Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
327 (300) |
PWM (Da): |
35714.68 (32709.1) |
|
PI (pH): |
8.67 (8.86) |
Peptide Signal: |
cut: 28 range:28-327 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MACPKLLLSCLLLQLMFFFLVPEVAQGHGLKVGFYQKACPNAEAI VKEVIGQVLSIDPSLSGPILRLHFHDCFVRGCEGSVLLESPTYQSEKYAIRKLGLRGYQEIDRVKTALEKACPGIVSCADILALVTRDIVVATGGLFYDVETGRRDGYVSILEEARRDLIPPSTNITTLKADFAKRGLSAKDLVVLSGGH TIGNSHCAAFSNRLYNFTGKGDADPTLDSNYIARLKLSCKPNDQTTLVEMDPGSARTFDIKYFDLILKRRGLFTSDAALLDDKQTKAYLDFQIKTGGSTFFKDFGVSMVKMGRIGVLTKT AGEVRKVCTKVN |
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (chromo3, 3 introns). No prediction from Phytozome. |
DNA ►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTGTCCAAAGCTCCTCTTGTCTTGTTTGTTGCTTCAATTGATGTTCTTTTTTCTTGTCCCTGAGGTTGCTCAAGGTCACGGTCTCAAAGTAGGGTTTTACCAGAAGGCGTGCCCA AACGCAGAGGCCATCGTGAAGGAAGTCATCGGCCAAGTCTTGTCCATCGATCCGAGTCTCTCCGGCCCTATTTTGAGGCTGCACTTTCACGATTGCTTCGTTAGGGGGTAAGTAAGAGAG CGAGCTCTCATGCTCCTCTTCCCACTACGCGTTTGAAGTTTTACCATTTTCTTATAACTTGACTAGTTGCATGTAACTAAAGTTCGGATTCTAAGATGAGTAGTAATTGGCAAAAAAAAA AAAAAAAAAAGAGGGTGAGAAGTTAGAACCTGGGCTTTCATCTGAAGGGGTAAAGCATGGCAGGGATGCATCAAGATTTACAAAATTGGCTTACCTGATAACAATATGATAAAATGGAAA ATGGGTATTAGAACTAGTAATACCAGTAAATGGTATTCAGCTCTCAACATACTTCGCTAGATTCGTCCATGGTTGCGAACTATTGTTTTCATGAACTCTCGGTTGAATGATGCTTTGTTC TGGGCTTTTCCACAGGGCTGTGAAGGTTCGGTGCTACTGGAATCCCCGACCTATCAATCCGAGAAGTACGCGATTCGGAAGCTTGGCCTTCGAGGTTACCAAGAGATTGATAGAGTCAAA ACAGCGTTGGAGAAGGCATGCCCTGGCATCGTTTCGTGTGCTGACATCTTGGCCCTTGTCACTAGAGATATTGTCGTCGCGCGGTGCGCATATTCATAAATCATCTCCTCAATATTTTGT CCTCAATTTGATTGTGGAAAGCAAATTTTGGCCACACATATCATAGAGGATAAGTACCCACAATTTATTTATTTTTTTTAATGAGAAAAACATTTTTATATAGATATTGGGTTGTTTTTT CTTGTGTTGTCACTTTAGACCGGAGCACTTTTCTATGATTGGCCACACATATCATAGAGGATAAGTACCCACAATTTTTTTTTTTGAATGAGAAAAACATTTTTATATAGATATTGGAGT TTTTTGTTTCTTGTGTTGTCGCTTTAGACCGGAGCACTTTTCTATGATTGGCCACACGTATCATAGAGGATAAGTACCCACAATTTTTATTTTTTTTGAATGAGAAAAACATTTTTATAT