View Redoxidase 7818

Entry information : BdiPrx09(Bradi1g17877 / Bradi1g17880 [3.0])

Entry ID	7818
Creation	2011-01-07 (Toky Ramarohetra)
Last sequence changes	2011-01-07 (Toky Ramarohetra)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2023-03-14 (Christophe Dunand)

Peroxidase information: BdiPrx09(Bradi1g17877 / Bradi1g17880 [3.0])

Name

BdiPrx09(Bradi1g17877 / Bradi1g17880 [3.0])

Class

Class III peroxidase [Orthogroup: Prx064]

Taxonomy

Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium

Organism

Brachypodium distachyon [TaxId: 15368 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	BdiPrx09 start..stop	S start..stop
TaPrx60-1A	485	9.3e-175	22..320	25..321
TaPrx60-1D	482	1.91e-173	27..320	30..321
AvePrx114-1B	481	5.12e-173	27..320	30..321
TaPrx60-2B	479	4.73e-172	26..320	29..321

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	14477729..14477935	205	N° 2	14477080..14477271	190	N° 3	14476411..14476974	562
complement(join(14476411..14476974,14477080..14477271,14477729..14477935))

Literature and cross-references BdiPrx09(Bradi1g17877 / Bradi1g17880 [3.0])

DNA ref.	Phytozome 12: Bd1 (14477935..14476411)

Protein sequence: BdiPrx09(Bradi1g17877 / Bradi1g17880 [3.0])

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	320 (300)
PWM (Da):	33363.03 (31390.0)
PI (pH):	8.49 (8.58)	Peptide Signal:	cut: 21 range:21-320

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MASYVLPVLLLLCVAASASASPGLSPRFYARSCPGALDTIRIAVE
EAVRNEPRMGASLLRLHFHDCFVQGCDASVLLNDTATFTGEQSAAPNVASIRGFAVIDNIKARVEAICRQTVSCADILALAARDSVVALGGPSWTVPLGRRDSTTASLSLANSDLPAPSFDVANLTAAFAAKNLSVTDMVALSG
GHTIGDSQCLNFRDRIYNETNNIDAAFATSLKSICPRSTSSGNSSLAPLDVATPTAFDNKYYGNLLAKKGLLHSDQVLVNARGGVGGLVRRYAGSPARFGKDFGAAMVRMGNVSPLTGSQ
GQIRLICSRVN*

