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Entry information : PpaKat04
Entry ID 7964
Creation 2011-02-02 (Christophe Dunand)
Last sequence changes 2011-02-02 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-02-02 (Christophe Dunand)
Peroxidase information: PpaKat04
Name PpaKat04
Class Catalase    [Orthogroup: Kat001]
Taxonomy Eukaryota Viridiplantae Streptophyta Funariaceae Physcomitrella
Organism Physcomitrella patens    [TaxId: 3218 ]
Cellular localisation N/D
Tissue types Gametophore
Protonema
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PpaKat04
start..stop		 S start..stop
PpaKat05 921 0 42..534 21..513
PpaKat03 907 0 57..534 9..486
MpKat02 870 0 1..534 63..601
MpalKat02 862 0 1..534 66..604
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2750918..2751093 174 N° 2 2751205..2751348 142 N° 3 2751476..2751794 317 N° 4 2751908..2752225 316
N° 5 2752349..2752561 211 N° 6 2752762..2752922 159 N° 7 2753056..2753329 272  
join(2750918..2751093,2751205..2751348,2751476..2751794,2751908..2752225,2752349 ..2752561,2752762..2752922,2753056..2753329)


exon

Literature and cross-references PpaKat04
DNA ref. Phytozome 12:   scaffold_3 (2750918..2753329)
Cluster/Prediction ref. UniGene:   Ppa.9433
Protein sequence: PpaKat04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   534
PWM (Da):   %s   60249.67  
PI (pH):   %s   6.83
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPGFLNYVGHTIFRFGGGGDGNGKSGATEDDEPLRLGHSGEPLYTTLGGHPVSDDNNSVTVGESGTLTFEDLHLFEKNAHFNRERIPERVVHAKGAGAHGYFEVTHDVTDLCKAKLFDE
VGKKTPVFARFSTVTGESGFPDTARDPRGFALKFYTEEGNWDMVGNNTPVFFVRDALKFPDLIHSQKRNPQTHMKDPNAFWDFLSLVPESLHVLITFSPRGVPDGHRHMHGYGSHTYKWI
NKEGKAHWVKFHFISDQGIKNLTHERAVELAGINPDYSTEDLFQNIQKGNGPSWTFKVQVMPLEDAASYRYDPFDLTKVWPHKDYPLREVGKLKLDRNPTNHFAEVEQSSFSPAHMVPGI
EASPDRVLQARLFAYDDAGRYRLGSNHLQIPINQCPFARVQNYSRDGLMTVTENGGSKPNYYPNSFPDLPRPDASQPDVHPYKHEGGIVSRTPPRKWSMQDDYEQPRALWQTMSKEDQGQ
TAKNIAGHIQGAQEFIIQRQMGIFKRCDPSLAQKVEEMLEMKRKSQDPYTMVA

Retrieve as FASTA  
