Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
305 |
| PWM (Da): |
32150.09 |
Transmb domain: |
o303-321i442-464o484-506i676-693o |
| PI (pH): |
4.65 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
PAFTSTAFNS IGASVxIPFN STLQDDETLS SAGVRYTAPA VFSSSSSSSS STSIGPAERH GGEIATVAAE DSVERQIREA VRKVVTRAKA PGVLRLAFHD AGTYDLDTNT GGANGSILFE
LERPESNGLK RYTKVLTKAK KDLEASGVQV SWADLIAVAG AQAVEMSGGP HIGVRVGRPD ALVADEEGRM PAETFDADQV FASFAGKGFS VRETVVLLGG HTLGGKGFGD PTVFDNSYFT
VLLQRPWEAS PAMGSMIGLP SDRALLKSDD AVRWIETYAS DQQLFFDDFV AAYTKMVENG VQWST
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Retrieve as FASTA
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| Remarks |
Partial sequence from 1 EST. 5' end is missing. Strain="SKD-2004, CL-18".
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ACCAAGGTTC TCCATGCGCA ATGGGCATCA AAGATCGCAG CTGCCAAACT TCGCCAGCAG CCTCAACCAC GGCCTACCAC CGGGAAAAGA CGGCCCCTCG TGCTGAAAGC CACTCTGTAC
AACACCCGGT CCGGAATTCC CGGGAGTCTG CCACGCAAGC TGCGCACCTA CCTTGTCTTG GCCAGAATTA AATCAAGGGC CGGTTCAAGA CCTGGAGAGC CGAATTTGCG CCAGCGACAT
TGTCCCGCAC AGGTTGCTCC GCGCGCCAAC AGCACTGACA GCGGATGTAA TTCCGCGATC AGCGCATCCA GCTGGCCGCC CCGTGCGATT GGTTGTCTGC CCCCTTGTAG AACCGAGGTG
CTGACAAAAG CCAAGAAAGA TCTGGAGGCT TCTGGCGTGC AGGTGTCGTG GGCTGACCTC ATCGCGGTAG CGGGGGGCAG AGGCAGTGGA GATGAGCGGA GGGCCACACA TTGGCGTGCG
AGTTGGCCGT CCCGACGCAC TGGTGGCAGA CGAGGACGGA TGCCAGCGGA GACGTTTTGA CGCCGACCAA GTCTTTGCGA GCTTTGCTGG AAAAGGTTTC AGTGTGAGAG AGACGGTGGT
TCTACTCGGA GGTCACACGC TTGGTGGGAA AGGCTTCGGC GACCCTACTG TGTTCGACAA CTCCTACTTC ACCGTGCTGC TGCAGCGGCC GTGGGAGGCT GCTGGCTCGT CTGCTGACGC
ACGCAGCCCG GTTGCTGGCG CAGCAGGCGG CCACAGCAGT GGCATGGCGA TGAGCCCTGC AATGGGCAGC ATGATTGGTC TGCCGTCCGA CAGAGCGCTA CTGAAGAGCG ACGATGCTGT
GAGGTGGATC GAGACGTACG CATCAGACCA ACAACTCTTC TTTGACGACT TTGTTGCGGC GTACACCAAG ATGGTGGAGA ATGGGGTGCA GTGGTCGACT TGAGTCCCTC ACGGGTACAG
ACCATGTTCG GCATCGCCTT ACGCTTGCTC GTGGAAGACG ACGTATTGTG CACCAGCACA AGACCACACC ATGGCATGGA ACAAGCCACA CCGTGGCATG GTACAAGTTC TCTCTCTTCA