Retrieve as FASTA

Remarks

Complete sequence from genomic (chromo 1, intron 1 and 2), no EST.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCTCTTATGTGTTGCCAGTGTTGCTGCTCCTGTGTGTAGCGGCGTCGGCGTCAGCCTCGCCTGGGCTGTCGCCGAGGTTCTATGCGAGATCGTGTCCCGGAGCTCTGGACACCATC
AGGATCGCCGTGGAGGAGGCCGTGAGGAACGAGCCCCGCATGGGGGCCTCTCTGCTCCGGCTGCACTTCCACGACTGCTTCGTCCAAGCAAGTCCCTGTCCATCATTATTTGCCATGCTT
AGTTACTTTTCTAGTACTAATACTCTTTTCTACTGCAGTTACTACTTGTTTACTCAATTTCGTTATCATTTTTCGACCAATTTAATCAAGCTGTGGTTAAATTTTAAAGTCACTATCTAA
AGTTGTTGGAATTGACACTACAAGTGTATTGTGTTTGTGTACCTAACCTAACTACTCAAAAGTTGACACCCGGAGACTCAAGTCCAAGGCCTTCTAATTTGACTCTTTAAAGTCTTCTTG
GCGCCAATTGCAACCAACCAAATCTGTTACTAGTATCACAGAAAAATTATTACTGCTCTCTGCATCTCTTGTGAAAAAAATATTACTCCTACTACTGTTTACATATTTTGTTTAACTACC
CAGTAGTAGCGGTTAATAATTGTGTGCTAATTAAGTGTGGAACTGGAAATGCATATCAAATCAGGGGGCTGCGACGCATCGGTGCTGCTGAATGACACGGCCACCTTCACCGGCGAGCAA
AGCGCTGCTCCCAACGTGGCGTCCATCCGAGGCTTCGCCGTCATCGACAACATCAAGGCCCGTGTCGAGGCCATCTGCCGGCAGACCGTCTCCTGCGCCGACATCCTTGCCCTCGCCGCC
CGCGACTCCGTCGTCGCCGTAATTCCCCCCTCCTCCTCCTCCTCATCACCATTCTTGCACACTTGCACTACACAATCACTTCACTCAATATCAACACGTTTAATCACTTGCATTGCATTG
CAGCTCTGGGAGGCCCATCATGGACAGTCCCACTAGGCCGCCGGGACTCAACAACAGCAAGTCTCTCCCTAGCCAACAGCGACCTCCCAGCTCCATCCTTCGACGTGGCCAACCTGACAG
CCGCCTTCGCCGCCAAGAACCTCAGCGTGACCGACATGGTGGCCCTCTCAGGCGGCCACACAATCGGGGACTCGCAGTGCCTCAACTTCAGGGACAGGATCTACAACGAGACCAACAACA
TCGACGCCGCCTTCGCGACGTCGCTCAAATCCATCTGCCCGCGCTCCACGAGCTCCGGCAACAGCAGCCTGGCGCCTCTGGACGTAGCAACGCCCACAGCATTCGACAACAAGTACTATG
GGAACTTGTTGGCGAAGAAGGGGCTCTTGCATTCGGACCAGGTGCTGGTGAATGCCAGAGGCGGCGTTGGCGGGCTTGTCAGGAGGTATGCGGGCTCCCCTGCGAGGTTTGGGAAGGATT
TTGGGGCTGCCATGGTGAGGATGGGGAATGTGAGCCCGCTCACTGGGTCGCAGGGCCAGATCAGGCTCATTTGTTCCAGGGTTAACTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCTCTT ATGTGTTGCC AGTGTTGCTG CTCCTGTGTG TAGCGGCGTC GGCGTCAGCC TCGCCTGGGC TGTCGCCGAG GTTCTATGCG AGATCGTGTC CCGGAGCTCT GGACACCATC AGGATCGCCG TGGAGGAGGC CGTGAGGAAC GAGCCCCGCA TGGGGGCCTC TCTGCTCCGG CTGCACTTCC ACGACTGCTT CGTCCAAGGC TGCGACGCAT CGGTGCTGCT GAATGACACG GCCACCTTCA CCGGCGAGCA AAGCGCTGCT CCCAACGTGG CGTCCATCCG AGGCTTCGCC GTCATCGACA ACATCAAGGC CCGTGTCGAG GCCATCTGCC GGCAGACCGT CTCCTGCGCC GACATCCTTG CCCTCGCCGC CCGCGACTCC GTCGTCGCCC TGGGAGGCCC ATCATGGACA GTCCCACTAG GCCGCCGGGA CTCAACAACA GCAAGTCTCT CCCTAGCCAA CAGCGACCTC CCAGCTCCAT CCTTCGACGT GGCCAACCTG ACAGCCGCCT TCGCCGCCAA GAACCTCAGC GTGACCGACA TGGTGGCCCT CTCAGGCGGC CACACAATCG GGGACTCGCA GTGCCTCAAC TTCAGGGACA GGATCTACAA CGAGACCAAC AACATCGACG CCGCCTTCGC GACGTCGCTC AAATCCATCT GCCCGCGCTC CACGAGCTCC GGCAACAGCA GCCTGGCGCC TCTGGACGTA GCAACGCCCA CAGCATTCGA CAACAAGTAC TATGGGAACT TGTTGGCGAA GAAGGGGCTC TTGCATTCGG ACCAGGTGCT GGTGAATGCC AGAGGCGGCG TTGGCGGGCT TGTCAGGAGG TATGCGGGCT CCCCTGCGAG GTTTGGGAAG GATTTTGGGG CTGCCATGGT GAGGATGGGG AATGTGAGCC CGCTCACTGG GTCGCAGGGC CAGATCAGGC TCATTTGTTC CAGGGTTAAC TGATTCAGTT GTGGTACTGG CTGGTTAACT TTGTTCATGA ATGTAAGATG TTTTGATATG CTATTTTTAG CCTACCCAAA CGTCTTACAT TTTGCATGGA ATAAAGCTAG TATTAGCTAT
AGCTACTGCT ATGTATCATG TACTGTGATG TATGAGAGCA TTCCGCTCAA AATTTGCCCA GATGTTCAAA TGCCATTCAA AAAAATTTGT TTCAAATTTG CCACTCAAA

Retrieve as FASTA