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Entry information : BdiPrx89 (Bradi2g38700)
Entry ID 7868
Creation 2011-01-14 (Toky Ramarohetra)
Last sequence changes 2011-01-14 (Toky Ramarohetra)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2014-01-16 (Qiang Li)
Peroxidase information: BdiPrx89 (Bradi2g38700)
Name (synonym) BdiPrx89 (Bradi2g38700)
Class Class III peroxidase    [Orthogroup: Prx139]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Brachypodium
Organism Brachypodium distachyon    [TaxId: 15368 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BdiPrx89
start..stop		 S start..stop
BdiPrx85 380 7.31e-133 28..324 27..319
BdiPrx87 362 7.23e-126 1..326 1..322
BdiPrx86 356 1.17e-123 26..325 24..316
BdiPrx90 285 3.86e-95 7..325 3..348
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '7868' 'join(38979788..38979991,38980374..38981159)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 38979788..38979991 202 N° 2 38980374..38981159 784  
join(38979788..38979991,38980374..38981159)


exon

Literature and cross-references BdiPrx89 (Bradi2g38700)
DNA ref. Phytozome 12:   Bd2 (38979788..38981159)
Protein sequence: BdiPrx89 (Bradi2g38700)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (297)
PWM (Da):   %s   34843.01 (31739.2) Transmb domain:   %s   i9-27o
PI (pH):   %s   7.45 (6.67) Peptide Signal:   %s   cut: 33 range:33-329
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAKSGEKGSVLVLVAFAAAILLLGAQVKPAVADGYNTDIEGKVRG
IVNARIYDAPGLIRLVFHDCWVKGCDASVLLKRADGLAEMDAVQNGGLRGLDVIQAIKDALTKDYPAVTCADAVVYAAREACYILSYGKIAYPVDGPGYHKDAVGSFKDDAAALPPPFGPSSSFKNLTKNFGGKPGFGAGDLV
ILSGAHAVGLAHRPAFVDRLDLQVAARGEIDVLYQKKIDQVSNASPAKAIHNNVRDIDQPETVPGVLDNSYYAANLGKKVLFNSDWALITDPAARGQMERFEKFPGDWYDLFGKAMAKLS
RLPAEGPTLSVPRARCDGTSY*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 2, intron 1), no EST. Missing 'c'.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAAGAGCGGCGAAAAGGGGTCTGTTTTGGTGCTCGTGGCCTTTGCCGCTGCCATCCTCCTCCTGGGCGCGCAGGTGAAGCCGGCTGTTGCTGATGGCTATAACACCGATATAGAG
GGCAAGGTGAGGGGTATAGTGAATGCCAGAATCTACGACGCCCCTGGACTCATCCGGCTCGTGTTCCACGACTGCTGGGTAAAGAGGTAACAATTATTCAAACAGCCACTCTTGATATTG
CAGTTATTTAGTGCTCATGTTTCTCTTTTTCGGTGGTAAAGTAATCAGGGGCATTTTGTTACATTTGCAAATGTTTCCGGCAATCATGGGTACATGAACATATGTAGCAAAATGAAACAG
GGTGTGGTTTTATCTCAGCCGTCAGATTTTTAAGTATAAATCTCAGTTGACGCATCAGAACTGTTGGATTAAAATCTGATTGCCATCATAATTTTTCCTTCTCTCACATGCTGCCGTTGG
ATTAAGATTTGATGGTCAAAAAGTCGACTGATTTTCTAATTAAAAGACAAGTAACTTCTCATCAGCAAAAAACAGAATGAAATAACACATTCGTACGGTTTGTATCAGGGTTGCGATGCA
TCCGTGTTGCTGAAGAGAGCTGATGGGCTGGCAGAGATGGACGCGGTCCAGAACGGCGGACTCCGGGGCCTGGACGTGATCCAGGCCATCAAGGACGCGCTCACCAAGGACTACCCGGCC
GTCACCTGCGCCGACGCAGTTGTCTACGCGGCGCGCGAGGCGTGCTACATCCTTAGCTACGGCAAGATCGCGTACCCCGTGGACGGGCCGGGCTACCACAAGGACGCCGTCGGCTCGTTC
AAGGACGACGCGGCGGCGCTCCCGCCGCCCTTCGGACCCTCGTCCAGCTTCAAGAACCTCACCAAGAACTTCGGCGGCAAGCCGGGCTTCGGTGCCGGTGATCTCGTAATCCTCTCTGGC
GCGCACGCCGTCGGCCTGGCCCACCGCCCGGCCTTTGTAGACCGCCTGGACCTGCAGGTCGCGGCCCGTGGCGAGATCGACGTCCTTTACCAGAAAAAGATCGATCAGGTGTCGAATGCA
AGCCCGGCGAAGGCGATCCACAACAACGTCCGCGACATCGACCAACCTGAGACGGTGCCTGGCGTCCTGGACAACAGCTACTACGCCGCCAACCTCGGTAAGAAGGTGCTCTTCAACTCC
GACTGGGCGCTCATCACGGACCCGGCCGCGCGGGGACAAATGGAAAGGTTCGAGAAATTCCCCGGCGACTGGTACGACCTCTTCGGCAAGGCAATGGCCAAGCTCAGCAGGCTCCCTGCC
GAGGGCCCCACTCTCAGTGTGCCCAGGGCGAGATGCGATGGCACCAGCTACTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAAGAGCGGCGAAAAGGGGTCTGTTTTGGTGCTCGTGGCCTTTGCCGCTGCCATCCTCCTCCTGGGCGCGCAGGTGAAGCCGGCTGTTGCTGATGGCTATAACACCGATATAGAG
GGCAAGGTGAGGGGTATAGTGAATGCCAGAATCTACGACGCCCCTGGACTCATCCGGCTCGTGTTCCACGACTGCTGGGTAAAGGGTTGCGATGCATCCGTGTTGCTGAAGAGAGCTGAT
GGGCTGGCAGAGATGGACGCGGTCCAGAACGGCGGACTCCGGGGCCTGGACGTGATCCAGGCCATCAAGGACGCGCTCACCAAGGACTACCCGGCCGTCACCTGCGCCGACGCAGTTGTC
TACGCGGCGCGCGAGGCGTGCTACATCCTTAGCTACGGCAAGATCGCGTACCCCGTGGACGGGCCGGGCTACCACAAGGACGCCGTCGGCTCGTTCAAGGACGACGCGGCGGCGCTCCCG
CCGCCCTTCGGACCCTCGTCCAGCTTCAAGAACCTCACCAAGAACTTCGGCGGCAAGCCGGGCTTCGGTGCCGGTGATCTCGTAATCCTCTCTGGCGCGCACGCCGTCGGCCTGGCCCAC
CGCCCGGCCTTTGTAGACCGCCTGGACCTGCAGGTCGCGGCCCGTGGCGAGATCGACGTCCTTTACCAGAAAAAGATCGATCAGGTGTCGAATGCAAGCCCGGCGAAGGCGATCCACAAC
AACGTCCGCGACATCGACCAACCTGAGACGGTGCCTGGCGTCCTGGACAACAGCTACTACGCCGCCAACCTCGGTAAGAAGGTGCTCTTCAACTCCGACTGGGCGCTCATCACGGACCCG
GCCGCGCGGGGACAAATGGAAAGGTTCGAGAAATTCCCCGGCGACTGGTACGACCTCTTCGGCAAGGCAATGGCCAAGCTCAGCAGGCTCCCTGCCGAGGGCCCCACTCTCAGTGTGCCC
AGGGCGAGATGCGATGGCACCAGCTACTAG

