1. Browse the Database
  2. View Redoxidase
Entry information : SmPrx23-1_79 (SmPrx23a_79)
Entry ID 7957
Creation 2011-02-01 (Christophe Dunand)
Last sequence changes 2011-02-01 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-01 (Christophe Dunand)
Peroxidase information: SmPrx23-1_79 (SmPrx23a_79)
Name (synonym) SmPrx23-1_79 (SmPrx23a_79)
Class Class III peroxidase    [Orthogroup: Prx230]
Taxonomy Eukaryota Viridiplantae Streptophyta Isoetopsida Selaginellaceae Selaginella
Organism Selaginella moellendorffii    [TaxId: 88036 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SmPrx23-1_79
start..stop		 S start..stop
SmPrx23-2_30 681 0 1..328 1..328
KfedPrx64 365 4.87e-127 13..328 10..323
KfedPrx11 362 7.98e-126 13..328 10..323
KfedPrx65 360 2.12e-125 15..328 1..312
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7957' 'join(571667..571900,571983..572171,572243..572408,572496..572893)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 571667..571900 232 N° 2 571983..572171 187 N° 3 572243..572408 164 N° 4 572496..572893 396
join(571667..571900,571983..572171,572243..572408,572496..572893)


exon

Literature and cross-references SmPrx23-1_79 (SmPrx23a_79)
DNA ref. Phytozome 12:   scaffold_79 (571667..572893)
Protein sequence: SmPrx23-1_79 (SmPrx23a_79)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (304)
PWM (Da):   %s   36149.74 (33509.3) Transmb domain:   %s   i7-29o
PI (pH):   %s   9.21 (9.21) Peptide Signal:   %s   cut: 25 range:25-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MEANFPRLGFIAILLLALVWISTAYQSYHPLKMGYYKCTRKCVNA
EAIVKKIVRQYVKRDPTLAASLLRMHFHDCFVMGCDASILLNSTKTSIAERDALPNLSLRGFEVINAAKAALEAACPKTVSCADILSLAARDSVETIYGPSWDVPTGRRDGIISNASDVLLNLPPFFANFTTLKSIFAAKGLNVIDLVALSGG
HTIGFSHCAAFDARLYNFTGKGDADPSLDPAYAAHLRTKCKHGDLVTKVPLDDTLTGFDTNYYKFIMQNKGLLQSDAALLETRRSRFLVEQSTKPSIFRPQFARSMTKMGRIEVLVEKQG
QIRSRCEFVN

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGGCAAACTTCCCAAGGCTTGGATTCATTGCAATACTGCTGCTTGCACTGGTTTGGATTTCAACTGCTTATCAATCATATCATCCTCTCAAGATGGGATACTACAAATGCACAAGA
AAATGTGTCAATGCGGAGGCGATTGTCAAGAAGATTGTGAGGCAATATGTTAAAAGGGATCCAACGCTGGCTGCATCACTCTTGAGAATGCACTTCCATGATTGTTTCGTAATGTGGTGA
GTTAACAAAGATTAACAACTTAGTGATTTAGATTCTCTTCCCATGGTTATAACTCAACTCTTTTGATGATTTATGCAGGGATGCGATGCCTCTATTCTACTAAACTCTACCAAGACAAGC
ATTGCCGAGAGAGACGCACTCCCAAACTTGTCACTCAGAGGTTTCGAAGTGATCAATGCTGCAAAGGCTGCACTTGAAGCAGCGTGCCCCAAAACAGTATCTTGTGCTGATATTCTCTCC
CTCGCGGCTAGAGATTCAGTAGAAACGCGGTACAGAAGCTTTTTATTTCTTATCTATCTCTCATAGTTTTCTAATAAACTTTTTTGATCCAATCACACAGATCTATGGACCTTCTTGGGA
CGTTCCAACTGGCCGGAGAGATGGTATTATCTCCAATGCTTCAGACGTTCTCCTAAATCTTCCACCCTTCTTTGCCAATTTCACAACTCTCAAGTCCATCTTTGCTGCAAAAGGGTTGAA
TGTAATTGACCTTGTGGCACTCTCAGAGGTAAGATAAATCTCACCTTCACCAACTTTTCGTTTACATTAGCATCTATACACACCTACACTTCTTAATTCCTCGTTTGACTTGCAGGTGGA
CACACTATTGGCTTTTCTCACTGTGCTGCTTTTGATGCCCGGCTCTACAATTTCACTGGGAAAGGTGATGCAGATCCATCTCTAGATCCTGCCTATGCAGCCCACCTTAGAACCAAGTGC
AAGCATGGAGATCTTGTCACCAAGGTTCCCCTGGATGACACTCTCACAGGATTTGATACGAACTACTACAAGTTTATCATGCAAAACAAGGGGTTGCTCCAGTCCGATGCTGCACTCCTA
GAGACTCGAAGGTCGAGATTCCTGGTGGAGCAATCTACCAAGCCTTCGATCTTCAGGCCCCAGTTTGCACGATCCATGACTAAGATGGGGCGGATTGAGGTGCTCGTTGAAAAGCAGGGA
CAGATCCGCAGTCGGTGTGAGTTTGTCAATTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGAGGCAAACTTCCCAAGGCTTGGATTCATTGCAATACTGCTGCTTGCACTGGTTTGGATTTCAACTGCTTATCAATCATATCATCCTCTCAAGATGGGATACTACAAATGCACAAGA
AAATGTGTCAATGCGGAGGCGATTGTCAAGAAGATTGTGAGGCAATATGTTAAAAGGGATCCAACGCTGGCTGCATCACTCTTGAGAATGCACTTCCATGATTGTTTCGTAATGGGATGC
GATGCCTCTATTCTACTAAACTCTACCAAGACAAGCATTGCCGAGAGAGACGCACTCCCAAACTTGTCACTCAGAGGTTTCGAAGTGATCAATGCTGCAAAGGCTGCACTTGAAGCAGCG
TGCCCCAAAACAGTATCTTGTGCTGATATTCTCTCCCTCGCGGCTAGAGATTCAGTAGAAACGATCTATGGACCTTCTTGGGACGTTCCAACTGGCCGGAGAGATGGTATTATCTCCAAT
GCTTCAGACGTTCTCCTAAATCTTCCACCCTTCTTTGCCAATTTCACAACTCTCAAGTCCATCTTTGCTGCAAAAGGGTTGAATGTAATTGACCTTGTGGCACTCTCAGGTGGACACACT
ATTGGCTTTTCTCACTGTGCTGCTTTTGATGCCCGGCTCTACAATTTCACTGGGAAAGGTGATGCAGATCCATCTCTAGATCCTGCCTATGCAGCCCACCTTAGAACCAAGTGCAAGCAT
GGAGATCTTGTCACCAAGGTTCCCCTGGATGACACTCTCACAGGATTTGATACGAACTACTACAAGTTTATCATGCAAAACAAGGGGTTGCTCCAGTCCGATGCTGCACTCCTAGAGACT
CGAAGGTCGAGATTCCTGGTGGAGCAATCTACCAAGCCTTCGATCTTCAGGCCCCAGTTTGCACGATCCATGACTAAGATGGGGCGGATTGAGGTGCTCGTTGAAAAGCAGGGACAGATC
CGCAGTCGGTGTGAGTTTGTCAATTGA

Retrieve as FASTA