Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
320 (294) |
PWM (Da): |
34585.45 (31477.8) |
|
PI (pH): |
7.94 (7.36) |
Peptide Signal: |
cut: 27 range:27-320 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MIFYLRFHCS FYLSLLVFSL IRLSSARLSA DYYEKSCPKA IYTIKNAVTN AVAKERRMGA SLLRLHFHDC FVNGCDASIL LDDTSDFTGE KTAKPNSNSL RGFDLIDTIK SQVEKLCPGI
VSCADIIAIA ARDSVEILGG STWNVLLGRR DSTTASLSSA NSDIPSPLMD LSDLITKFDN KGFTAKEMVA LAGAHTIGQA QCTTFRERVY NETTIDSSLA TSLKSNCPST GGDDSLSALD
AATPAIFDNH YFKNLVKNKG ILHSDQQLFS GGSTDSQVTT YSTRPITFAA DFAKAIVKMG NLSPLTGTNG QIRTNCRKIN
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic and 1 EST. Uncorrect prediction from SGN, Edwards2017 (last exon only due to scaffold border), completed using TN90 (RNA_114398 gene_53583) |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGATCTTTT ATTTGCGATT CCATTGTAGT TTCTACTTGT CTCTGTTAGT ATTTTCACTA ATTAGACTCT CTTCAGCACG GTTGTCTGCG GACTACTATG AGAAATCTTG TCCAAAAGCT
ATTTATACCA TTAAAAATGC AGTGACAAAT GCTGTGGCGA AAGAGCGTCG AATGGGGGCC TCTTTACTCC GTCTTCATTT CCACGATTGC TTTGTTAATG CATGTTTCTC TCTAATACTT
TGCCTTTTGG TTTGCTTTTG TATATGTCTT GTGCATGCGC GGATTAATTG TGACATAGAT TTGTTTTTAA CACTCAATTT ATTATATATA AATTAAACTC GTGCGTGCAG GCGACACAAC
TAGCTAGTTG AACCAGAATT CACGAATTAC TTTAGAATAT AAAAATGCCG AAAACGAAAC AGACCAATTT GTTGTTGAAT AGTGTTGGTT TGCTGATCTG AAAATTTCGT TAAATTCGGC
CCAATTTATA TGTGAATTGC ATTTTTCCCA TTATATTCTA TAGTAAAATT ATAGGAAAAG AAGGAATTAC CAAGGGCTGT CACATGAACA AAAAATTAAC ATTTGAGACA AATGTCCTGG
ATGTATACGA AGTACGAACT AGTTTCTATC TTGCCCAAGT AGGATTATTG TTTCATATGT TATTTATTTA TTTAATTTGA AATAAATATT TGGGTCATTT GATTCTTATC ATAGCACATT
CTTCTTGTTT AACCCCCCCA AAAAAACGTC TTTGAGGGCA TTTGGACATA AGAATTATAA AATTTCGGAA AAAGTTTTAA AAAAAATTAG GTGAAAATAA TATTTAAAAA TTAGAGTTGT
GTTTGGACAT GAATATAATT TTGGGCAGTT TTTTAATTTT AGTGAGTGAT CTGAAGTGAA AATTTTGAAA AATAACTTTT TGGAGTTTTT TCAAATTTTT GAAAAATTCC GAAATTAATC
TTCAAGTGAA AATCGAATAT TTTATGGTCA AACACTGATT TCGAAAAAAA ATCAAAATAA ATTAAAAAAA AAAGAATCTT TTTTCATGGC CAAACAGGCC CTTTATGTAA AAGTAGAGCT
GGCCTGTTAC AACGATATTT TCTTTTTATA CAGACTATCA TGGCTAATAT TCATATTACA CTGAAAATAT CATCTTAATT ATTTATGATT GAAGAATATA CCAAGTAAAA AAGGGTTAAG
AATTAAAAAG TACTAAGTAA TATCTATTTT TGACAGGGAT GTGATGCATC GATACTACTG GATGATACTT CGGATTTCAC TGGAGAGAAG ACAGCAAAAC CAAATTCAAA TTCACTAAGA
