View Redoxidase 8168

Entry information : EgrPrx[P]06

Entry ID	8168
Creation	2011-03-01 (Christophe Dunand)
Last sequence changes	2016-03-22 (Christophe Dunand)
Sequence status	theoretical translation / pseudogene
Reviewer	Achraf Jemmat
Last annotation changes	2016-03-22 (Achraf Jemmat)

Peroxidase information: EgrPrx[P]06

Name

EgrPrx[P]06

Class

Class III peroxidase [Orthogroup: Prx046]*

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrPrx[P]06 start..stop	S start..stop
EgrPrx[P]11	585	0	1..332	1..327
EglPrx[P]06	546	0	1..332	1..307
EguPrx12	436	6.76e-155	1..332	1..334
EgrPrx12	433	9.46e-154	1..332	1..334

Literature and cross-references EgrPrx[P]06

DNA ref.	Phytozome 12: scaffold_1 (437833..433071)

Protein sequence: EgrPrx[P]06

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	329 (309)
PWM (Da):	35386.62 (33246.5)
PI (pH):	5.14 (4.97)	Peptide Signal:	cut: 28 range:21-329

Sequence
Send to BLAST
Send to Peroxiscan

*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MTPSRLWQLL LAALAVVSSC *VQHNANAAA TMEPPQKLQW LYYQNSCPDA EKYVRDQVEF YSKQDRSLAL KLIRLLYSDC FVTGCNASIL LDGPIQNAAL LGLPMEMIDK VKEVLEQHCP GDLSCxDIIN LAAKDAVVLV GGTSYPIPTG RRDENSSSAK LVDLLPLQAV PWKAEPSYFK SKGLNVLVLT TLCGxxxxxx xTSCxSFIPD RLYDFNKTGE PDPSMDPTFL SQWSEQCPPN
STNIAYLNPD LGSSYSFGNS FYSRVRHHQA VLGINQQIAS NFDSSLIAWE YDVRFGDFQK MFGMSTIRMG NIKLLPEDQG *IRKNC*VVD GK

Retrieve as FASTA

Remarks

Pseudogene from genomic ( several stops in frame). No prediction from phytozome. No EST. Containing motif 'YSDC'.

