View Redoxidase 6641

Entry information : LbiLDS01

Entry ID	6641
Creation	2009-03-29 (Christophe Dunand)
Last sequence changes	2009-03-29 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2015-12-11 (Catherine Mathe)

Peroxidase information: LbiLDS01

Name

LbiLDS01

Class

Linoleate diol synthase (PGHS like) [Orthogroup: LDS001]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Tricholomataceae Laccaria

Organism

Laccaria bicolor [TaxId: 29883 ]

Cellular localisation

N/D

Tissue types

Mycelium
Vegetative mycelia

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	LbiLDS01 start..stop	S start..stop
CcinLDS01	1157	0	6..1073	4..1089
JargLDS01	1086	0	1..1071	1..1068
AbLDS01_burnettii	1072	0	9..1070	10..1082
AbLDS01_bisporus	1056	0	9..1070	10..1082

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6641' 'join(110616..110786,110834..110896,110947..111028,111088..111647,111697..111915,111965..112129,112180..112259,112312..112480,112537..112570,112624..112667,112718..112765,112815..112953,113008..113336,113507..113725,113750..113811,113911..114031,114090..114387,114440..114558,114614..114699,114754..114781,114836..114915,114966..115056,115111..115125)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	110616..110786	169	N° 2	110834..110896	61	N° 3	110947..111028	80	N° 4	111088..111647	558
N° 5	111697..111915	217	N° 6	111965..112129	163	N° 7	112180..112259	78	N° 8	112312..112480	167
N° 9	112537..112570	32	N° 10	112624..112667	42	N° 11	112718..112765	46	N° 12	112815..112953	137
N° 13	113008..113336	327	N° 14	113507..113725	217	N° 15	113750..113811	60	N° 16	113911..114031	119
N° 17	114090..114387	296	N° 18	114440..114558	117	N° 19	114614..114699	84	N° 20	114754..114781	26
N° 21	114836..114915	78	N° 22	114966..115056	89	N° 23	115111..115125	13
join(110616..110786,110834..110896,110947..111028,111088..111647,111697..111915, 111965..112129,112180..112259,112312..112480,112537..112570,112624..112667,11271 8..112765,112815..112953,113008..113336,113507..113725,113750..113811,113911..11 4031,114090..114387,114440..114558,114614..114699,114754..114781,114836..114915, 114966..115056,115111..115125)

Literature and cross-references LbiLDS01

Literature	Peter,M., Deveau,A., Delaruelle,C., Kohler,A., Frey-Klett,P. and Martin,F.M. Analysis of expressed sequence tags of Laccaria bicolor S238N.
DNA ref.	JGI genome: scaffold_20 (110616..115125)
EST ref.	GenBank: EL739402 [3' end]

Protein sequence: LbiLDS01

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	1073 (114)
PWM (Da):	120076.83 (12576.3)
PI (pH):	6.72 (6.75)	Peptide Signal:	cut: 25 range:25-138

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MSLRYIRDRIVKRVDFIAESRAPLDTDGAHPQSHVFEKTVTEIHE
LLVKPAFQVSDLGAYWDAIQNLSTVGLNDRDLLLEKVLVLMSRLQHTKISLKVQQFVINLLYKDLPHPPSGYLGLSPSSTLCHHHKTLEDASTHALVKYAYRAADGSNYNPLFPTLGKAGSPYARSVPSANI
VPSSALPDPELVFDTLLRRQKFVPHPGGISSLFFAFADLVIHSIFNTNHFDWSINDASSYLDLSVLYGSSESQVNSVRRRDGTGKLFDDVFADSRLLFMPPASCALLVLLNRNHYIAEKI
LNINENGNLSSPPPEDEKLRLAQDDEIFHRARLVNCGYFMHIILGDYVGAILGLVRDESDWRLDPLMTMREISHEFVPQGEGNVVSIEFNLLYRWHATLSAQDEKWTEGEFNKLFKGKNP
NDVTIEDFKNAAHEFMLPPKDPRVWTFKDLKRDDKGRFNDADLAQILQDATEWRAGAYGARGTPEVLRVIEIMGMKQARSWGTCLNEFRKFLGLRPYETFAEWNPDREITAAAALYRDID
NLELHVGLQAEQTKKPGPGAGLCPGYTISRSILADAVCLTRGDRFLTVDFNPFNLTSWGYQDCQYDKKDGSYGGLLTKLLFRTLPEHYQRGSAYAHFPFLDPVFMREENLAKTNPSLVDK
YIWTRPRQDSPTVPFDTLESVKKVLKDPHFVSAYDHRLYNVPEAIRHLHEGVSQVSSLIHGESTADWVAFFSKATEDLIKAKAFEPVSKGVKYVDIVKDVINILPIHWISHSILDLIGIC
SGWPTPEDERESRRYVYLNFDPVNDWHLRESSQRYSAEILDIIHAHIEKLTGILSIPDALNHLSIGASNKSHDFLKKVIDANGKNNTRHELAAQVFSATIPTAPLYSQAIAKVVDFYLAR
EQAVARQEIVNLANSKDKDAPSKILAYVREALRLNPTVAGVYRTAAQDVLVGSKRVNATEHAFASIVKANLPEVFGPHPSVASYSRPADKAGITTIGDFGLLSPVFFDTAPVILGKILSL
KNLKPAPGKSGTLLSFKENWNGTPSTQYINTEGIVGPFPDSLLVFTPA*

