Entry information : PplKat01
Entry ID 6719
Creation 2009-04-29 (Christophe Dunand)
Last sequence changes 2009-04-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-04-17 (Catherine Mathe (Scipio))
Peroxidase information: PplKat01
Name PplKat01
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Coriolaceae Postia
Organism Postia placenta    [TaxId: 104341 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PplKat01
start..stop
S start..stop
PcarKat01 800 0 1..506 1..506
PcKat01 789 0 1..506 1..506
LbiKat01 787 0 1..506 1..516
SlutKat01 771 0 1..506 1..516
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '6719' 'join(140717..140840,140893..140943,141005..141184,141240..141397,141454..141747,141801..142045,142102..142325,142382..142507,142567..142694)' Exons


exon

Literature and cross-references PplKat01
Literature Martinez,D. et al., Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proc. Natl. Acad. Sci. U.S.A. 106 (6), 1954-1959 (2009)
DNA ref. JGI genome:   scaffold_125 (140717..142694)
mRNA ref. JGI transcript:   123169
Protein sequence: PplKat01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   509
PWM (Da):   %s   56982.81 Transmb domain:   %s   i64-86o101-123i144-166o181-203i224-246o256-278i317-336o419-441i
PI (pH):   %s   7.21
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MPSKQVFSTQDNAVYTTSVGAPVAQPYAAQRIGSVGPLLLQDFHHIDLLAHFDRERIPERVVHAKGAGAHGYFEVTHDITDLSCASIFSKVGNKARATVRFSTVGGESGSPDTARDPRGF
AIKIKTDEGNLDWVFNNTPVFFIRDPAKFPHFIHTQKRDPQTHLKDADMF
DYLSLNPESIHQVMILFSDRGHPDGYHNMHAYSGHTFKFVNKDGKFHYVQIHFLKDGGAKSLTEPEAGRL
AGENPDYGIQSLFEAIEEGNYPSWTGYV
QTMTAEQAEKFRYNVLDLTKVWPHKEFPLRPFGKLVLNENPQNYFAEIEQAAFSPSHTVPGIEPSADPVLQSRLFSYPDTHRHRLGTNYNQL
PVNAPIAPVANFQRDGAMTFVSQGARPNYQSSLVPLKYKPKAYEEVKHETWLGHANADLSFVT
LDFEQPRALYQKVFSDTDRDHLVHNIKVHLRNAKSIEVKNRTISVWAAVDQSLGDRI
AAAIGVAPVPALKVAPASEAIRFKTFA

Retrieve as FASTA  
Remarks Complete sequence from genomic (8 introns) and 20 ESTs. Also found in scaffold_49 (226476..224497) with minor mismatches.
DNA
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CDS
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