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Entry information : ZmPrx139(Zm00001d042019 / GRMZM2G361475 [6a])
Entry ID 6701
Creation 2009-04-11 (Christophe Dunand)
Last sequence changes 2009-04-11 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2022-12-30 (Christophe Dunand)
Peroxidase information: ZmPrx139(Zm00001d042019 / GRMZM2G361475 [6a])
Name ZmPrx139(Zm00001d042019 / GRMZM2G361475 [6a])
Class Class III peroxidase    [Orthogroup: Prx005]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Zea
Organism Zea mays    [TaxId: 4577 ]
Cellular localisation N/D
Tissue types Embryos
Endosperm
Kernels
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value ZmPrx139
start..stop		 S start..stop
SbPrx69 602 0 1..355 1..359
SiPrx07 564 0 36..357 34..356
PviPrx03 538 0 28..346 20..343
OsPrx23 535 0 7..357 1..358
Literature and cross-references ZmPrx139(Zm00001d042019 / GRMZM2G361475 [6a])
Literature Winkler R and García-Lara S. Activity-directed identification of maize kernel peroxidases associated with postharvest insect resistance. Mol. BioSyst., 2010, 6, 1810-1812.
Protein ref. UniProtKB:   B4FIC6 [5' end]  B6TDA8 [5' end]
DNA ref. GenBank:   AC216267.3 (66226..67454) [Sequencing error]
mRNA ref. GenBank:   NM_001139377 [Sequencing error]
Cluster/Prediction ref. UniGene:   Zm.34269
Protein sequence: ZmPrx139(Zm00001d042019 / GRMZM2G361475 [6a])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   357 (330)
PWM (Da):   %s   37996.39 (35426.1) Transmb domain:   %s   i7-29o
PI (pH):   %s   8.36 (8.76) Peptide Signal:   %s   cut: 28 range:28-357
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAHAVTLAAA AAVVVLIVVC CCSSSEAAGH SVNARQPPLA PSLSLDFYKR SCPRAESVVR RFVQDAVRRD AGLAAGLLRL HFHDCFVQGC DASVLLDGSA TGPGEQQAPP NLTLRPTAFK  AINDIHDRLQ KECGGAVVSC SDVLALAARD SVVVSGGPSY KVPLGRRDSA SFATREDVLS GLPPPTAAVP ALLAVLSKIN LDATDLVALS GGHTIGLGHC ASFESRLFPR QDPTLNATFA 
GHLRRTCPAK GTDRRTPLDV RTPDAFDNKY YVNLVNREGL FTSDQDLFSN PGTRPLVEKF ARSQRDFFDQ FAFSVVKMGQ IKVLTGAQGQ IRRNCSARNA GMTWSVVDEA AQQSFVF 

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Remarks Complete sequence from genomic (chromo 3, introns 2 and 3), 19 ESTs and protein expression. All the sequence present the similar frameshift (or sequencing error). Incorrect prediction from Phytozome ( exon 3 is not predicted).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTCATG CTGTTACGCT CGCTGCTGCA GCCGCGGTCG TCGTCCTCAT CGTCGTCTGC TGCTGCTCCT CTTCGGAGGC CGCCGGCCAC AGCGTCAACG CGAGGCAGCC GCCGCTGGCG  CCCAGCCTGT CCTTGGACTT CTACAAGCGG AGCTGCCCCA GGGCGGAGTC CGTCGTGCGG AGGTTCGTGC AGGACGCCGT GCGCAGGGAC GCCGGCCTCG CAGCCGGCCT CCTCCGCCTC  CACTTCCACG ACTGCTTCGT CCAGGGCTGC GACGCGTCCG TGCTCCTGGA CGGCTCAGCC ACCGGCCCGG GCGAGCAGCA GGCGCCGCCC AACCTCACGC TGCGCCCCAC CGCGTTCAAG  GCCATCAACG ACATCCACGA CCGCCTCCAG AAGGAGTGCG GTGGCGCAGT CGTGTCCTGC TCCGACGTCC TCGCGCTCGC CGCCAGGGAC TCAGTCGTCG TGGTACGTCG TGTCGTGGCA  TGCACATGCA CTGCACACTC CTTGATTAAT TAAATTGGTT GGTCGTTCTT CATGCATGCT ATTGCTTACA CTGCCTGCCT GCCTCGCTCG TCTGTCGTCT CCTTAATTGC ATATTTGCAT  GCATTGCAGT CCGGAGGTCC CAGCTACAAG GTGCCGCTGG GTCGGCGCGA CAGTGCGAGC TTCGCGACGC GAGAGGACGT CCTGAGCGGG CTCCCGCCGC CGACGGCCGC CGTGCCGGCG  CTTCTCGCCG TGCTGTACTG CTGTCCAAGA TCAACCTGGA CGCGACGGAC CTGGTGGCGC TGTCGGGCGG CCACACCATC GGGCTGGGCC ACTGCGCGTC CTTCGAGAGC CGCCTGTTCC  CGCGCCAGGA CCCGACGCTG AACGCCACCT TCGCCGGCCA CCTGCGCCGG ACCTGCCCGG CCAAGGGCAC CGACCGCCGG ACGCCGCTGG ACGTGCGCAC GCCCGACGCG TTCGACAACA  AGTACTACGT CAACCTGGTG AACCGTGAGG GGCTCTTCAC CTCCGACCAG GACCTCTTCA GCAACCCCGG CACCAGGCCC CTCGTCGAGA AGTTCGCGCG CAGCCAGAGA GACTTCTTCG  ACCAGTTCGC CTTCTCCGTG GTGAAGATGG GGCAGATCAA GGTGCTCACG GGCGCGCAGG GGCAGATCCG CAGGAACTGC TCCGCCCGCA ACGCAGGCAT GACGTGGTCC GTCGTCGACG 
AGGCTGCACA GCAGAGCTTC GTGTTCTAG 

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