Retrieve as FASTA

Remarks

Complete sequence from genomic (20 introns) and 3 ESTs (EL739402, EX787091 and EX787090). Strain="S238N-H82".

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCCCTTCGGTATATTCGTGACCGGATCGTCAAGCGCGTTGACTTCATCGCCGAAAGTCGCGCTCCCCTCGACACTGATGGCGCGCATCCGCAAAGCCACGTTTTTGAAAAGACGGTG
ACAGAGATACACGAACTCCTCGTCAAACCCGCTTTTCAAGTTTCAGATCTATAGTGAGCCGTTAGCTTCTAGTCATTAACATTCGTCTAACGTTCGTCAGGGCGCGTACTGGGATGCGAT
TCAAAATCTGAGCACTGTTGGCCTCAACGACCGGGACTTGCTGTGGTGTGTAACCCATGCTCCTCGTCGATGAAAAAATTCTCACCATTGAGCAGCTTGAAAAAGTTCTCGTGTTGATGT
CGAGACTTCAACACACCAAAATATCGCTGAAGGTCCAACAGTTCGTCATAAACCTCCCCGTAAGCAGCGGCCTTCCTCTTTCGTCGGAGCGGAAGCTAATCTCTGATCGACTTGACAGTT
TACAAGGATCTGCCCCACCCACCAAGCGGCTATTTGGGCCTTTCTCCGTCATCTACCCTTTGCCATCACCACAAGACATTAGAAGACGCCTCCACACATGCCCTTGTGAAATATGCTTAT
CGCGCTGCTGATGGATCAAACTACAATCCCCTCTTCCCCACACTCGGCAAAGCAGGGTCACCTTACGCCCGTTCCGTACCCTCCGCAAACATCGTGCCGAGTTCCGCCCTCCCTGATCCT
GAACTGGTCTTCGATACCCTCCTTCGACGCCAAAAGTTCGTCCCACACCCCGGAGGCATTTCTTCCCTATTCTTCGCGTTCGCGGATCTGGTGATCCACAGCATCTTCAACACCAACCAC
TTCGACTGGTCGATCAACGACGCAAGCAGTTACCTCGATCTTAGCGTACTCTACGGTAGCTCCGAGTCGCAAGTCAATTCAGTCAGGAGGAGAGATGGAACTGGAAAATTGTTCGATGAT
GTTTTCGCGGATAGTCGTTTGCTATTCATGCCCCCAGCAAGCTGTGCGCTGTTGGTTTTGCTCAACAGGAATCATAATATGTCTGTTCATCTTTGTTTCCACTGTTTATCTTCGCTGACG
TTCTCCAAGTACATTGCGGAGAAAATCTTGAATATCAATGAAAACGGCAATCTCAGCTCGCCGCCTCCCGAAGACGAAAAGTTACGGCTGGCGCAAGATGACGAAATCTTTCATCGAGCC
CGCCTCGTAAATTGTGGATATTTCATGCATATCATTCTCGGAGATTATGTAGGCGCAATCTTGGGGCTCGTCCGTGATGAATCCGACTGGCGTCTCGATCCCCTCATGTGGTAAGTCCAC
CGATATATCGTGTGCAACTTGCGCTAACCACTCCCCTAGACGATGCGTGAAATCAGTCACGAATTTGTCCCACAGGGTGAAGGCAACGTGGTTTCCATAGAGTTCAACCTCCTCTATAGG
TGGCATGCAACGCTGTCTGCACAGGACGAGAAATGGACGGAAGGAGAGTTCAACAAGCTCTTCAAGGGCAAAAATCCCAACGACACGTAGGTCTTTTGTTTATTTTGATCAGTGAGTGTC
AATAACATTATTCTAGGTTACCATTGAAGATTTCAAAAACGCGGCCCATGAATTTATGTTACCCCCGAAGGACCCCAGAGTCTGGACTTTCAAAGAGAGTATGTAACTTGCCCGTTGATC
TTCAGCTTCTTTCAACAATTTTTATTTCAGTTTGAAGCGGGATGACAAGGGCCGTTTCAACGATGCCGACCTTGCACAGATTTTGCAAGATGCTACAGAATGGCGCGCAGGAGCATATGG
