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Entry information : LeAPx-R (Solyc08g059760.2.1[2.3])
Entry ID 5186
Creation 2007-04-13 (Christophe Dunand)
Last sequence changes 2011-07-28 (Catherine Mathe)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-22 (Messaoudi)
Peroxidase information: LeAPx-R (Solyc08g059760.2.1[2.3])
Name (synonym) LeAPx-R (Solyc08g059760.2.1[2.3])
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LeAPx-R
start..stop		 S start..stop
InAPx-R01 438 9.67e-156 51..326 67..341
IaquAPx-R01 432 1.82e-153 36..326 37..339
VvAPx-R 408 4.83e-144 16..323 14..328
GhAPx-R 398 1.13e-139 44..323 47..332
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..154 152 N° 2 246..366 119 N° 3 1268..1383 114 N° 4 1701..1771 69
N° 5 1959..2001 41 N° 6 2090..2186 95 N° 7 2552..2635 82 N° 8 4833..4954 120
N° 9 5329..5395 65 N° 10 5576..5681 104  
join(1..154,246..366,1268..1383,1701..1771,1959..2001,2090..2186,2552..2635,4833 ..4954,5329..5395,5576..5681)


exon

Literature and cross-references LeAPx-R (Solyc08g059760.2.1[2.3])
Literature Takahashi,H., Watanabe,Y., Arie,T., Ichinose,Y., Kodama,M., Ezura ,H. and Shibata,D. Full-length cDNA sequences from tomato (Solanum lycopersicum cv Micro-Tom) leaves treated with pathogens
DNA ref. GenBank:   AEKE02019264.1 (36453..30773)
Cluster/Prediction ref. UniGene:   Les.16652
Protein sequence: LeAPx-R (Solyc08g059760.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326
PWM (Da):   %s   35402.03  
PI (pH):   %s   5.52
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSNTVAVDCWLLSSGVSSFTSTSKLYFPANFSRKPRFGSNTIRASATTNGSSEGVIYKALLCGRRALLSMITLPLVMPCERIDNSVGAIAADESFQVREEIRKVLSKSKAAGVLRLVFHD
AGTFEIDEKTGGMNGSIVYELDRPENKGLKKSLKILDKAKSQIDLVQSVSWADIIALAGAEAVSLCGGPSIPIQLGRIDSMVQDPEGKLPEESLDAISLKQCFERKGFSTQELVALSGAH
TLGSKGFGNPTVFDNEYFKILMEKPWLSSGSMTSMVGLPSDRALVEDDECVGWISKYAEDQSLFFDDFKNAYTKLVDTGATWKKAL*

Retrieve as FASTA  
Remarks Complete sequence from genomic (9 introns) and 6 ESTs. Cultivar="Micro-Tom".
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTAACACCGTCGCCGTCGATTGTTGGCTTCTCAGTTCCGGCGTTTCCTCCTTTACATCCACTTCCAAGTTGTACTTTCCGGCCAATTTTTCTCGAAAGCCACGCTTTGGTAGCAAC