DNA ►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATGACACCAT CAAGATTGTG GCAGTTGTTG CTAGCGGCGC TCGCGGTGGT GAGCTCATGC TAGGTGCAGC ACAATGCCAA CGCGGCAGCG ACAATGGAAC CGCCGCAGAA GCTGCAGTGG CTTTACTACC AGAACTCATG CCCTGACGCT GAGAAGTACG TGAGGGACCA GGTCGAGTTC TACTCGAAGC AGGACAGGAG CCTTGCTCTC AAGCTCATCC GACTGCTCTA CTCCGACTGC TTCGTCACCT TATGTGTCGT CTGTTTTTTT TCCCCTCTCT TGGACGATAT TGAAATCTGT ATCACTTCAA TATCAAGTTT CCATCACCTT TCTATGCACG TCATATCCTA ACGGTTTAAA CCTGTCGAAC TGGGCTTTCT AACGCTTGCT CAAAAAAAGA AAAGAAAAAG AACTGGGCTT TCTAACGTAC CACTCTTTTG CGTATAAAAC TCGGGTGCAA TGCGTCAATT CTATTGGACG GGCCTATTCA GAATGCAGCG CTTCTAGGGC TTCCTATGGA GATGATTGAC AAGGTCAAGG AAGTCCTGGA ACAGCATTGT CCCGGGGACC TCTCTTGCAC nGACATAATC AACCTCGCTG CTAAAGATGC TGTTGTCTTG GTATGCAACA TGGTTCGCAG TTTTTCCCTT TTGGGCTTGA AAAAAGATCG TTTAGGCTGC TCCACTAATA ATTGACATTG TGCGTTTGGT TCAGCATTTT CAAGGGGCTT TCAGCCCTGA AAGCCTCTTG GGGAAATGCT AGACCGTTTG GTTCAATTTT TTTGCTAGCT TTCAACTTTC AACTTACCTT CAAAATGTTA AAGGCCCAAA GCTAGTAGAG ACTAGCTTTT GGGCTTTTAG CATTAAGCGG AATGTTAAAA TTATTTTTTA TCTTCCAAAA CTACTCTCAC TAATTTTTCA TATTTTCGAT TTTGTCCCTA TTTATGTCTT ATTTTTTTTA TTGAAAAATG AGGCAGCCCT TCGCCGGACC GACGAAGGGC TACGGCCGCC GGCGAGCCAG ATCTAGCATC TACAGCCATG GCTGAGGTCG CTTGAGGTCG GACAACCTTC AACGAGGGTT GTGCGACCCA ACTGAGGGCC GCGAGACTCA AGCGGCGGTT GCCTAGGTCA CACGACCCTC GCCGAGGGTC GCTCAACCTC GAGCGACCTC TAGCGGCCCT CGGCTAGGTC GCACAACCCT CGCTGAGGGT CGCCCGAGGT CGGGCGACCT TCGGCGGCCC TCAACTAGGT CGCGCGACCC TTGCCGAAGG TCGCCTAGGG TCGGGCGACC TTAGCTGACG GCCGGCGGCG GCCATAGCCC TTCGCTGGTT TGACGAAGGG TTTAGTTTAA TTTTCAAAAA TAAAAATAAA AGTATATATA ATTATATACC CATCAAAGCT CATTGGGAAA GTTTTCTTTA CCAAACTCAC ATTCAACTCA AAGACCATTT GCAAAAAAAA TTTACCAAAC ACAATTGCAT TTCTCCAAGT AAATTTGGGC TTTCAGCATT TGCATTGAAC TCAAAACCTA TTGCAAATGC TGAACCAAAC GCGGTCACTG TCAACTTGAG TTTTAGAGCG TTTGATATGG AGAAAAATTA GAATTACTAA TGCAATAATG ATGTTGTAAC AAGTGGGAGG GACGTCGTAC CCCATTCCAA CGGGGAGGAG GGATGAGAAT TCATCCTCCG CGAAGTTGGT GGACCTCCCA TTTATGCCAT GTTTGGTAAC GGGTTAAATA GTAAAAAAAT TTATTCTTTT GTTCTGGGGA GTAGTTTTGG AACAGAATCA TATTTAGTAA AATTTTTGTT CCCAGAAACA AATTTTTATT TTTTTGTTCA CGGAAGTAGA TTTGGAATAT AATCAAGAAT GAAAAAGAAA AAGTTGATTC TTCTTTCCAA GAACAATTCT AGAATTAAGT TCATATTTTC CTTTTTATTT TCTTTTTCTT TGTTCTTCTT CCATTTTCTT CTTCTTCATC TATTGCCACC GCCGCCATTG CCGTCCGCCA CCCACTGTTG CTGGTTGCCG ACAACTGGTT CGGCGAGGCG GGTGAGGCTC GCCCAACCCC GGCGAGGGTT AGCCAGCCTC GACTAGGCTC AACCGAGTTC ACCCAGCCGT CAACGGGGCT CGACCTCGCC AAGCCATCGC GAGGTCAGCC TCACCTAGGG TGGTGGGCTT CACAATGCTA AGATGGGTTT CGAAAGGCGA