AGCGCGAGGAACTCCTGAAGTTCTCAGAGTGATTGAGATTATGGGGATGAAACAGGCGAGGTCTTGGGGAACTTGTTCGCGGTATGTTGTGTTTATGAAGTTGTTGAGAGAAAGCTGACG
TTGCTATCTCGTTCTAGCTTAACGAGTTCAGGAAGTTTTTGGGGCTCAGGCGCGTCAGTCTGCTCCTCGTTCTTGGTATCTCTCCAAGCTGACTTGCCAATTTCAGCATACGAGACATTT
GCAGAGTGGAATCCAGATCGTGAAATCCATATGTAGGAGTGGTTTCTTCTCAGCTCCTCGCCGCATCTAACGTTGTTATCAGACCGCAGCGGCTGCATTGTACAGAGACATTGACAACTT
GGAGCTCCACACGTTAGTATCGTCGATTTTCCTTGCCATATCACTCAACTCTCTATTCTAGGTCGGTCTGCAAGCAGAGCAAACTAAAAAGCCCGGGCCAGGAGCTGGCTTGTGCCCTGG
TTACACCATCTCACGCTCCATTCTTGCTGATGCAGTTTGCCTCACTCGAGGAGATCGTTTCTTGACTGTGGACTTCAATCTCGTACGTTTCTCCCCCTTTTCAATACCAGTTTGATGTTG
ACCCTTGTTCGTGAAGCCTTCAATCTTACCTCTTGGGGATATCAAGACTGTCAATACGACAAGAAAGACGGTTCATACGGCGGTTTACTTACGAAGTTGCTTTTCCGCACATTGCCGGAG
CACTACCAACGGGGATCAGCATACGCCCACTTCCCTTTCTTGGACCCCGTATTCATGAGAGAAGAAAACTTGGCGAAGACAAACCCATCTCTAGTCGACAAGTACATCTGGACTCGGCCG
CGCCAGGATTCACCCACCGTTCCTTTCGACACTCTTGAGAGTGTCAAGAAAGTTCTAAAGGACCCTCACTTTGTGTCTGCCTACGACCATCGACTTTATAACGTATAGTGAAACCTTTCC
TGCCAAAGAAACGCCCATCAGCATTCACGACCGTGTCGAAGAGATTGGTACGACATCTACCCGTTGCCCATGACCATTTTGATTATGTATTTATTATCAGAGCATTATCAAGAAGTCGAC
TCCGACGACAGCGGTCACGCCTACGAAAGAAAACGAGGTTCCAGAAGCCATAAGGCATCTTCATGAAGGGGTCTCACAAGTCTCCAGCCTGATTCATGGAGAATCTACGGCCGACTGGGT
GGCTTTCTTCAGCAAAGCGACCGAAGATTTAATCAAGGCAAAGGCGTTTGAACCCGTGTCGAAAGGCGTGAAATACGTAGATATCGTCAAGGACGTTATCAACATTTTGCCGATCCATTG
GATATCACATAGCATTTTGTTCGTTCCGTTACCATCTTCTAGCTCGATCTCATCGGCATCTGTTCAGGCTGGCCTACCCCTGAAGACGAGCGCGAATCCCGGCGCGGTGTGTGGTACGAG
CAGGACACTTACCACAAGTTCGCGGTCATAGCGAGGTTTGTTTCAATTCTCTGCTTCGTCTTGAGTCTCAATGAACAACCTTTAGCTATGTTTACCTTAATTTCGACCCGGTCAACGATT
GGCATCTACGAGAATCCTCTCAGCGGTATTCTGCTGAGATCCTTGACATTATTCATGCCCACATCGAAAAGCTCACCGGTATCCAGAGGTCGGTTCATCGCAATTAACCCTCCGCTCAGC
GCTGACTGAGACTCCCGATGTACTAGCTCTCGATTCCGGACGCCTTGAATCACCTTAGTATTGGTGCTTCAAACAAGAGCCACGATTTCTTAAAGAAAGTCATTGACGCAAATGGGAAGA
ATAATACCCGGCATGAGTTGGCAGCACAAGTTTTCTCGGCTACCATTCCCACTGCACCCCTCTATTCTCAAGCGATCGCAAAGGTTGTCGACTTTTATCTCGCCAGGGAGCAAGCAGTGG
CGCGACAAGAAATCGTAAACCTGGCAAATTCCAAAGATAAAGACGCCCCCTCCAAAATCCTGGCATATGTCCGTGAAGCATTGCGCGTCAGAGGTTCCCCTGCCATACGCAAGTTTTTGA
