1. Browse the Database
  2. View Redoxidase
Entry information : JargLDS01
Entry ID 10729
Creation 2012-03-08 (Christophe Dunand)
Last sequence changes 2012-03-08 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-11 (Catherine Mathe)
Peroxidase information: JargLDS01
Name JargLDS01
Class Linoleate diol synthase (PGHS like)    [Orthogroup: LDS001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Jaapiaceae Jaapia
Organism Jaapia argillacea    [TaxId: 202697 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value JargLDS01
start..stop		 S start..stop
PplLDS01-1 1122 0 5..1067 7..1005
PplLDS01-2 1102 0 5..1066 7..1004
LbiLDS01 1086 0 1..1068 1..1071
ScomLDS01 1030 0 5..1067 3..1109
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 415422..415592 169 N° 2 415648..415710 61 N° 3 415768..415852 83 N° 4 415908..416440 531
N° 5 416500..416718 217 N° 6 416781..416945 163 N° 7 417001..417080 78 N° 8 417141..417312 170
N° 9 417366..417399 32 N° 10 417449..417492 42 N° 11 417552..417738 185 N° 12 417793..418151 357
N° 13 418204..418383 178 N° 14 418440..418525 84 N° 15 418579..418699 119 N° 16 418756..419053 296
N° 17 419104..419117 12 N° 18 419171..419278 106 N° 19 419330..419409 78 N° 20 419462..419489 26
N° 21 419542..419621 78 N° 22 419676..419766 89 N° 23 419826..419837 10  
join(415422..415592,415648..415710,415768..415852,415908..416440,416500..416718, 416781..416945,417001..417080,417141..417312,417366..417399,417449..417492,41755 2..417738,417793..418151,418204..418383,418440..418525,418579..418699,418756..41 9053,419104..419117,419171..419278,419330..419409,419462..419489,419542..419621, 419676..419766,419826..419837)


exon

Literature and cross-references JargLDS01
DNA ref. JGI genome:   scaffold_29 (415422..419837)
Cluster/Prediction ref. JGI gene:   162433
Protein sequence: JargLDS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1069 (533)
PWM (Da):   %s   117576.92 (57340.3)  
PI (pH):   %s   5.67 (4.19) Peptide Signal:   %s   cut: 27 range:27-559
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MATKILRTISNAAEYVSDSKAPVDEDGGYPIPPEISVDINELEGWLKTGPPFSIKDIPAYVDAVKNLNSVGINDRKFFLEKLLTLMARLGDGNEFSTQLQHFVIDALYKDLPHPPSSYLS