TGGCAGGGAA GCTAACGCCC ATTAGGGTAC CTAGGGTGGT GCTCTAGTCA TGGAAGAAAG AACCTGTGGG CTTCCCCTGC CATTCGCATG AAGCAAAAGA ATAGCATAAC CGCAGCACGA TGACAATGGC TGCTCTnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnGGC CTTGCTAGAA CTGGGGGCGA GGCCGCTCCA CCCAGCCATG GCTCGACCGA CGAGGGCTGG CGATGCTTTG GTGAGGTCGT TGGCCCTCAT CTGGCCCAGT TGTTAGTCAT CGTAAGGCTG GCAACTGGCC ATTTAAAGAA GAAGAATAGG AAAGAAAAAA AAGAAGGAAA AAGTAAAAAA GTAATAACAT TATTTAAAAA TTAAAAGAAA ATGATTTGGA GTAGGAATTT TGAGTACAGT ACCAAACGCA ATTTTATTTC GGGAATTGAA ATTTTGGACA GTTACCAAAC AACTTAAAAT ACTTAAAAAT TGTTCTTGGA AACAGAATAA AAGAGAATCA ATTCTGATAA GAAATTGTTT CTGAGAACAG AAGCGTTACC AAACGCACCC TTAGAGTGGG TCTTAGACCT ATATATGACC CATTTAAATT ATAAATTGGT CATATATGGA TCACTTATTT TTTGAAGAAA CTAGTTAAAT GGATTTAAAA ATTAAAGACT TAAGATAAAT TGGTTTTAAT TTTTAAATGG GTCTTAAACG GGTTGGACTT AGAACCCATT TTCAACCAAA ACCTCACAAT CTCCATCTTC CCTCTTTAAC TTTATGAAAT TATTTTTAAA CAAAGATCAA AATTATAATT ATTTTTTATA TTTTAATTTT CTTTTTTCTT TCCTTCTTCC TCTTTCTTTA GCTGATGGCC AGCATGGCAA TTGGCCAAGT GAGGCTTGAG CTCATTGGCC TCAGGCGTGG CTCAAGCCTC GCCAGATCCA GCAATGGGCG AGCTCGAGCC TCGTCGATCT AGCGAGCCTT GAGCGAGCTA GATGAGCTCA AGGCTTGCCT GTGGCTGGTA GCCAGCTGTC GTCATGGTCG ACGACCGGCC ATAGAAGAAG AAAAACAAAA AACAAAAAAC AAAAGGAAAA TTAAAAATTA TATTCTTAAA AAATATAAAA ATTGTCCATT AAATTTATAT TGGATAAAAT TATTTTAGCA ATACCATTTA AAAAAATGAT AAGAAATAAT TTTTCTTAAG TTTAGTTAAA TGGGTCAGAT ATGGGTTAGG TCGGGTATGG GTAAAAAACT TTGCACTACA ATAAATCGGT CATAAACGGG TTAAATAGAT CGAATTGGGT CGGACCATTT ATGACCCGAT CCACCAATTT AACGGATCTA CTTCCATTGC AGGCCGTCCC GTGGAAAGCG GAGCCCAGTT ACTTCAAATC AAAGGGTTTG AATGTGCTAG TCCTCACTAC TCTATGTGGT GTCATTTGAC CCTCACAAAT TTGACCGGGA CCTCATTATA TCACCTTAGA TCTTAACCAA TCCAGGCAAA TCGTTTAGTT TAGTGGATCG CAACGTCTTT TTTTGCTTTT AAGTTTTGTA AGTCGCTGCC TAATTGTCAC GATACAAAGA ATTTTATCAG ATATAGTATT GTCGAGGATA TAATCTGAGC CCCAATACTC ACTATGATCT CCTCCCAGTG CACAAAATGG CAATGCTCAC GTATTATGTC AATCTCAGAA TCATAGCCAA AATCCTAACT TGCCGAAACA ATTTAAATTT TCCCnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnACCAGT TGCnnnAGCT TCATCCCGGA CAGGTTGTAC GATTTCAACA AAACTGGCGA GCCAGACCCA AGCATGGACC CAACCTTCTT GTCACAATGG AGCGAGCAAT GCCCTCCGAA CTCAACGAAT ATAGCGTACC TCAACCCTGA CTTAGGCTCG AGCTACAGCT TCGGCAATTC CTTCTACTCA AGGGTACGGC ACCACCAGGC GGTCCTCGGC ATCAACCAGC AGATCGCTAG CAACTTCGAC AGCTCCCTGA TCGCTTGGGA GTATGATGTC AGATTCGGGG ACTTCCAGAA GATGTTCGGC
ATGTCAACAA TCCGGATGGG GAACATCAAG CTCCTACCGG AGGATCAGGG GTAGATTCGC AAGAATTGCT GAGTCGTGGA CGGGAAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

Retrieve as FASTA