Entry information : PviPrx01(Pavir.1KG293200)
Entry ID 6469
Creation 2009-01-12 (Christophe Dunand)
Last sequence changes 2009-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2019-10-09 (Christophe Dunand)
Peroxidase information: PviPrx01(Pavir.1KG293200)
Name PviPrx01(Pavir.1KG293200)
Class Class III peroxidase    [Orthogroup: Prx075]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Panicum
Organism Panicum virgatum    [TaxId: 38727 ]
Cellular localisation N/D
Tissue type Callus
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PviPrx01
start..stop
S start..stop
SiPrx73 580 0 1..344 1..341
ZmPrx96 555 0 1..343 1..342
SbPrx79 536 0 20..341 22..347
TaPrx57-1D 399 9.81e-140 1..344 1..339
Literature and cross-references PviPrx01(Pavir.1KG293200)
Literature Lucas,S., Rokhsar,D., Wang,M., Lindquist,E.A., Tobias,C.M., Twigg ,P., Sarath,G., Anderson,O. and Vogel,K. DOE Joint Genome Institute Panicum virgatum EST project.
EST ref. GenBank:   FE615299.1 [5' end]  FE615300.1 [3' end]
Protein sequence: PviPrx01(Pavir.1KG293200)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   344 (318)
PWM (Da):   %s   36743.53 (34074.1)  
PI (pH):   %s   6.14 (5.75) Peptide Signal:   %s   cut: 27 range:27-344
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MARLNAAALP LCVALLALCL AGQSAAGRYY SDKVQDKVRK EVEKAMAYNP SVGPALVRLV FHDCWVNGCD GSVLLDKTPT DGTNTEKKAV NNIGLAGFEV IDTIKQKVGA DASCADILAF  AGRDAADILS GGKIFYTIPG GRKDGVVSSA AAADANLPES TFDFDQLQTN FAATARNFTV EELVVLSGAH SIGVAHLSSY KDRLGGADAT PIDSDYQSAL TKATPPELLG KGQNPTLPNN 
PRDATAAFQK DAAYDPAAVG VSPTRGVLDN SYYHNNLINK VLFKSDWVLR TDSFAAGKLQ EYKDNAAEWN SDFAAAMVKL SSLPAQGRNL EIRKNCRFTN QQYY* 

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron 1) and 3 ESTs. Cultivar="Kanlow".
DNA
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CDS
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