AGATATTGGAGTTTTTGGTTTCTTGTGTTGTCGCTTTAAACCGGAGCACTTTTCTATGATTGGCCACACGTATCATAGAGGATAAGTACCCACAATTTATTTATTTATTTTTTTAATGAG AAAAACATTTTTATATAGATATTGGAGTTTTTTGTTTCTTGTGTTGTCGCTTTAGACCGGAGGACTTTTCTATGATGTGGAAACCGGACGAAGAGATGGGTACGTTTCTATTTTGGAGGA GGCACGTAGGGATTTAATACCACCATCGACCAACATTACAACTCTGAAAGCAGATTTTGCAAAGAGAGGCCTTAGTGCAAAGGACCTTGTTGTCCTATCAGAGGTAATACATAATCTCCA ATTACTGCTTCACATGCTTTGTCAAATATTTTGGAGAAATTAACGTAAGTTTATCAAGAAAAAGACCGTCATTGGAGCACGAGATACATGAACGTAATCAGCGGCACAGGGAGAAAATGT GATTTGTAACGTTAGATCAATGCCAATTCCAATTTCCAATTGACCAGGTGGGCACACCATTGGAAATTCACACTGCGCTGCCTTCTCCAACCGCCTCTACAACTTCACCGGAAAGGGCGA CGCCGACCCCACGCTCGACTCCAACTATATAGCAAGACTAAAGCTCAGTTGCAAGCCGAATGACCAAACCACTCTTGTCGAGATGGACCCGGGAAGTGCGAGAACGTTCGACATCAAATA CTTCGATCTCATCCTGAAGAGAAGAGGGCTCTTCACTTCGGACGCTGCACTTCTCGATGACAAACAAACCAAGGCGTACCTTGACTTCCAGATCAAGACCGGTGGATCCACTTTCTTCAA GGACTTTGGAGTGTCGATGGTGAAAATGGGTCGAATTGGCGTGCTCACCAAAACGGCTGGTGAAGTTAGAAAAGTGTGTACAAAGGTTAATTAA |
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCTTGTCCAAAGCTCCTCTTGTCTTGTTTGTTGCTTCAATTGATGTTCTTTTTTCTTGTCCCTGAGGTTGCTCAAGGTCACGGTCTCAAAGTAGGGTTTTACCAGAAGGCGTGCCCA AACGCAGAGGCCATCGTGAAGGAAGTCATCGGCCAAGTCTTGTCCATCGATCCGAGTCTCTCCGGCCCTATTTTGAGGCTGCACTTTCACGATTGCTTCGTTAGGGGCTGTGAAGGTTCG GTGCTACTGGAATCCCCGACCTATCAATCCGAGAAGTACGCGATTCGGAAGCTTGGCCTTCGAGGTTACCAAGAGATTGATAGAGTCAAAACAGCGTTGGAGAAGGCATGCCCTGGCATC GTTTCGTGTGCTGACATCTTGGCCCTTGTCACTAGAGATATTGTCGTCGCGACCGGAGGACTTTTCTATGATGTGGAAACCGGACGAAGAGATGGGTACGTTTCTATTTTGGAGGAGGCA CGTAGGGATTTAATACCACCATCGACCAACATTACAACTCTGAAAGCAGATTTTGCAAAGAGAGGCCTTAGTGCAAAGGACCTTGTTGTCCTATCAGGTGGGCACACCATTGGAAATTCA CACTGCGCTGCCTTCTCCAACCGCCTCTACAACTTCACCGGAAAGGGCGACGCCGACCCCACGCTCGACTCCAACTATATAGCAAGACTAAAGCTCAGTTGCAAGCCGAATGACCAAACC ACTCTTGTCGAGATGGACCCGGGAAGTGCGAGAACGTTCGACATCAAATACTTCGATCTCATCCTGAAGAGAAGAGGGCTCTTCACTTCGGACGCTGCACTTCTCGATGACAAACAAACC AAGGCGTACCTTGACTTCCAGATCAAGACCGGTGGATCCACTTTCTTCAAGGACTTTGGAGTGTCGATGGTGAAAATGGGTCGAATTGGCGTGCTCACCAAAACGGCTGGTGAAGTTAGA AAAGTGTGTACAAAGGTTAATTAA |
Retrieve as FASTA
|
|