GACTGACCTTTCCTCTAGGATTAAACCCTACTGTGGCAGGTGTTTACCGTACAGCCGCTCAGGATGTCCTTGTTGGCTCAAAGCGAGTTAATGCCACCGAGCACGCCTTTGCCAGCATCG
TGAAGGCGAATTTAGACACGTATGCGACATTTTTTCTGACAGGTTGATTGTCTCGACTGACCGAGTCGTTTTAGCCCGAAGTTTTCGGTCCCCACCCATCTGTGGCTAGTTACTCTCGGC
CAGCCGACAAGGCAGGCATAACGACTATTGGGGACTTTGGGGGTAAATTTTTAAAATTAACTAAATGATAACCCTCAACTCAACCATACGTACCAGATTGCTGTCGCCCGTCTTTTTTGA
CGCTCTGTAAGTCCACACTTCCGTTTATTTCCTTTCATCTGGCTTACTATGCACATTCAGACCGCTCCAGTGATTCTTGGAAAAATCCTATCATTAAAGAACTTGAAACCAGCACCTGGA
AAATCTGGTACCCTCCTCAGAGGTAAGAACAAATTGGTAAATCGTGACTGCTTTCCTTACTGTCGACTTCAGCTTCAAAGAAAATTGGAACGGTACCCCGAGCACGCAGTACATCAACAC
CGAGGGAATCGTTGGACCATTCCCGGACTCTCTGCTTGTTCAAAAGTGAGCTAGCATTCATTGACTCCGATCCACAAGCATTGACTATAATCTCTCCAGTTCACACCAGCTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGTCCCTTCGGTATATTCGTGACCGGATCGTCAAGCGCGTTGACTTCATCGCCGAAAGTCGCGCTCCCCTCGACACTGATGGCGCGCATCCGCAAAGCCACGTTTTTGAAAAGACGGTG
ACAGAGATACACGAACTCCTCGTCAAACCCGCTTTTCAAGTTTCAGATCTAGGCGCGTACTGGGATGCGATTCAAAATCTGAGCACTGTTGGCCTCAACGACCGGGACTTGCTGCTTGAA
AAAGTTCTCGTGTTGATGTCGAGACTTCAACACACCAAAATATCGCTGAAGGTCCAACAGTTCGTCATAAACCTCCTTTACAAGGATCTGCCCCACCCACCAAGCGGCTATTTGGGCCTT
TCTCCGTCATCTACCCTTTGCCATCACCACAAGACATTAGAAGACGCCTCCACACATGCCCTTGTGAAATATGCTTATCGCGCTGCTGATGGATCAAACTACAATCCCCTCTTCCCCACA
CTCGGCAAAGCAGGGTCACCTTACGCCCGTTCCGTACCCTCCGCAAACATCGTGCCGAGTTCCGCCCTCCCTGATCCTGAACTGGTCTTCGATACCCTCCTTCGACGCCAAAAGTTCGTC
CCACACCCCGGAGGCATTTCTTCCCTATTCTTCGCGTTCGCGGATCTGGTGATCCACAGCATCTTCAACACCAACCACTTCGACTGGTCGATCAACGACGCAAGCAGTTACCTCGATCTT
AGCGTACTCTACGGTAGCTCCGAGTCGCAAGTCAATTCAGTCAGGAGGAGAGATGGAACTGGAAAATTGTTCGATGATGTTTTCGCGGATAGTCGTTTGCTATTCATGCCCCCAGCAAGC
TGTGCGCTGTTGGTTTTGCTCAACAGGAATCATAATTACATTGCGGAGAAAATCTTGAATATCAATGAAAACGGCAATCTCAGCTCGCCGCCTCCCGAAGACGAAAAGTTACGGCTGGCG
CAAGATGACGAAATCTTTCATCGAGCCCGCCTCGTAAATTGTGGATATTTCATGCATATCATTCTCGGAGATTATGTAGGCGCAATCTTGGGGCTCGTCCGTGATGAATCCGACTGGCGT
CTCGATCCCCTCATGACGATGCGTGAAATCAGTCACGAATTTGTCCCACAGGGTGAAGGCAACGTGGTTTCCATAGAGTTCAACCTCCTCTATAGGTGGCATGCAACGCTGTCTGCACAG