ACAATTCGAGCTTCCGCCACCACAAACGGTTCAAAAGTAAGCAGTTAATCTTTAATTTCATGAAATATTAGATTTTATTATCTGAAATTTGTTGATATTTGTAAATGTGAGATTTTTCGA
ATTACAGGTGAAGGTGTTATTTACAAAGCGTTATTATGTGGAAGAAGAGCCTTACTATCTATGATTACCTTGCCTCTTGTTATGCCGTGTGAAAGAATTGACAATAGTGTTGGTGCCATT
GCTGCTGAGAGTACGTTCAAATGTACTGCTTTTTAGAAATTTGTTTAGAGCTTTACTGCCTTTCGGATTTCACTTTCTTGTAAAATGAATCTTCCAAATTGTGGTGTTAATTGTCAAGAA
ATCTTATAGACAAAGATAAGTAAAACTTGCAAATAAGCATATTGGTTAACATGTAGTGTTGAAGACCATGTTCGACATTCAAAAGTTGAAGTGTTAAGTTCAGCACAATTCACATGTATT
AATTAGTTTATTTATGGATGATTCATATGTGCAAGTTCGATTTGAGAGTTCTCTCTAGCTAGTTGGGATATAGCAAAGACACTCCTTTCCAGTGATTATATATTTCTATGCCCCAATTAG
ATAATAAATTCTAAGAGAACATATGAGAGAATTTGACTTTGAAAGAGGAATGATTCTGCTCACATAAGGTGAATTTAGTTTATCATACTTCCACCGCTAGCATCAACCATTTTAGGAGTG
ATTTTTTTCCCAAAATTCGTGATTACTGATTTCCTTATTGAAGGCACTTGACCAAATGTCCTTGAAGCATATAATTTGGTAGTAGAAAGTCGAAATATGAAACATTTTGAGAGTCATCCG
TATGTGAAGAAGATAGGTAGTTACTGCTTGGACTGAAAAAAAAGCATAGAGCGATAAGCTTGGTCACCTTTTCTGCTTTGTGTTAGCAGTTTCGAGTTTGTAATTGCAGGATGAATGTGA
GGAAGTGATTCTAAGGGGAGAAGTTCCGTTTTTGTCGACCCTCTTTGATTTCACTATCGAAATTAAGATCTCAAAAAAATATGCTTGACACTGTAATTATTTGTTTCAAGTTATTTCTTT
TAAGCAATGTAAAATGTAATTACTCCATATATTCCTAAAAGGAGCACTAACTTTCCGTTTGTTTTTGGCAGTGAGAGCTTTCAGGTAAGGGAAGAGATCAGGAAGGTATTATCCAAGAGC
AAGGCTGCTGGTGTACTTCGCCTTGTATTCCATGATGCAGGAACTTTTGAAATTGATGAGAAAACTGTGGTAATACTTTGAAACGCTTAGTCCTATCCCTACCCCCCCCCCCCCCCCCAA
CTATTCCAATCATTAGCATCTTTCAATTTGTAAGCTAATCACCTTATTTTAGAATCTACAGAGCTGGTCTATAAGTGTTATAACATCATAAATGCACATGGAAATGCTTCTTACACCATT
AATTTGCAAAACCTGTATATATCTTATTTTGTATTTATCCAAAAATATAATAAATTTGTGCAGTATGCAAATATACTTGAAAGAAGAAATTGTTTTGTCTTCCATTCCTGGATACATGAT
ATCAACCTCGATTGCTCTTATATTAGGGGGTATGAATGGCTCTATAGTATATGAACTCGACAGACCCGAAAACAAAGGCCTTAAGAAATCTCTAAAGAGGTAAGTAATTTTATTGCGTAT
ACTCTTTTCTTTTGTCTCTCCATCATTAGTTTTCTTTTAACCATCCTTGGGAACAGTCCGCAGATATTCTCATTTTAAATGTTAGTTGTTTACCATTTCCAAAGACTGATGAACTCTCAT
ATGTACTTCAACCAGCTAACATCTCGGTCCATGCATTGTTCTATAGATTCTGGACAAAGCGAAGAGTCAAATTGATCTTGTGCAATCAGAGGTAAACTGTCTCAGTCAATAAACTGCTGT
TAGTTCACCTATCATTTTTGTTCCAGCATAACTTTTTTAATTGTTGGCTTTGTTCTCAGTCTCATGGGCTGATATAATAGCTTTGGCTGGAGCTGAAGCTGTTTCATTATGTGGTGGACC
TAGTATCCCCATTCAGTTGGGAAGAATTGATTCAATATGTAAGGGCTTTTTTAGTTTATGATAATGTTTACATTTTGCTATATAAGATGTTGGTCCAGTAAATGTGGAGAGAATTGCATC
TATTTTTTTATTTATGCTGTTTAGAAATGGGGATGCAAAGATTTAATAATCAGGATCTTGTGAATCTCTTAAATTTAGCAATAGACAAGTAACTTACAATCTTAATTTAAGCCCTTTGTG