GGAGTTCGCG CAAAAGGGCA ACACAAAAGC TAAGCCATGT CATGCAAATG CAAAAGATTT GTGAGGCCTA GCCTTCAGTT GCAATCTTGG GGTGATATGT TGATGAGAAG ATTTGCGACT
TGGTTGCGGG TCAAAGCCTG GTTGTGAGTT CGCCTCTCAC AGTAGTTTTC TAGCCTTTGC GTGACAAGTT CCCCAAAGGA AAATACGAAT GTATCCCTTT CTTGGAATGT TAAGCAAAGT
CGCCTCAGCT CTC
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCTGCTTTCA CTTCGACGGC TTTCAACTCC ATTGGGGCTT CCGTCnGCAT TCCCTTCAAC AGCACTTTGC AAGACGACGA GACGTTGAGC AGTGCAGGTG TGCGCTACAC TGCGCCAGCT
GTCTTCAGCA GCAGCAGCAG CAGCAGCAGC AGCACAAGCA TCGGACCGGC CGAGAGGCAT GGTGGAGAAA TTGCAACGGT TGCGGCGGAG GATTCTGTGG AGCGGCAAAT ACGCGAGGCG
GTGCGAAAGG TGGTGACTCG TGCGAAGGCG CCTGGTGTGC TTCGGCTTGC TTTTCACGAC GCTGGAACGT ACGACCTTGA CACAAACACA GGCGGTGCGA ATGGCTCCAT CTTGTTTGAG
CTCGAGCGGC CAGAGAGCAA CGGCCTCAAA CGATACACCA AGGTGCTGAC AAAAGCCAAG AAGGATCTGG AGGCCTCTGG CGTGCAGGTG TCATGGGCTG ACCTCATCGC GGTAGCCGGG
GCACAGGCAG TGGAGATGAG TGGAGGCCCA CACATTGGCG TGCGAGTTGG CCGTCCTGAC GCACTGGTGG CAGACGAGGA GGGGCGCATG CCAGCGGAGA CGTTTGACGC TGACCAAGTC
TTCGCGAGCT TTGCTGGAAA AGGTTTCAGC GTGAGAGAGA CGGTGGTTCT ACTCGGAGGC CACACGCTTG GTGGGAAAGG CTTCGGCGAC CCTACTGTGT TCGATAACTC CTACTTCACC
GTGCTGCTGC AGCGGCCCTG GGAGGCGAGC CCTGCGATGG GCAGCATGAT TGGTCTGCCG TCCGACAGAG CGCTACTGAA GAGCGATGAT GCTGTGAGGT GGATCGAGAC GTACGCATCA
GACCAACAAC TCTTCTTTGA CGACTTTGTT GCGGCGTACA CCAAGATGGT GGAGAATGGG GTGCAATGGT CGACTTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGATGACGA AAGCGCTCGT CTTTCCTTTT CCTGCGCGTG CGGTCTTTCG ACCAGTCGCT CTCACAGCTG CAATCTCACA CGTGGCGAGT GATGCTGTCG CATCCAACTG CAGCTCTCTC
TTGTCTAACG AACCATCCGG CAATGGTGGC TGTCGGCGTC TCCTCCACAG CAGCAGCTGC GGCAACAGCA ACAGCAACAG CAGCATCAGC AGCAGCAGCA TCCCCCGCGT CTGCACCGAA
GTCTGCATGC CGCGCATCTT TGCCGGGCGT ATCGCAAGCG AGAGGCCAAG CGCAAnCGCA AGCGCAAGCG AAAACTGCGA GCCGGCGGAA AGCTCATCAC GGCGAAGCAA ATGAnTCGGA
GGTTGGCAAG ACACGCACAA GCTGCGCACA TCTAGGAACA GTCGCTACTG CTGCTGCCGC TGCAGCTGCG TGCnCGAACA GCAGCGAGGA TGGGCAGCAA GTGCATGCGA GTTGCGCGTG
GGCCACCACG GCGAACGTGC ACGCTGTGAG ACAGCACACA GCGGCTGTGG CGTTGGCGTG CCTCTGCTGG AACATCCCAC CTGCCGCGCT TGCGGCGCAG TTGGCGTGTG CATCGCTCAC