GACGAGAAATGGACGGAAGGAGAGTTCAACAAGCTCTTCAAGGGCAAAAATCCCAACGACGTTACCATTGAAGATTTCAAAAACGCGGCCCATGAATTTATGTTACCCCCGAAGGACCCC
AGAGTCTGGACTTTCAAAGATTTGAAGCGGGATGACAAGGGCCGTTTCAACGATGCCGACCTTGCACAGATTTTGCAAGATGCTACAGAATGGCGCGCAGGAGCATATGGAGCGCGAGGA
ACTCCTGAAGTTCTCAGAGTGATTGAGATTATGGGGATGAAACAGGCGAGGTCTTGGGGAACTTGTTCGCTTAACGAGTTCAGGAAGTTTTTGGGGCTCAGGCCATACGAGACATTTGCA
GAGTGGAATCCAGATCGTGAAATCCATACCGCAGCGGCTGCATTGTACAGAGACATTGACAACTTGGAGCTCCACGTCGGTCTGCAAGCAGAGCAAACTAAAAAGCCCGGGCCAGGAGCT
GGCTTGTGCCCTGGTTACACCATCTCACGCTCCATTCTTGCTGATGCAGTTTGCCTCACTCGAGGAGATCGTTTCTTGACTGTGGACTTCAATCCCTTCAATCTTACCTCTTGGGGATAT
CAAGACTGTCAATACGACAAGAAAGACGGTTCATACGGCGGTTTACTTACGAAGTTGCTTTTCCGCACATTGCCGGAGCACTACCAACGGGGATCAGCATACGCCCACTTCCCTTTCTTG
GACCCCGTATTCATGAGAGAAGAAAACTTGGCGAAGACAAACCCATCTCTAGTCGACAAGTACATCTGGACTCGGCCGCGCCAGGATTCACCCACCGTTCCTTTCGACACTCTTGAGAGT
GTCAAGAAAGTTCTAAAGGACCCTCACTTTGTGTCTGCCTACGACCATCGACTTTATAACGTAGTTCCAGAAGCCATAAGGCATCTTCATGAAGGGGTCTCACAAGTCTCCAGCCTGATT
CATGGAGAATCTACGGCCGACTGGGTGGCTTTCTTCAGCAAAGCGACCGAAGATTTAATCAAGGCAAAGGCGTTTGAACCCGTGTCGAAAGGCGTGAAATACGTAGATATCGTCAAGGAC
GTTATCAACATTTTGCCGATCCATTGGATATCACATAGCATTCTCGATCTCATCGGCATCTGTTCAGGCTGGCCTACCCCTGAAGACGAGCGCGAATCCCGGCGCTATGTTTACCTTAAT
TTCGACCCGGTCAACGATTGGCATCTACGAGAATCCTCTCAGCGGTATTCTGCTGAGATCCTTGACATTATTCATGCCCACATCGAAAAGCTCACCGGTATCCAGCTCTCGATTCCGGAC
GCCTTGAATCACCTTAGTATTGGTGCTTCAAACAAGAGCCACGATTTCTTAAAGAAAGTCATTGACGCAAATGGGAAGAATAATACCCGGCATGAGTTGGCAGCACAAGTTTTCTCGGCT
ACCATTCCCACTGCACCCCTCTATTCTCAAGCGATCGCAAAGGTTGTCGACTTTTATCTCGCCAGGGAGCAAGCAGTGGCGCGACAAGAAATCGTAAACCTGGCAAATTCCAAAGATAAA
GACGCCCCCTCCAAAATCCTGGCATATGTCCGTGAAGCATTGCGATTAAACCCTACTGTGGCAGGTGTTTACCGTACAGCCGCTCAGGATGTCCTTGTTGGCTCAAAGCGAGTTAATGCC
ACCGAGCACGCCTTTGCCAGCATCGTGAAGGCGAATTTAGACCCCGAAGTTTTCGGTCCCCACCCATCTGTGGCTAGTTACTCTCGGCCAGCCGACAAGGCAGGCATAACGACTATTGGG
GACTTTGGATTGCTGTCGCCCGTCTTTTTTGACGCTACCGCTCCAGTGATTCTTGGAAAAATCCTATCATTAAAGAACTTGAAACCAGCACCTGGAAAATCTGGTACCCTCCTCAGCTTC
AAAGAAAATTGGAACGGTACCCCGAGCACGCAGTACATCAACACCGAGGGAATCGTTGGACCATTCCCGGACTCTCTGCTTGTTCAATTCACACCAGCTTGA

Retrieve as FASTA