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Entry information : CorAPx-R01
Entry ID 7726
Creation 2010-11-03 (Qiang Li)
Last sequence changes 2010-12-22 (Qiang Li)
Sequence status partial
Reviewer Christophe Dunand
Last annotation changes 2017-10-18 (Christophe Dunand)
Peroxidase information: CorAPx-R01
Name CorAPx-R01
Class Ascorbate peroxidase related    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Coleochaetophyceae Coleochaetaceae Coleochaete
Organism Coleochaete orbicularis    [TaxId: 3124 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CorAPx-R01
start..stop		 S start..stop
CscAPx-R02 298 6.91e-105 1..180 1..208
KflAPx-R02 132 3.69e-38 3..184 88..303
PpeAPx-R 128 1.66e-36 1..180 106..309
MdAPx-R 127 4.9e-36 1..180 110..313
Literature and cross-references CorAPx-R01
Literature R.Timme, C.Delwich Personal data.
Protein sequence: CorAPx-R01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   189 (320)
PWM (Da):   %s   20378.45 (34269.5)  
PI (pH):   %s   6.55 (8.69) Peptide Signal:   %s   cut: 26 range:26-345
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RGNAGALLRL AFHDAFTRDE SGGGANGSIR FELNQASAVI KQEQKVSRSL NADLYMLAGA QSRGVSTGGP KILVPLGRTD SLTVDPDNLL PERRSGVDEL RKGFRVVNFT DKDLVALSGG 
HTLGPATFDN TYFKQVKEKA AVFASDNNLG KDKGTLDYVI QFADDQQAFF DAFTEAYIKM SLIGWTLPA 

Retrieve as FASTA  
Remarks Partial sequence from EST (corb-Contig2559, contains 2 frame shifts from +2, to +1, to +2). 5' end is missing.
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGGGGAAACG CTGGTGCGCT CCTGCGGCTA GCGTTCCACG ACGCGTTCAC GCGGGACGAG TCGGGAGGAG GGGCAAACGG TTCAATCCGG TTCGAACTGA ACCAGGCCTC GGCCGTTATC  AAACAAGAGC AGAAAGTGTC CCGCTCTCTA AATGCGGATC TTTACATGCT GGCGGGTGCG CAAAGCCGTG GAGTAAGTAC AGGTGGCCCG AAGATTTTAG TTCCCCTCGG CCGCACAGAC  TCCCTCACAG TGGATCCTGA TAACCTTCTC CCTGAACGGC GATCGGGAGT GGACGAACTG AGGAAGGGCT TCAGAGTGGT TAACTTCACA GACAAAGACT TGGTGGCGCT CTCTGGTGGA  CACACGCTCG GGCCTGCCAC GTTCGACAAC ACATACTTCA AACAAGTGAA AGAGAAGGCG GCTGTCTTTG CAAGCGACAA CAACCTCGGA AAGGACAAAG GGACCTTGGA CTATGTCATC 
CAGTTTGCAG ATGATCAGCA GGCTTTCTTC GACGCTTTCA CGGAGGCATA CATCAAGATG AGCCTCATTG GTTGGACCCT TCCAGCATGA 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TGAACCCCGG AAATACGGCA CCCCGGCTGA ACAGGAGGCT CTGCGCCAGC TCGTGCACGA CGTTCTGGAC CCCATCATTG ACACGGACCC CAGTAGGAGG GGAAACGCTG GTGCGCTCCT  GCGGCTAGCG TTCCACGACG CGTTCACGCG GGACGAGTCG GGAGGAGGGG CAAACGGTTC AATCCGGTTC GAACTGAACC AGGCCTCGGC CGTTATCAAA CAAGAGCAGA AAGTGTCCCG  CTCTCTAAAT GCGGATCTTT ACATGCTGGC GGGTGCGCAA AGCCGTGGAG TAAGTACAGG TGGCCCGAAG ATTTTAGTTC CCCTCGGCCG CACAGACTCC CTCACAGTGG ATCCTGATAA  CCTTCTCCCT GAACGGCGAT CGGGAGTGGA CGAACTGAGG AAGGGCTTCA GAGTGGTTAA CTTCACAGAC AAAGACTTGG TGGCGCTCTC TGGTGGACAC ACGCTCGGGC CTGCCACGTT  CGACAACACA TACTTCAAAC AAGTGAAAGA GAAGGCGGCT GTCTTTGCAA GCGACAACAA CCTCGGAAAG GACAAAGGGA CCTTGGACTA TGTCATCCAG TTTGCAGATG ATCAGCAGGC  TTTCTTCGAC GCTTTCACGG AGGCATACAT CAAGATGAGC CTCATTGGTT GGACCCTTCC AGCATGATGG GAGCAGCTGA GAAGACGGAT CAAACAGTGA GGGATCCTAC TGCGGATCAT  GTGAAAATCT CATAGGGGAG AAGTAGGTCC CATTTAGGTT TTTGGGGTTT GGGGTGGGGT GTAGCAAAAA CTGTTCAAGT ATATACCTTT TCCAAGTGAA TGGCACCACG AAGTTTAAAC  GAGTGGAATA GGAGCGGGGA TCATGCCAAA ACACTACCTA TAGTTGTGCA TAGATTGGGT GTTGGGTTGT TAGGATTCAA GGGTCTTATG CTGGCTCCTG ACTCCAATAC ATGGCTTCTC  TCAATAGCTG AAAGAGAGCC TTCTTATTGG TTATTGCTTG CGTAGCATAG TCGGAGTTTG CGAGTTACAA GGATGGAGTT TCTGCAATTT GGGGTCGCAT GTAGCAAGCG CACAAACCAA  TGTATGATTA TCTTCATAAC CTTTTAAGTC GCTCCTATCT GCATGGACCA CTTCGACCCT TGCGTCTCTC TTGATGAGGC GTTCAGGAAG GCTAAAAAGT ACAGTGTGGT TTTTGCATCA  GACGGGAAGT TGTCGATGGT TCACAAAGAG AACAATGTTG ATAAGTGTGC CAATGAGAGA GAGAAAGAGA GAGATTGATT CAATCAACAT TGGAATTGTC TGCCGTGGCC ATAACGGGGC 
AAACCACGTT CATGTCTTTG TACG 

Retrieve as FASTA