Remarks Complete sequence from genomic (6 introns) and 12 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCCAGGCTTCTTGAATTATGTTGGACACACAATCTTTCGCTTTGGAGGGGGTGGAGATGGCAATGGTAAAAGTGGGGCAACCGAGGATGACGAGCCTCTCCGCTTAGGCCACAGT
GGAGAGCCATTATACACCACGTTGGGCGGCCACCCTGTTTCCGACGACAATAATAGAGGTATTCATTCCCCTCGATCAGTCACGACATATGGCAAGCTCGGGTGTAGAGGTTTATGGAGA
GATTTATCAAGTTTTTTACTGACAATTTGCTGTTGGCATTGTGTCTCAGTGTCACAGTTGGTGAGAGCGGAACCCTGACGTTTGAAGATCTGCATTTGTTCGAAAAGAATGCGCATTTCA
ACCGCGAGCGCATTCCTGAGCGTGTGGTGCATGCTAAGGGAGCTGGTGCTCACGGTTACTTTGAAGTGACACACAGTACGTAATCAATCAGTCAAATCCATACTGAATCCTGTCAAGCGT
ATTGTGGATTGGCAAAGAAGTGGGGGTTGTTTTGAGGAAACCAGAGATGCTGACGAATTGTTTGTTACTGTTTTGTCTCCAGCGACGTGACTGATCTTTGCAAGGCGAAACTCTTTGATG
AAGTGGGTAAGAAGACGCCCGTGTTTGCTCGATTTTCCACCGTGACTGGTGAGAGTGGGTTTCCGGATACTGCCAGGGATCCTCGTGGGTTCGCTCTCAAGTTTTACACCGAGGAAGGTA
ACTGGGACATGGTGGGAAACAACACGCCGGTCTTCTTCGTCCGCGACGCCTTGAAGTTTCCCGACCTCATCCACTCCCAGAAGCGTAACCCGCAGACTCACATGAAGGATCCCAATGCAT
TCTGGGACTTTCTGAGCCTGGTTCCTGAATCTTTGCACCAGAGGTTAGACCTCTCCAATCTGACTCATCCTTCCTCAGCTCCATTGCTCAAGGTCACGAGTTTCATTCTTGCCTCAATTC
GATCGAATCTGAACGTCTTGAGTTCTGCTTCCATAGGTTTTAATTACTTTCTCGCCGAGGGGGGTTCCCGACGGCCATCGCCACATGCACGGCTATGGCTCTCATACATACAAGTGGATA
AACAAGGAAGGAAAAGCTCACTGGGTCAAGTTTCATTTCATTAGCGATCAAGGCATCAAGAATCTCACTCACGAGCGCGCTGTTGAGCTTGCGGGGATCAATCCAGACTACTCCACAGAG
GATCTGTTCCAGAACATTCAGAAGGGTAATGGCCCATCGTGGACATTCAAAGTGCAAGTCATGCCTCTTGAGGATGCTGCGTCGTACCGATACGACCCGTTTGATTTGACGAAGAGGTGT
GTAGTAAAACATTTTAGTGGCGTTTTTGTGTACAATAACTGCGAGTTCTTGAGAATTTTCGACGGTGTCGCGAGATGTCTGCGTGTCGAATTTGACAAGCAGTTAGTATGTTGGCGCAGG
TTTGGCCTCACAAGGATTACCCACTGCGCGAAGTAGGGAAGTTGAAGCTTGATAGAAATCCAACCAACCACTTCGCTGAGGTCGAGCAATCATCTTTCTCGCCTGCACATATGGTTCCTG
GAATTGAAGCATCACCAGACCGCGTTCTCCAGGCTCGTCTTTTCGCTTACGATGATGCTGGTCGCTATCGCCTGGGCTCAAATCACTTGCAAAAGTATGACCTCTTCTGAGTCTATCACT
CAAAGACTGAACAAAGATTGTTCACATATATTTGCCGTTAGTCTTTTGCCCATCTTTGTAGTAGTTCCATGCCTACTATCCCTGCGTTGACAATAGCGTGCATTTAGAAATTTACAGTTG
TTTCCAGCCACAGTTTTGGTTGTGACTGAGATTCGTTGCCTCTGCGGCTGACAGATTCCGATCAACCAGTGCCCATTTGCGAGAGTGCAAAACTATTCTCGTGATGGGCTAATGACTGTT
ACTGAGAACGGTGGCAGCAAGCCGAACTATTACCCCAACTCATTTCCAGATTTGCCGCGGCCCGATGCTTCTCAGCCTGACGTGCATCCTTACAAAAGTAGGTCCTCAAGCCATTTCAGG