GATAGTTCCTTCTCATTCAAATTGATGGCGTTTATCCATCTAAGCACCAGGTGCCAGAAACTTACCATGAGGAAACCCCTAATGTATGAAGAAACCATATTTCAATTGATTGTCGTAATT
TTCTTCCGTATCTACGTTGTCATAGTTGACTTTGACTATGTAGGGTGCAAGATCCTGAAGGAAAACTTCCTGAAGAATCACTAGATGCCATTAGCTTGAAGCAATGTTTTGAAAGGAAAG
GCTTCTCTCGTGAGTCTAATGGCTTATTTTTATTTCATCTTCTGCTCTCCTTGTGCTCCATGTTATACCATTCAATTAGCATTCTCATATTGTTTTGATGCCATTGACATAATTTGACTG
GGTTTATTTTTGTCAGTTGCTATTAGAGCAGATAAATAGATAATCTTGTTTGTACTTTTTATGTTTCCTTTGCTTTGCTTTAGTGGATAACAAAAGACTTTTAAGGGTTTTCCCCTTCAA
TAGCTTCTTCAGATGAAGTAATGAGACTTGCGATTCACAAACTGTTGCATCTTTCTTGGCATTTCTAGTGTGTTCTTCACTTGCAACATTCTGATGTTGGGTAATCAGAGGCAGATCCTG
GATTTGGAAGTCTAAGCTTTATTGATGTTTAAAAAGCAGTAGCTATAATTAATCATCAATTATGTAAACATAGACGAGCCTTGACTCATTGGTCTGTTTGAGTTTTATTAGTGATCAAGG
GTTTTCTTTCTCGACTGTACCAATTCTTTAACAATATATAGGCTCACTATATTTGTCAAAAAAACTGATCAAGCTGGACTTTTAACCGTTGCACCCCTATAATCTTCTAACCAACATTCC
AGGAAGCTCTCTTTTTTAGATTGTGGGCTTTTTGATTAGAATATGTGTAGTCCTCGATGCAGCACTAGTTTTAAAAAGTGCACCAGGCTTGGTTCTCACTCGCTTCCACGGATAGAAAAA
CCTGACTCTCCAACACTGCTACCATGTGCCCTATTGTTACTCCGGGTGCCAAGAATAGTATTTATATACATTTTCTCATACATATATACAGAGTGTCGTGGCACCCCCACACTTCTACAT
AGATCCAACCCCCGTGGGATATACATAAAGTGATAAAACTATTTCTTTCAGGTTAAGCACTTCGCCAATGAACTGGCTTTGTAGCATCAGTAATCCTTTTTAATGAAATGCAGTGTAGAC
AAACATGGTGATAAATAACGTAGTTTGTCACTGTAGCTTGCGTGGATAAATAAGATTTGGTATTCACATGGAGTAGACTTAGTTCTGTACTCTTGTTTTCGTGGAAGTGAACGACCATTA
GTTCTGCTCTATTTCATGAAGCATGTGAATTACTGCTGTATTTCTTCTGTTTCATATGCATCTGGTTTCTCTTTCTCCGGTGTTATAATGTTATGCGATTTAACATATTCTCTCACTTTC
CAAGAGCTATTTTGGATTTTCTATATGATCGTTTCCTTGTCCTTCTGAGTTTCTAATGCATGGGTATGAGACTCTCATAGTTTAGCCCCTCTATTTGGATAATGCATGCGAATACTACTT
ATACAACATGTATATCAAGAACCGAAGAATGTGGCTTTATTAGAAAATTCAATTTAATGTACGCTGTGCTAACATTTGATAAGACAAACTGTATACACTAATTCATATTTTCCTGTACCA
ATATTAATGTAGCATATAGGTTATAGTGAATTGTTAATCTCCATGACATACACAAATTTTCAAAATCATGCATAAGGAGCATATTGCACAGCCAGTGTCATCAAAAAAAGCATATTGCAC
AGCCAGTCTTTAGGAGTAATCATTTTGAACCTTAGACCTCTTGGTCTTATTCTAGGCAATATTAAGGAACTCATCTGAAATGATGGTTTTAGAGAACGAAAAAGGGATATTATTTGATCG
GTATCCTTCAAAATGGGTTTATATTAAATGTATTCAAAATTTTCAATTGCAGGTCTTTCCCCATGTATGTTTTTCTTTTTGAGGCAATCTATATTCAATATGCAGGTAAAGTGTCAGTTG
TATGATATTTTGTGAGTATTCACATGATCATGGCCAAAAGAGCAGATTTAATTGCTCCATAATCTTTCCCCTGCCTCGAGGTTATGGAATTTCAGCTTAGCTGAATAAAATTCCATAACT