GGTTTTGATT TGATTGATAC AATCAAGTCT CAAGTAGAGA AATTATGTCC TGGAATTGTT TCTTGTGCAG ATATTATAGC CATTGCAGCC CGAGACTCTG TTGAAATAGT AAGTACTTTA
ATCTTTATCT TTCTTCTGCT AAACAATTTT ATAATTTCCT CTATTCAATT TCAACATCAA CAAGTTTATG ATTTCTTCTA TTCAATTTCA ACATCCTTAA GGATTTGGGA CCGTATATAA
TCATTATATA ATTTTCGTAA TTCGGCTAGA AAAAATATAC GGTAAATCTG GATGGCTATT TGTGTAAAGA TCTTTGGGCT TTTTTCACTT TTAGCCCACG CAAGAAACTA TTTACACTTG
GTAGTCGAAA AAAGTGTATA AAATTTGTAT AATTTTTATA TATAACATAT ATATATATAT nGTTCGAATT TTTTGTATGT GAGCTTCCAG CATAATATAC TGGAACTCCA GTATAATATG
CTGGAAGTTC ATACACAGGT GCTCCAATTT CCGTATATTA TGCTGGAATT TTCTGTGCTG GATTATGCTG GAAGTTCATA CATAGGTGCA CCAATCTAAA GTATATTATA CTGGAATTTT
CCGTGTTGCA GCAAAATAAT GTCTATTTTT CAATAATTTT GCAAATATTG GTTATTTTTT AATTACTAAT CCAAAAAATA GCTAGCCCGT GCTATTTTCA CATATTTATA GCTCATTGAA
GTTCCTTTGG GCTTGGTGCA GCTTGGTGGG TCTACTTGGA ATGTCCTATT AGGTAGAAGA GATTCTACAA CAGCAAGTTT AAGTTCAGCA AATAGTGATA TTCCTTCTCC TTTAATGGAT
CTTAGTGACC TAATTACTAA ATTTGACAAT AAAGGCTTCA CTGCTAAAGA AATGGTTGCC CTTGCAGGTA ATTAACAACT CTTTTATTTT TCCAGTTTTA AAAACATTTT GTGTAATTTA
TTATCGTTTT AGAAATAATT TGGAATGCGT ACTTGGGCTC GAATAGAACA GAATATAAGC TGGTTTAAGC ATTTTTTTCC GCTTATTTAC TCGTTTGGTA AATACCAAAC TTATACACCA
AGTACTTTAA ATTTGTGATT TTTTCGCTTA TAAATACTTT TACTTTAATC AAAAATTTTA TTATTTTATT TCTAATATTT ATAATTTTCG AAACTCACTA TCCATTCTAC TTATATCGTT
CTTCTTTCTC CTTGTAAAAG TACTTTTTAT GTTAATATAA ATAATTTCGA AGAAATTTTG ATCATTCTAA GAGAAAAATA TTTATTAGCA TACTTTTACC AAATATATCA ATTGTTTATT
ATCTCTTTCA GTAATTCAGA ATACATAACT GCTTCTTTAT ACAATTAGTT TCAGCATTAT GTTCATGAAC TATTTTTAAT CAACTAAGCC AAACGTATTC TAAATACAAA AATTCGAAAA
TTAAGAGATC TTGATCATTC TAAGAGAAAA ATATTTATCA GCATACTTTT ATCAAATATA TCAATTGTTT ATTATCTCTT TCATTAATTA AAAATACATA ATTGCTAAAA TTCGTATATT
CGAATTCCCA ACTATTTCGG AGATGACGTA TATATAGTTG ATTGATTAAT TGATTTATCT CGAAAAATTT CCAGGTGCTC ACACCATAGG TCAAGCACAA TGTACAACAT TTAGGGAACG
TGTGTACAAC GAAACAACCA TCGATTCATC GTTGGCTACA TCGTTGAAAT CAAACTGTCC GAGTACAGGT GGAGATGACA GCCTTTCTGC ACTTGATGCA GCCACCCCTG CAATATTTGA
CAACCATTAT TTCAAAAACT TGGTTAAAAA TAAAGGGATT CTTCACTCAG ACCAACAGTT ATTTAGCGGT GGTTCTACGG ACTCTCAAGT TACTACTTAC AGTACTCGTC CTATAACATT
TGCTGCAGAT TTTGCAAAGG CTATTGTCAA AATGGGAAAC TTAAGCCCAC TTACTGGAAC CAATGGCCAA ATTCGTACTA ATTGCAGGAA AATCAACTAA
|
Retrieve as FASTA
|
|