GTTTGCATTGATAAAATTGGAGATTCTTTTCTGCTACTGTTTAGGTTCGTCTTGACAGTTAAAAAAAAATTGTTCGCTTTGTGCTCACGGAATCATCTCTCCATGTGCAGGCATGAAGGA
GGAATTGTTTCAAGAACCCCACCCCGAAAGTGGTCGATGCAGGATGATTATGAGCAACCTCGGGCTCTTTGGCAGACCATGTCTAAGGAAGATCAGGGGCAGACTGCCAAAAACATCGCT
GGCCACATACAAGGGGCTCAAGAGTTTATCATTCAGCGCCAAATGGGTATATTTAAGCGCTGTGACCCTAGCCTTGCTCAAAAAGTGGAAGAAATGCTGGAAATGAAGAGAAAATCTCAA
GACCCTTACACCATGGTAGCGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCGCCAGGCTTCTTGAATTATGTTGGACACACAATCTTTCGCTTTGGAGGGGGTGGAGATGGCAATGGTAAAAGTGGGGCAACCGAGGATGACGAGCCTCTCCGCTTAGGCCACAGT
GGAGAGCCATTATACACCACGTTGGGCGGCCACCCTGTTTCCGACGACAATAATAGTGTCACAGTTGGTGAGAGCGGAACCCTGACGTTTGAAGATCTGCATTTGTTCGAAAAGAATGCG
CATTTCAACCGCGAGCGCATTCCTGAGCGTGTGGTGCATGCTAAGGGAGCTGGTGCTCACGGTTACTTTGAAGTGACACACGACGTGACTGATCTTTGCAAGGCGAAACTCTTTGATGAA
GTGGGTAAGAAGACGCCCGTGTTTGCTCGATTTTCCACCGTGACTGGTGAGAGTGGGTTTCCGGATACTGCCAGGGATCCTCGTGGGTTCGCTCTCAAGTTTTACACCGAGGAAGGTAAC
TGGGACATGGTGGGAAACAACACGCCGGTCTTCTTCGTCCGCGACGCCTTGAAGTTTCCCGACCTCATCCACTCCCAGAAGCGTAACCCGCAGACTCACATGAAGGATCCCAATGCATTC
TGGGACTTTCTGAGCCTGGTTCCTGAATCTTTGCACCAGGTTTTAATTACTTTCTCGCCGAGGGGGGTTCCCGACGGCCATCGCCACATGCACGGCTATGGCTCTCATACATACAAGTGG
ATAAACAAGGAAGGAAAAGCTCACTGGGTCAAGTTTCATTTCATTAGCGATCAAGGCATCAAGAATCTCACTCACGAGCGCGCTGTTGAGCTTGCGGGGATCAATCCAGACTACTCCACA
GAGGATCTGTTCCAGAACATTCAGAAGGGTAATGGCCCATCGTGGACATTCAAAGTGCAAGTCATGCCTCTTGAGGATGCTGCGTCGTACCGATACGACCCGTTTGATTTGACGAAGGTT
TGGCCTCACAAGGATTACCCACTGCGCGAAGTAGGGAAGTTGAAGCTTGATAGAAATCCAACCAACCACTTCGCTGAGGTCGAGCAATCATCTTTCTCGCCTGCACATATGGTTCCTGGA
ATTGAAGCATCACCAGACCGCGTTCTCCAGGCTCGTCTTTTCGCTTACGATGATGCTGGTCGCTATCGCCTGGGCTCAAATCACTTGCAAATTCCGATCAACCAGTGCCCATTTGCGAGA
GTGCAAAACTATTCTCGTGATGGGCTAATGACTGTTACTGAGAACGGTGGCAGCAAGCCGAACTATTACCCCAACTCATTTCCAGATTTGCCGCGGCCCGATGCTTCTCAGCCTGACGTG
CATCCTTACAAGCATGAAGGAGGAATTGTTTCAAGAACCCCACCCCGAAAGTGGTCGATGCAGGATGATTATGAGCAACCTCGGGCTCTTTGGCAGACCATGTCTAAGGAAGATCAGGGG
CAGACTGCCAAAAACATCGCTGGCCACATACAAGGGGCTCAAGAGTTTATCATTCAGCGCCAAATGGGTATATTTAAGCGCTGTGACCCTAGCCTTGCTCAAAAAGTGGAAGAAATGCTG
GAAATGAAGAGAAAATCTCAAGACCCTTACACCATGGTAGCGTGA

Retrieve as FASTA