TCCAAGCAAT GGGACGTACT TGGTGGACGA AGCAGTTGAC TGGCAGCATG CGCAACTTGT GCCTGCTTTC ACTTCGACGG CTTTCAACTC CATTGGGGCT TCCGTCnGCA TTCCCTTCAA
CAGCACTTTG CAAGACGACG AGACGTTGAG CAGTGCAGGT GTGCGCTACA CTGCGCCAGC TGTCTTCAGC AGCAGCAGCA GCAGCAGCAG CAGCACAAGC ATCGGACCGG CCGAGAGGCA
TGGTGGAGAA ATTGCAACGG TTGCGGCGGA GGATTCTGTG GAGCGGCAAA TACGCGAGGC GGTGCGAAAG GTGGTGACTC GTGCGAAGGC GCCTGGTGTG CTTCGGCTTG CTTTTCACGA
CGCTGGAACG TACGACCTTG ACACAAACAC AGGCGGTGCG AATGGCTCCA TCTTGTTTGA GCTCGAGCGG CCAGAGAGCA ACGGCCTCAA ACGATACACC AAGGTGCTGA CAAAAGCCAA
GAAGGATCTG GAGGCCTCTG GCGTGCAGGT GTCATGGGCT GACCTCATCG CGGTAGCCGG GGCACAGGCA GTGGAGATGA GTGGAGGCCC ACACATTGGC GTGCGAGTTG GCCGTCCTGA
CGCACTGGTG GCAGACGAGG AGGGGCGCAT GCCAGCGGAG ACGTTTGACG CTGACCAAGT CTTCGCGAGC TTTGCTGGAA AAGGTTTCAG CGTGAGAGAG ACGGTGGTTC TACTCGGAGG
CCACACGCTT GGTGGGAAAG GCTTCGGCGA CCCTACTGTG TTCGATAACT CCTACTTCAC CGTGCTGCTG CAGCGGCCCT GGGAGGCGAG CCCTGCGATG GGCAGCATGA TTGGTCTGCC
GTCCGACAGA GCGCTACTGA AGAGCGATGA TGCTGTGAGG TGGATCGAGA CGTACGCATC AGACCAACAA CTCTTCTTTG ACGACTTTGT TGCGGCGTAC ACCAAGATGG TGGAGAATGG
GGTGCAATGG TCGACTTGAG TCCCTCACGG GTACAGACCA TGTTCGGCAT CGCCTTACGC TTGCTCGTGG AAGACTACGT ATTGTGCACC AGCACAGGAC CACACCATGG CATGGAACAA
GCCACACCGT GGCGTGGTAC AAGTTCTCTC TCTCCAGGAG TTCGCGCAAA AGGGCAACAC AAAAGCTAAG CCATGTCATG CAAATGCAAA AGATTTGTGA GGCCTATGAG GCCTAGCCTT
CAGTTGCAAT CTTGGGGTGA TATGTTGATG AGAAGATTTG CTACTTGGTT GCGGGTCAAA ACCTGGTTGT GAGTTCGCCT CTCACAGTAG TTTTCTAGCC TTTGCGTGAC AAGTTCCCCA
AAGGAAAATA CAAATGCATC CCTTTCTTGG AATTTTAAGC AAAGTCGCCT CAGCTACTAA TTGATGTTAA TGCCAGCAAC CCCTGTGAGT TATGGGTGTA TCACATGCAA GTGACCTCTC
GACTCTACTC ACACATACAC ACCATCACTG TAGGTGCTTG ACCTAGATTA TATCTTGAAT GCAAAGCTGT GATGCATCAT GGAGCGCATA GTGGTGGTGA CACCATCAAG CTGCCAAGTG
GTGGTCTTAA CACCAACACC ACATTCATGG AGAGCTTGAT TGTAGTGATG TTTCATGCTT TTTACATTCG AGAATGGGGC ACACATTCAT GGGAGT
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Retrieve as FASTA
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