Phytozome 12:   scaffold_30 (555481..556707)
mRNA ref. JGI transcript:   235209
Protein sequence: SmPrx23-2_30 (SmPrx23b_30)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (304)
PWM (Da):   %s   36149.74 (33509.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.21 (9.21) Peptide Signal:   %s   cut: 25 range:25-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEANFPRLGFIAILLLALVWISTAYQSYHPLKMGYYKCTRKCVNA
EAIVKKIVRQYVKRDPTLAASLLRMHFHDCFVMGCDASILLNSTKTSIAERDALPNLSLRGFEVINAAKAALEAACPKTVSCADILSLAARDSVETIYGPSWDVPTGRRDGIISNASDVLLNLPPFFANFTTLKSIFAAKGLNVIDLVALSGG
HTIGFSHCAAFDARLYNFTGKGDADPSLDPAYAAHLRTKCKHGDLVTKVPLDDTLTGFDTNYYKFIMQNKGLLQSDAALLETRRSRFLVEQSTKPSIFRPQFARSMTKMGRIEVLVEKQG
QIRSRCEFVN

Retrieve as FASTA  
Remarks Warnings: Equal sequence : 6204;7010.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGGCAAACTTCCCAAGGCTTGGATTCATTGCAATACTGCTGCTTGCACTGGTTTGGATTTCAACTGCTTATCAATCATATCATCCTCTCAAGATGGGATACTACAAATGCACAAGA
AAATGTGTCAATGCGGAGGCGATTGTCAAGAAGATTGTGAGGCAATATGTTAAAAGGGATCCAACGCTGGCTGCATCACTCTTGAGAATGCACTTCCATGATTGTTTCGTAATGTGGTGA
GTTAACAAAGATTAACAACTTAGTGATTTAGATTCTCTTCCCATGGTTATAACTCAACTCTTTTGATGATTTATACAGGGATGCGATGCCTCTATTCTACTAAACTCTACCAAGACAAGC
ATTGCCGAGAGAGACGCACTCCCAAACTTGTCACTCAGAGGTTTCGAAGTGATCAATGCTGCAAAGGCTGCACTTGAAGCAGCGTGCCCCAAAACAGTATCTTGTGCTGATATTCTCTCC
CTCGCGGCTAGAGATTCAGTAGAAACGCGGTACAGAAGTTTTTTATTTCTTATCTATCTCTCATAGTTTTCTAATAAACTTTTTTGATCCAATCACACAGATCTATGGACCTTCTTGGGA
CGTTCCAACTGGCCGGAGAGATGGTATTATCTCCAATGCTTCAGACGTTCTCCTAAATCTTCCACCCTTCTTTGCCAATTTCACAACTCTCAAGTCCATCTTTGCTGCAAAAGGGTTGAA
TGTAATTGACCTTGTGGCACTCTCAGAGGTAAGATAAATCTCACCTTCACCAACTTTTCGTTTACATTAGCATCTATACACACCTACACTTCTTAATTCCTCGTTTGACTTGCAGGTGGA
CACACTATTGGCTTTTCTCACTGTGCTGCTTTTGATGCCCGGCTCTACAATTTCACTGGGAAAGGTGATGCAGATCCATCTCTAGATCCTGCCTATGCAGCCCACCTTAGAACCAAGTGC
AAGCATGGAGATCTTGTCACCAAGGTTCCCCTGGATGACACTCTCACAGGATTTGATACGAACTACTACAAGTTTATCATGCAAAACAAGGGGTTGCTCCAGTCCGATGCTGCACTCCTA
GAGACTCGAAGGTCGAGATTCCTGGTGGAGCAATCTACCAAGCCTTCGATCTTCAGGCCCCAGTTTGCACGATCCATGACTAAGATGGGGCGGATTGAGGTGCTCGTTGAAAAGCAGGGA
CAGATCCGCAGTCGGTGTGAGTTTGTCAATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGGCAAACTTCCCAAGGCTTGGATTCATTGCAATACTGCTGCTTGCACTGGTTTGGATTTCAACTGCTTATCAATCATATCATCCTCTCAAGATGGGATACTACAAATGCACAAGA
AAATGTGTCAATGCGGAGGCGATTGTCAAGAAGATTGTGAGGCAATATGTTAAAAGGGATCCAACGCTGGCTGCATCACTCTTGAGAATGCACTTCCATGATTGTTTCGTAATGGGATGC
GATGCCTCTATTCTACTAAACTCTACCAAGACAAGCATTGCCGAGAGAGACGCACTCCCAAACTTGTCACTCAGAGGTTTCGAAGTGATCAATGCTGCAAAGGCTGCACTTGAAGCAGCG
TGCCCCAAAACAGTATCTTGTGCTGATATTCTCTCCCTCGCGGCTAGAGATTCAGTAGAAACGATCTATGGACCTTCTTGGGACGTTCCAACTGGCCGGAGAGATGGTATTATCTCCAAT
GCTTCAGACGTTCTCCTAAATCTTCCACCCTTCTTTGCCAATTTCACAACTCTCAAGTCCATCTTTGCTGCAAAAGGGTTGAATGTAATTGACCTTGTGGCACTCTCAGGTGGACACACT
ATTGGCTTTTCTCACTGTGCTGCTTTTGATGCCCGGCTCTACAATTTCACTGGGAAAGGTGATGCAGATCCATCTCTAGATCCTGCCTATGCAGCCCACCTTAGAACCAAGTGCAAGCAT
GGAGATCTTGTCACCAAGGTTCCCCTGGATGACACTCTCACAGGATTTGATACGAACTACTACAAGTTTATCATGCAAAACAAGGGGTTGCTCCAGTCCGATGCTGCACTCCTAGAGACT
CGAAGGTCGAGATTCCTGGTGGAGCAATCTACCAAGCCTTCGATCTTCAGGCCCCAGTTTGCACGATCCATGACTAAGATGGGGCGGATTGAGGTGCTCGTTGAAAAGCAGGGACAGATC
CGCAGTCGGTGTGAGTTTGTCAATTGA

Retrieve as FASTA