1. Browse the Database
  2. View Redoxidase
Entry information : BrPrx72-1Ab_other (Bra012061)
Entry ID 6886
Creation 2009-08-06 (Christophe Dunand)
Last sequence changes 2012-07-20 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2012-07-20 (Christophe Dunand)
Peroxidase information: BrPrx72-1Ab_other (Bra012061)
Name (synonym) BrPrx72-1Ab_other (Bra012061)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx72-1Ab_other
start..stop		 S start..stop
RsPrx72-1A 664 0 1..335 1..335
BrPrx72-1Aa_other 662 0 1..335 1..336
TsPrx72 659 0 1..335 1..335
ThPrx72 658 0 1..335 1..335
Literature and cross-references BrPrx72-1Ab_other (Bra012061)
DNA ref. GenBank:   AJ857282.1 [3' end]
Protein sequence: BrPrx72-1Ab_other (Bra012061)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   335 (312)
PWM (Da):   %s   37086.88 (34745.6)  
PI (pH):   %s   8.62 (8.72) Peptide Signal:   %s   cut: 24 range:24-335
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAVSLNILIA ALSLIAFSPL CLSSKAYGSG GYLFPQFYDH SCPKAQEIVQ LIVAKAFAQD PRMPASLLRL HFHDCFVKGC DASILLDNSG SIISEKRSNP NRNSARGFEV IEEIKHALEQ  ECPETVSCAD ILALAARDST VITGGPSWEV PLGRRDARGA SLSGSNNDIP APNNTFQTIL TKFKRQGLNL VDLVSLSGSH TIGNSRCTSF RQRLYNQSGN GKPDLTLNQY YASVLRKQCP 
RSGGDQNLFF LDLVTPFKFD NHYFKNLIMY KGLLSSDEVL FTKNRESKEL VELYAENQEA FFEQFARSMV KMGNISPLTG ARGEIRRICR RVNHA 

Retrieve as FASTA  
Remarks Partial sequence from GSS. 5' end is missing. No EST. Incorrect predcition from Phytozome (wrong 3' end due to extrga between LYAE and NQEA => confirmed by EST).