Entry information : LePrx54 (Solyc11g072920.1.1[2.3])
Entry ID 652
Creation 2005-09-15 (Christophe Dunand)
Last sequence changes 2014-08-27 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-10-06 (Achraf Jemmat)
Peroxidase information: LePrx54 (Solyc11g072920.1.1[2.3])
Name (synonym) LePrx54 (Solyc11g072920.1.1[2.3])
Class Class III peroxidase    [Orthogroup: Prx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue types Callus
Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LePrx54
start..stop
S start..stop
NtPrx04-1A 581 0 1..321 1..323
NtPrx04-1B 580 0 1..327 1..330
PpePrx07 508 0 19..327 22..331
IaquPrx52 507 0 19..327 17..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '652' 'complement(join(53159700..53160106,53160197..53160362,53160522..53160719,53160813..53161025))' Exons


exon

Literature and cross-references LePrx54 (Solyc11g072920.1.1[2.3])
Literature Alcala,J. et al., unpublished
EST ref. GenBank:   AW216691 [3' end]
Cluster/Prediction ref. UniGene:   Les.24835 [5' end]
Protein sequence: LePrx54 (Solyc11g072920.1.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (303)
PWM (Da):   %s   34814.03 (32024.7)  
PI (pH):   %s   4.65 (4.76) Peptide Signal:   %s   cut: 25 range:25-327
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSPNYILVVICILLSTCSFYETNAQLSANFYSTTCPNVSSIVQNVIQQALQSDARIGASLIRLHFHDCFVNGCDASLLLDNNATTNIVSEKDAAPNTNSTRGFDVVDNIKTALESSCPGV
VSCADILALAAESSVSLAGGPSWNVLLGRRDSRTANQAGANTSIPSPTEGLTNITAKFTAVGLNLTDLVALSGAHTFGRAQCRVFSARLYNFNGTGNPDPSLNTTYLSNLRQICPQNGSA
TALANLDPTTSDGFDNNYFANLQNNQGLLQSDQELFSSATTLSIVNTFSSNQNTFFQSFVQSMINMGNISPLTGTNGEIHLDCKRIN*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 11, 3 introns) and 5 ESTs.
Promoter
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Send to cis Analysis
DNA
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CDS
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