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Entry information : BrPrx04-1Ab_other (Bra026822)
Entry ID 6888
Creation 2009-08-03 (Christophe Dunand)
Last sequence changes 2012-08-14 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2012-08-14 (Christophe Dunand)
Peroxidase information: BrPrx04-1Ab_other (Bra026822)
Name (synonym) BrPrx04-1Ab_other (Bra026822)
Class Class III peroxidase     [Orthogroup: Prx014]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx04-1Ab_other
start..stop		 S start..stop
BrPrx04-1Aa_other 601 0 1..315 1..317
BstrPrx77 598 0 1..316 1..317
TsPrx04-1 594 0 1..316 1..317
TsPrx04-2 592 0 1..315 1..316
Literature and cross-references BrPrx04-1Ab_other (Bra026822)
DNA ref. GenBank:   DX910699.1 [Fragment]
Protein sequence: BrPrx04-1Ab_other (Bra026822)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   315 (296)
PWM (Da):   %s   33727.84 (31519.7) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.87 (7.68) Peptide Signal:   %s   cut: 20 range:20-315
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIFKIIVLL LSLSCFCQAQ LSPTFYDQIC PNALSTIRSS IRTAISRERR MAASLIRLHF HDCFVNGCDA SVMLVATPTM ESERDSVANF QSARGFEVID EAKSAVESVC PGVVSCADII  AVAARDASEY VGGPRYAVKV GRRDSTTAFR AIADSGDLPS FRASLDDLSD LFLRKGLNTR DLVALSGAHT LGQATCVTFK ERLYDNSSDI DAGFSSTRKR RCPANGGDTN LAPLDQVTPN 
SFDNNYYRNL MQKKGLLASD QVLFGSGAST DSIVSEYSRN PSRFASxxxA MIKMGDIQTL TGSAGQIRRI CTAVN* 

Retrieve as FASTA  
Remarks Partial or pseudogne sequence from DNA (introns 1, 2 and 3). No EST. Incorrect prediction form Phytozome: 3' end is missing, found down stream