LASAPTPVSAPLGVPYAYRPADGSNYNPLFPTLGQAGAPYARSVPSSNFTPQRSLPDAGLLFDTLLKRDKFTPHPGGISSLFFAFADLIIHSIFNTNPRDWTKNEVSSYLDLSVLYGSSD
KDVASVRKSDGTGKIWEDSFADPRLLFMPPSVCALLVIFSRNHNYVAEKLLAINEKGTYKDPASLSGDALAAQDEEIFQRTRLVNSGFFVQAIFADYVGAILGLVRDGLTWRLNPLDTMR
QLDHEFSPQGEGNVVSLEFNLLYRWHATTSQQDTKWTEDLFQEVFSGKDFSTITVDDFKTIAVQKMIPKTPPKEWTFDGLTRDEKTGKFSDAALAKILQDATEWSASAFKARGTPEVLRV
IEIMGIEQSRSWGACSLNEFRKFMGLKEYDNFAEWNPDPVINKAAEALYGHIDNLELHVGMQAEEAKVPMPGAGLCPGYTISRAILADAVCLTRGDRFLTVDNTPFNLTSWGYQDCQIDK
NDGSFGGMLTKMLFRHLPDYYPRNSTYAFFPFLVPSSMKGFAEKLGDGTVNKYSWTRPTAPAPTIKVETFEGVSWVLTSPQNFLPQSRTRMEILSKGAAANRKLVDGTLFNNSQIAKWRS
SFRQTTLGLIKDKSVSHVGSTARYVDVVKDVVNLVPIHWIANEVVGVSMKTTANPSGISREQDLYNKFADVCNYIFLNYDPYHDLELHNDAAKTIAEIAGTLKSHLERLKDGLFSISGLV
DTTKHFWTGANDHSDAFLKSLLSANKNANLDDLAKALVLEVVGTAALYSKAIAHVIDFYLDQDAACKDILQLATVNTTASDAKLSSYIREALRLKPVVSGVYSVAQHDATVGPQTKVSKG
TNVYASVIKADLDPSVFGPDPTTPNFTRPVAGLLGLEDYGLLTSSFFEKTASEVLIAVLTLKSVARAPGYSGIFNTFTQDQSGSKEVLYINPGGVVTPWPSSLVLQYTA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (22 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACCAAGATATTAAGAACCATTAGCAATGCTGCAGAGTATGTCAGCGATAGCAAGGCGCCCGTGGACGAGGACGGGGGCTATCCCATCCCTCCCGAAATTTCGGTGGACATCAAC
GAACTCGAGGGGTGGCTCAAGACTGGCCCTCCCTTCTCTATCAAGGATATCTCGTCAGTGTCGTCATCGCCGTTCTCTTGCTCGACGTCTGATTATCTATCCCTCTAGCCTGCCTATGTT
GATGCCGTGAAGAATTTGAACAGCGTTGGGATCAATGATCGTAAATTCTTTTTGTGAGTAGCTTTGTGTAGGTGGCATGCCACGGCGGTCGCCAACTGATTTCGCCATAGCTCGAGAAAC
TCTTGACTCTCATGGCGCGTCTTGGCGATGGGAATGAGTTCTCCACACAGCTCCAACATTTTGTGATCGATGCTTTTGTGAGTCGGTTTCCTGTCTCTGTGCAAGCCCACATATCAATTC
ATATCGCGCAAGTGTACAAGGACTTGCCCCATCCTCCAAGCAGCTACCTTTCTCTTGCCTCTGCGCCGACACCTGTCTCCGCTCCGCTCGGTGTTCCATATGCCTACCGTCCTGCTGATG
GTTCCAACTACAACCCTCTCTTCCCAACTCTTGGCCAAGCAGGCGCTCCTTATGCACGCTCTGTGCCTTCGTCCAACTTCACTCCCCAACGCTCCTTGCCCGACGCTGGCCTCCTCTTCG
ACACCCTCCTTAAACGCGACAAATTCACTCCCCATCCCGGAGGAATTTCCAGCTTGTTTTTCGCTTTCGCCGATTTGATCATCCATAGCATCTTCAACACCAACCCCCGAGATTGGACGA
AGAATGAAGTCAGCAGTTATTTGGATTTGAGTGTATTATACGGGAGCTCAGATAAAGATGTGGCGAGCGTGAGGAAGAGCGATGGAACCGGCAAGATATGGGAAGATTCATTCGCTGATC
CCAGATTGCTGTTCATGCCACCGTCTGTGTGCGCTCTCTTGGTGATTTTCAGTCGTAACCACAACACGTGAGTTTATTTACCTCCTTTCTTCGGATATTCGTTCCTGACGGTTTATTTTG
GAACAGTACGTGGCGGAGAAGCTCTTGGCCATCAACGAGAAGGGAACATACAAAGATCCTGCCTCCTTGAGTGGTGATGCTCTCGCAGCCCAAGACGAGGAAATTTTCCAGCGCACCAGA