CATGATTTTTTGCCTCCTCTATTGGCTGCATCAGTTCAGTACTTTGGGTTTGAGAATTCATTGACTGATAGTTTAAAAACCTAAAAAACACTTCTCAGCTTGGTATTTGGAGAGAGCAAC
TATTCAAACATTTGGCTTTTGATAATCATGGTCAGTTGTCAGAGGTCTGAGCAGTCCAGGCTTTAACTCTAAACTTATGCAGTACAACCTCTTGCTCACCTATAATTGGAAAGAAAAAGC
TAGATCTGTCTGCCTAATCTCCATGGATTGTTCATTTTGTTGGCAGAACTCAGGAACTTGTTGCCTTGTCTGGCGCGCATACTCTGGGAAGTAAAGGGTTTGGGAATCCAACTGTCTTCG
ATAATGAATATTTCAAGATTCTCATGGAAAAGCCATGGTTGTCCTCAGAGGTGACAAATGGCATTTATATGGTATCAAATGGTTATGTGTATATATATTGAATTCATTGAAATAAATAGC
AAGCAACTGAATCATCAGAACCTATGAAGCATTGATGTTCTGAAATGGAAATCCATGTACCTACATGCCTAGAGTTTAGATGATTGTTGCAGAAAACTGTCAAGCAAGATTCGGCTCAGG
ATAATCTAGGCTGCAAATTGTTTATGCTTCAGTATTTATCTGGAATGATGACTCTTTCTGATAATAGAAGGCCCCTTTTTTTAGAATTTTATTCATATGATAATGGGAATCATAAAGAAT
AATTTCCTTTTTCTTAATGTCTTTAACCATGTTGTAGCATTTTATTTCTCTTTCATCTGCACAGGCAGCATGACTAGTATGGTTGGACTTCCCTCTGATAGGGCACTTGTTGAAGATGAT
GAATGTGTAGGGGGTATGGTTTTCTTTGACCTTATGCTATTTAGATTCCTTTATTATGGTTTGGAACAACAACTCCTCCAATTTTATCCTGCTAGCTGAAAGGCAGAATTTTATTCTAGT
TTTAGTTCACAAGTTATAGTATCGTTGTTCTCAGGATTGACCTTCTTTCTAGTAATGAATTCTTCTTGAACAGATGGATATCAAAGTATGCTGAGGACCAGAGTTTATTTTTTGATGATT
TCAAGAATGCCTATACTAAACTTGTTGACACTGGTGCAACTTGGAAGAAAGCATTGTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTAACACCGTCGCCGTCGATTGTTGGCTTCTCAGTTCCGGCGTTTCCTCCTTTACATCCACTTCCAAGTTGTACTTTCCGGCCAATTTTTCTCGAAAGCCACGCTTTGGTAGCAAC
ACAATTCGAGCTTCCGCCACCACAAACGGTTCAAGTGAAGGTGTTATTTACAAAGCGTTATTATGTGGAAGAAGAGCCTTACTATCTATGATTACCTTGCCTCTTGTTATGCCGTGTGAA
AGAATTGACAATAGTGTTGGTGCCATTGCTGCTGATGAGAGCTTTCAGGTAAGGGAAGAGATCAGGAAGGTATTATCCAAGAGCAAGGCTGCTGGTGTACTTCGCCTTGTATTCCATGAT
GCAGGAACTTTTGAAATTGATGAGAAAACTGGGGGTATGAATGGCTCTATAGTATATGAACTCGACAGACCCGAAAACAAAGGCCTTAAGAAATCTCTAAAGATTCTGGACAAAGCGAAG
AGTCAAATTGATCTTGTGCAATCAGTCTCATGGGCTGATATAATAGCTTTGGCTGGAGCTGAAGCTGTTTCATTATGTGGTGGACCTAGTATCCCCATTCAGTTGGGAAGAATTGATTCA
ATGGTGCAAGATCCTGAAGGAAAACTTCCTGAAGAATCACTAGATGCCATTAGCTTGAAGCAATGTTTTGAAAGGAAAGGCTTCTCAACTCAGGAACTTGTTGCCTTGTCTGGCGCGCAT
ACTCTGGGAAGTAAAGGGTTTGGGAATCCAACTGTCTTCGATAATGAATATTTCAAGATTCTCATGGAAAAGCCATGGTTGTCCTCAGGCAGCATGACTAGTATGGTTGGACTTCCCTCT
GATAGGGCACTTGTTGAAGATGATGAATGTGTAGGATGGATATCAAAGTATGCTGAGGACCAGAGTTTATTTTTTGATGATTTCAAGAATGCCTATACTAAACTTGTTGACACTGGTGCA
ACTTGGAAGAAAGCATTGTAG

Retrieve as FASTA