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Entry information : NhyAPx04
Entry ID 7773
Creation 2010-11-25 (Qiang Li)
Last sequence changes 2010-11-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-06-12 (Qiang Li)
Peroxidase information: NhyAPx04
Name NhyAPx04
Class Ascorbate peroxidase    [Orthogroup: APx2003]
Taxonomy Eukaryota Viridiplantae Streptophyta Charophyceae Characeae Nitella
Organism Nitella hyalina    [TaxId: 181804 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NhyAPx04
start..stop		 S start..stop
SmAPx02-2_60 418 1.01e-148 6..302 3..299
SmAPx02-1_0 417 1.26e-148 6..302 3..299
AfiliAPx01 407 1.07e-144 7..302 4..290
SpraAPx03 407 2.48e-144 6..302 3..302
Literature and cross-references NhyAPx04
Literature Timme,R.E., Bachvaroff,T.R. and Delwiche,C.F. Broad phylogenomic sampling and the sister lineage of land plants. PLoS ONE 7 (1), e29696 (2012).
EST ref. GenBank:   HO495864.1  HO537290.1  HO554716.1
Protein sequence: NhyAPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   302
PWM (Da):   %s   33044.76 Transmb domain:   %s   o271-293i
PI (pH):   %s   6.18
Sequence
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Send to Peroxiscan
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MAKSYVPTVD DAYRKAIAGL KREMRAFIAE KNCAPLMLRL AWHDAGEYDV NTKTGGPNGS IRNEVEINHQ ANMGLRKAVE WCEDFKAKYP IVSYADMYQL GGVVAVEVTG GPDIDFTPGR  RDSMASPPEG RLPDANKGAP HLREVFYRMG LDDKDIVALS GGHTLGRAHK ERSGFEGPWT REPLKFDNTY FKELLEGDKE GLLQLTTDKV LVLDAAFRPY VELYAKDEEA FFRDYAISHK 
KLSELGCSET SPAFAALKHV TGGGEQANPL AILGQGLVGV AATVLICVLG YVYESKKATS KK 

Retrieve as FASTA  
Remarks Complete sequence from ESTs (HO537290.1, HO554716.1).
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGAAAT CATACGTGCC GACTGTGGAC GATGCGTACA GGAAGGCAAT AGCAGGATTG AAGAGGGAGA TGAGGGCGTT TATAGCGGAG AAGAACTGCG CGCCCTTGAT GCTGCGATTG  GCATGGCACG ACGCAGGCGA GTATGACGTC AACACTAAGA CGGGTGGTCC CAATGGGTCT ATCCGGAATG AGGTTGAGAT CAATCATCAA GCGAACATGG GCTTAAGGAA GGCAGTGGAA  TGGTGCGAGG ACTTCAAGGC TAAGTACCCG ATCGTTTCGT ACGCCGATAT GTATCAGCTG GGAGGTGTGG TTGCTGTGGA GGTCACCGGG GGTCCCGACA TTGATTTCAC CCCCGGGCGG  CGGGACTCCA TGGCCAGCCC ACCGGAGGGC CGTCTCCCTG ATGCAAACAA GGGTGCCCCC CATCTGCGGG AGGTGTTCTA TCGTATGGGC CTGGATGACA AAGACATCGT GGCGCTGTCT  GGTGGTCATA CGCTGGGGCG AGCACACAAG GAACGATCGG GATTTGAAGG CCCTTGGACT AGAGAGCCGT TGAAGTTCGA TAACACCTAT TTCAAAGAAC TTCTCGAGGG CGACAAGGAG  GGTCTTCTTC AGCTTACCAC CGATAAAGTT CTCGTCTTAG ACGCCGCCTT TCGCCCTTAC GTCGAGTTGT ACGCCAAGGA TGAAGAAGCT TTCTTTCGCG ACTATGCTAT TTCTCATAAG  AAGCTTTCGG AGCTGGGATG CTCGGAGACT TCGCCGGCTT TCGCTGCATT GAAGCATGTG ACAGGGGGCG GGGAGCAGGC CAATCCCCTG GCAATCCTTG GGCAAGGCCT GGTCGGTGTC 
GCGGCGACCG TGCTGATCTG TGTGCTAGGG TACGTGTACG AATCCAAGAA AGCCACGTCT AAAAAGTAG 