CTCGTTAACAGCGGATTCTTCGTGCAAGCCATCTTCGCTGATTACGTCGGTGCTATCTTGGGTCTTGTCAGAGATGGCTTGACATGGAGATTAAACCCTCTGGATATGTAAGTGCAATCC
AACAATGTTCTCACACCACACCCGAGCTAATCGTTTCTGATATGCATAGACGATGCGTCAACTTGATCACGAATTCAGCCCTCAAGGAGAAGGAAATGTTGTCTCGCTCGAGTTTAACTT
GCTTTACAGGTGGCATGCTACCACTTCCCAGCAGGATACCAAGTGGACTGAGGACCTCTTCCAGGAGGTTTTCAGTGGAAAGGACTTCAGCACGCGGTATGTCTCCTTTGCCGTTGTACC
GAGTAGTTGCTGACGTCATCGAGGTGGATAGATCACTGTGGATGATTTCAAGACTATTGCTGTCCAGAAGATGATTCCTAAGACTCCTCCGAAGGAGTGGACTTTCGATGGGGGTTAGCC
TATGCTGTCGTACTCCCGTCGTGATTGCTTGTGTCTGATGATCTCTCTCATAGCCTGACGCGAGACGAGAAGACGGGCAAGTTCTCTGATGCGGCCCTTGCCAAGATTCTACAAGACGCC
ACAGAGTGGTCTGCTAGTGCGTTCAAGGCTCGGGGGACTCCGGAGGTTTTGAGAGTCATTGAGATTATGGGAATCGAACAATCTAGGAGTTGGGGTGCTTGCTCTCTGTACGTCGGTCGC
CATCACAGTTTTGACCCTGGCTTACATGGTCACGTCGTAGTTGAACGAATTCAGGAAATTTATGGGTTTGAAAGAGGTCGGTCCAAGGTCTCCAGGGAGTATGTCAAGGCTGACCAATAT
GATAGAGTACGATAACTTCGCGGAGTGGAATCCTGATCCTGTTATCAACACGTACGTCGCCATAGTTTTGATCCTATCCCTTCCTCACGAACGTTCTCCGACTACGATAGAAAGCGGCTG
AAGCCCTGTACGGACATATCGACAACCTTGAGTTGCACGTCGGTATGCAAGCCGAAGAAGCGAAGGTTCCCATGCCTGGAGCCGGTCTTTGCCCTGGTTATACCATCTCCAGAGCTATCC
TCGCAGATGCTGTTTGTTTGACTCGTGGCGATAGATTCTTGACTGTCGACAATACTCTCGTGGGTTTCCCTTACTACTGCGATGGCTATCTTTTTACCTACCCTTCTACTTAGCCTTCAA
CTTGACCTCTTGGGGTTATCAAGACTGTCAAATTGACAAGAATGATGGGTCTTTCGGGGGAATGCTCACCAAGATGCTCTTCCGCCATCTCCCAGATTACTATCCTCGCAATTCAACCTA
CGCGTTCTTCCCGTTCTTGGTTCCGTCTTCCATGAAGGGCTTTGCCGAAAAGTTGGGAGACGGCACTGTCAATAAGTACTCCTGGACGAGGCCCACTGCCCCAGCCCCTACCATCAAGGT
CGAGACATTCGAGGGTGTTTCGTGGGTGCTGACGAGTCCCCAGAACTTTTTGCCCCAGTCTCGCACCAGAATGGAGATTTTATCAAAAGGTGCTGCTGCAAACCGCAAGCTCTCGTATGT
CGACATTTTCTCTTGCGCGATTTATTGCTAACATGTTGTTGCTTAGGTGGACGGCACATTATTTAACAATAGCCAAATCGCCAAGTGGCGATCATCGTTTAGGCAAACGACTTTGGGGTT
GATCAAAGACAAGAGTGTCAGCCATGTCGGGTCGACTGCTCGTTATGTGGATGTAGTCAAGGACGTCGTCAATCTCGTTCCCATCCACTGGATCGCAAATGAAGTATAGTGGGTATCATT
GAGTTCTTGCTGGTCTTCTGCCTCGCCTGATGCAGATTGGTTAGGTTGGAGTTTCGATGAAGACCACTGCAAACCCGTCTGGGATTTCCAGGGAGCAAGATTTGTACAACAAGTTTGCCG
ATGTCTGCAAAAGTGGGTAATTTCTTTCCTTGGACTAGGTTTGCTTCTCACGCGATGTTCATCAGCTATATATTCCTCAATTATGATCCTTATCATGACCTCGAACTCCATAACGATGCT
GCTAAGACAATTGCTGAAATTGCGGGGACCCTCAAGTCGCACCTCGAGAGATTGAAGGATGGCCTGTGGTGGGTGATATCTGCTGCCTTCTAATACTTTCGCTGACTGAATACTGCCATG