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGAAGA GCGGCGAAAA GGGGTCTGTT TTGGTGCTCG TGGCCTTTGC CGCTGCCATC CTCCTCCTGG GCGCGCAGGT GAAGCCGGCT GTTGCTGATG GCTATAACAC CGATATAGAG  GGCAAGGTGA GGGGTATAGT GAATGCCAGA ATCTACGACG CCCCTGGACT CATCCGGCTC GTGTTCCACG ACTGCTGGGT AAAGGGTTGC GATGCATCCG TGTTGCTGAA GAGAGCTGAT  GGGCTGGCAG AGATGGACGC GGTCCAGAAC GGCGGACTCC GGGGCCTGGA CGTGATCCAG GCCATCAAGG ACGCGCTCAC CAAGGACTAC CCGGCCGTCA CCTGCGCCGA CGCAGTTGTC  TACGCGGCGC GCGAGGCGTG CTACATCCTT AGCTACGGCA AGATCGCGTA CCCCGTGGAC GGGCCGGGCT ACCACAAGGA CGCCGTCGGC TCGTTCAAGG ACGACGCGGC GGCGCTCCCG  CCGCCCTTCG GACCCTCGTC CAGCTTCAAG AACCTCACCA AGAACTTCGG CGGCAAGCCG GGCTTCGGTG CCGGTGATCT CGTAATCCTC TCTGGCGCGC ACGCCGTCGG CCTGGCCCAC  CGCCCGGCCT TTGTAGACCG CCTGGACCTG CAGGTCGCGG CCCGTGGCGA GATCGACGTC CTTTACCAGA AAAAGATCGA TCAGGTGTCG AATGCAAGCC CGGCGAAGGC GATCCACAAC  AACGTCCGCG ACATCGACCA ACCTGAGACG GTGCCTGGCG TCCTGGACAA CAGCTACTAC GCCGCCAACC TCGGTAAGAA GGTGCTCTTC AACTCCGACT GGGCGCTCAT CACGGACCCG  GCCGCGCGGG GACAAATGGA AAGGTTCGAG AAATTCCCCG GCGACTGGTA CGACCTCTTC GGCAAGGCAA TGGCCAAGCT CAGCAGGCTC CCTGCCGAGG GCCCCACTCT CAGTGTGCCC  AGGGCGAGAT GCGATGGCAC CAGCTACTAG GAGAGATCCA ACGACACGTA CGCACGGCCC GCCCAAGCGC CAACATTTGA ACAAGACATG CATTGCTTGC ATGCACATTG ATTTATTCGT  TACTTTACCT ATCATGTTTG TCAATTATTG TTTAATTTAC TTATGCTAGT ACTAATAATT GTACCTTTTT TTGCTTGCCC TGCTTTTGTA ATACATATGC ATGTTCTGAA AGTTATGTTG 
TCCTACATAT GTAATCCACG CCGTAAACGC TTTGAAATAA CATGACCATT CAATTTGCCT TTTGGAA 

Retrieve as FASTA