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCCTTTCTTC GCGGTGCCTG CGCGGACATT GCCTGCACGC GCGGACATTG TCGACTAAAG CCCACTCGTT CATTACAACC GGAATAGATC GGTGACGAAA GAGGAAAGAA CACAGTAATA  ATGGCGAAAT CATACGTGCC GACTGTGGAC GATGCGTACA GGAAGGCAAT AGCAGGATTG AAGAGGGAGA TGAGGGCGTT TATAGCGGAG AAGAACTGCG CGCCCTTGAT GCTGCGATTG  GCATGGCACG ACGCAGGCGA GTATGACGTC AACACTAAGA CGGGTGGTCC CAATGGGTCT ATCCGGAATG AGGTTGAGAT CAATCATCAA GCGAACATGG GCTTAAGGAA GGCAGTGGAA  TGGTGCGAGG ACTTCAAGGC TAAGTACCCG ATCGTTTCGT ACGCCGATAT GTATCAGCTG GGAGGTGTGG TTGCTGTGGA GGTCACCGGG GGTCCCGACA TTGATTTCAC CCCCGGGCGG  CGGGACTCCA TGGCCAGCCC ACCGGAGGGC CGTCTCCCTG ATGCAAACAA GGGTGCCCCC CATCTGCGGG AGGTGTTCTA TCGTATGGGC CTGGATGACA AAGACATCGT GGCGCTGTCT  GGTGGTCATA CGCTGGGGCG AGCACACAAG GAACGATCGG GATTTGAAGG CCCTTGGACT AGAGAGCCGT TGAAGTTCGA TAACACCTAT TTCAAAGAAC TTCTCGAGGG CGACAAGGAG  GGTCTTCTTC AGCTTACCAC CGATAAAGTT CTCGTCTTAG ACGCCGCCTT TCGCCCTTAC GTCGAGTTGT ACGCCAAGGA TGAAGAAGCT TTCTTTCGCG ACTATGCTAT TTCTCATAAG  AAGCTTTCGG AGCTGGGATG CTCGGAGACT TCGCCGGCTT TCGCTGCATT GAAGCATGTG ACAGGGGGCG GGGAGCAGGC CAATCCCCTG GCAATCCTTG GGCAAGGCCT GGTCGGTGTC  GCGGCGACCG TGCTGATCTG TGTGCTAGGG TACGTGTACG AATCCAAGAA AGCCACGTCT AAAAAGTAGC GGCCTATGCT TCATTAGCGA GAATACCCGG GGCTTTCATC TGTCACTACC  TTAGGCGTGC ACGAGGGGGA CCTGCTGTGG GAATGGGGAC GACTGCTTAA AATAACGATT CAATGAAAAC AGAATGCGAG GCGCAAGAGA TCGAGGAAAT GATCGAGCTA CCAGGCACAA  GGAGTACGGG AAAAAACACC ATGATTGTGC TCGCATTGTC AATCAACTCC GGCGTCGAGG CTCAGACAAA ACAGTTACGC AACTTACCGT AAGATTATCA GTGACAGCTG GACAATAGCG  GCGCGAATCT GCTTGAGTTG GGACCGATCT CGTCTCTCAT CCCTGTGCTC TTTCAGGTGG TGAGCCAGCG ATCACTTTTG ATGGCTAACT GGCAGGCTGG TTGTTAGCTG ATGTGATCGG  GGCGAGACGG TCGGAGGCCC TCTGCGCATG CCTTTTCTGT GCTGCTGCAT CATGTGGAGT TCACCTCAAA TTTGAAAGGC GAGAACTTAT GTAATTAAAA ACAAAGTTCA GAAGATTTGG 
ATTATATTTA AAAAAAAAA 

Retrieve as FASTA