CAAGTTCTCTATCAGTGGCCTAGTGGACACGACGAAGCACTTCTGGACCGGCGCTAACGACCACAGTGATGCCTTTTTGAAGTCATTGCTTTCGGCCAACAAGAACGCAAATTTGGACGA
TTTGGCCAAAGCTTTGGTGTTGGAGGTTGTTGGGACGGCTGCTCTCTACTCCAAGGCCATCGCCCACGTCATCGATTTTTATCTGGACCAAGACGCAGCCTGCAAAGATATCCTCCAGCT
CGCGACTGTGAATACCACAGCCTCGGACGCAAAGCTTTCCAGCTACATTCGCGAGGCGCTTCTCGTGAGTCTTATCGTTTCGTGATCGGGGACCAACTGCTGAGTGTTGCTTAGGTCTCA
AGCCGGTGTGGCACGTGTCATGCATATTGGATTGTCGGGAGACGACTGATCTTTATTGTACAGGTTTCAGGAGTCTATTCCGTAGCGCAACACGATGCCACGGTTGGCCCTCAAACTAAG
GTCTCAAAGGGCACGAACGTCTATGCAAGTGTCATCAAGGCGGACCTTGATATGTGAGCTTCGTCTGTCGCTGGACTCCATGATCGGAGCTGACAACTTGACAGCCCAGTGTCTTTGGAC
CTGACCCCACAACCCCCAACTTCACGCGACCCGTCGCAGGTTTGCTAGGTTTGGAGGACTACGGGGGTGCGAAAGTTGTTCTCCAACCCTGCTATCTTTTGCTCATTTCTCGTTCCAGCC
TTCTCACATCTTCTTTCTTCGAGAAGAGGTGAATATCGCAGTGAATTGTATCTTATTCTCATCCTAACCTTCCGATAAAGACTGCATCCGAAGTGCTCATCGCCGTCTTGACTTTGAAGT
CCGTGGCAAGGGCGCCTGGCTACTCCGGAATCTTCAATACACGTATGTGTTGAAATTTTCTTTGCTTGGGTGATAACGTTCAGATGAGCTTCTCAGGTTTACACAAGATCAAAGCGGTTC
GAAGGAAGTTTTGTATATCAACCCAGGTGGTGTGGTGACTCCTTGGCCCTCGTCACTGGTGTTGCAGAGGTGTGTTATCCCGTGGTTTTACTGTGTCGTCCTCCACTGAAAGCCATCCTG
TTTGACAGTACACCGCATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCACCAAGATATTAAGAACCATTAGCAATGCTGCAGAGTATGTCAGCGATAGCAAGGCGCCCGTGGACGAGGACGGGGGCTATCCCATCCCTCCCGAAATTTCGGTGGACATCAAC
GAACTCGAGGGGTGGCTCAAGACTGGCCCTCCCTTCTCTATCAAGGATATCCCTGCCTATGTTGATGCCGTGAAGAATTTGAACAGCGTTGGGATCAATGATCGTAAATTCTTTCTCGAG
AAACTCTTGACTCTCATGGCGCGTCTTGGCGATGGGAATGAGTTCTCCACACAGCTCCAACATTTTGTGATCGATGCTTTGTACAAGGACTTGCCCCATCCTCCAAGCAGCTACCTTTCT
CTTGCCTCTGCGCCGACACCTGTCTCCGCTCCGCTCGGTGTTCCATATGCCTACCGTCCTGCTGATGGTTCCAACTACAACCCTCTCTTCCCAACTCTTGGCCAAGCAGGCGCTCCTTAT
GCACGCTCTGTGCCTTCGTCCAACTTCACTCCCCAACGCTCCTTGCCCGACGCTGGCCTCCTCTTCGACACCCTCCTTAAACGCGACAAATTCACTCCCCATCCCGGAGGAATTTCCAGC
TTGTTTTTCGCTTTCGCCGATTTGATCATCCATAGCATCTTCAACACCAACCCCCGAGATTGGACGAAGAATGAAGTCAGCAGTTATTTGGATTTGAGTGTATTATACGGGAGCTCAGAT
AAAGATGTGGCGAGCGTGAGGAAGAGCGATGGAACCGGCAAGATATGGGAAGATTCATTCGCTGATCCCAGATTGCTGTTCATGCCACCGTCTGTGTGCGCTCTCTTGGTGATTTTCAGT
CGTAACCACAACTACGTGGCGGAGAAGCTCTTGGCCATCAACGAGAAGGGAACATACAAAGATCCTGCCTCCTTGAGTGGTGATGCTCTCGCAGCCCAAGACGAGGAAATTTTCCAGCGC
ACCAGACTCGTTAACAGCGGATTCTTCGTGCAAGCCATCTTCGCTGATTACGTCGGTGCTATCTTGGGTCTTGTCAGAGATGGCTTGACATGGAGATTAAACCCTCTGGATACGATGCGT
CAACTTGATCACGAATTCAGCCCTCAAGGAGAAGGAAATGTTGTCTCGCTCGAGTTTAACTTGCTTTACAGGTGGCATGCTACCACTTCCCAGCAGGATACCAAGTGGACTGAGGACCTC
TTCCAGGAGGTTTTCAGTGGAAAGGACTTCAGCACGATCACTGTGGATGATTTCAAGACTATTGCTGTCCAGAAGATGATTCCTAAGACTCCTCCGAAGGAGTGGACTTTCGATGGCCTG
ACGCGAGACGAGAAGACGGGCAAGTTCTCTGATGCGGCCCTTGCCAAGATTCTACAAGACGCCACAGAGTGGTCTGCTAGTGCGTTCAAGGCTCGGGGGACTCCGGAGGTTTTGAGAGTC
ATTGAGATTATGGGAATCGAACAATCTAGGAGTTGGGGTGCTTGCTCTTTGAACGAATTCAGGAAATTTATGGGTTTGAAAGAGTACGATAACTTCGCGGAGTGGAATCCTGATCCTGTT
ATCAACAAAGCGGCTGAAGCCCTGTACGGACATATCGACAACCTTGAGTTGCACGTCGGTATGCAAGCCGAAGAAGCGAAGGTTCCCATGCCTGGAGCCGGTCTTTGCCCTGGTTATACC
ATCTCCAGAGCTATCCTCGCAGATGCTGTTTGTTTGACTCGTGGCGATAGATTCTTGACTGTCGACAATACTCCCTTCAACTTGACCTCTTGGGGTTATCAAGACTGTCAAATTGACAAG
AATGATGGGTCTTTCGGGGGAATGCTCACCAAGATGCTCTTCCGCCATCTCCCAGATTACTATCCTCGCAATTCAACCTACGCGTTCTTCCCGTTCTTGGTTCCGTCTTCCATGAAGGGC
TTTGCCGAAAAGTTGGGAGACGGCACTGTCAATAAGTACTCCTGGACGAGGCCCACTGCCCCAGCCCCTACCATCAAGGTCGAGACATTCGAGGGTGTTTCGTGGGTGCTGACGAGTCCC
CAGAACTTTTTGCCCCAGTCTCGCACCAGAATGGAGATTTTATCAAAAGGTGCTGCTGCAAACCGCAAGCTCGTGGACGGCACATTATTTAACAATAGCCAAATCGCCAAGTGGCGATCA
TCGTTTAGGCAAACGACTTTGGGGTTGATCAAAGACAAGAGTGTCAGCCATGTCGGGTCGACTGCTCGTTATGTGGATGTAGTCAAGGACGTCGTCAATCTCGTTCCCATCCACTGGATC
GCAAATGAAGTAGTTGGAGTTTCGATGAAGACCACTGCAAACCCGTCTGGGATTTCCAGGGAGCAAGATTTGTACAACAAGTTTGCCGATGTCTGCAACTATATATTCCTCAATTATGAT
CCTTATCATGACCTCGAACTCCATAACGATGCTGCTAAGACAATTGCTGAAATTGCGGGGACCCTCAAGTCGCACCTCGAGAGATTGAAGGATGGCCTGTTCTCTATCAGTGGCCTAGTG
GACACGACGAAGCACTTCTGGACCGGCGCTAACGACCACAGTGATGCCTTTTTGAAGTCATTGCTTTCGGCCAACAAGAACGCAAATTTGGACGATTTGGCCAAAGCTTTGGTGTTGGAG
GTTGTTGGGACGGCTGCTCTCTACTCCAAGGCCATCGCCCACGTCATCGATTTTTATCTGGACCAAGACGCAGCCTGCAAAGATATCCTCCAGCTCGCGACTGTGAATACCACAGCCTCG
GACGCAAAGCTTTCCAGCTACATTCGCGAGGCGCTTCGTCTCAAGCCGGTGGTTTCAGGAGTCTATTCCGTAGCGCAACACGATGCCACGGTTGGCCCTCAAACTAAGGTCTCAAAGGGC
ACGAACGTCTATGCAAGTGTCATCAAGGCGGACCTTGATCCCAGTGTCTTTGGACCTGACCCCACAACCCCCAACTTCACGCGACCCGTCGCAGGTTTGCTAGGTTTGGAGGACTACGGC
CTTCTCACATCTTCTTTCTTCGAGAAGACTGCATCCGAAGTGCTCATCGCCGTCTTGACTTTGAAGTCCGTGGCAAGGGCGCCTGGCTACTCCGGAATCTTCAATACGTTTACACAAGAT
CAAAGCGGTTCGAAGGAAGTTTTGTATATCAACCCAGGTGGTGTGGTGACTCCTTGGCCCTCGTCACTGGTGTTGCAGTACACCGCATGA

Retrieve as FASTA